Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00005540 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 4.2e-219 764.6 450 100.0
Cre05.g234657 Chlamydomonas reinhardtii HOM05D004609 ORTHO05D005537 7.6e-27 125.9 206 40.8
CBR_g359 Chara braunii HOM05D004609 ORTHO05D005537 2.5e-09 67.8 139 35.3
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 3.2e-09 67.4 141 33.3
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 7.1e-09 66.2 139 34.5
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 9.3e-09 65.9 143 34.3
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 1.2e-08 65.5 141 31.9
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 2.1e-08 64.7 140 34.3
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 2.7e-08 64.3 212 30.2
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 4.6e-08 63.5 143 32.2
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 6.1e-08 63.2 143 32.2
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 7.9e-08 62.8 143 32.2
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 7.9e-08 62.8 140 33.6
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 7.9e-08 62.8 140 33.6
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 1.0e-07 62.4 141 31.9
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 1.3e-07 62.0 139 33.1
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 1.3e-07 62.0 202 30.7
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 1.3e-07 62.0 140 32.1
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 1.3e-07 62.0 202 29.7
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.8e-07 61.6 141 33.3
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 2.3e-07 61.2 146 30.8
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 3.0e-07 60.8 141 33.3
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 3.0e-07 60.8 141 33.3
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 3.0e-07 60.8 144 34.7
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 3.0e-07 60.8 212 29.2
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 3.9e-07 60.5 140 32.1
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 3.9e-07 60.5 141 33.3
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 3.9e-07 60.5 141 32.6
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 3.9e-07 60.5 141 30.5
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 3.9e-07 60.5 140 32.1
Haze_26358 Corylus avellana HOM05D004609 ORTHO05D005537 5.1e-07 60.1 131 33.6
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 5.1e-07 60.1 205 28.3
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 5.1e-07 60.1 141 31.2
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 5.1e-07 60.1 141 30.5
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 6.7e-07 59.7 139 31.7
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 6.7e-07 59.7 141 33.3
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 8.7e-07 59.3 140 30.7
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 8.7e-07 59.3 206 28.2
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 8.7e-07 59.3 201 29.4
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 1.1e-06 58.9 139 31.7
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 1.1e-06 58.9 139 31.7
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 1.1e-06 58.9 139 32.4
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 1.1e-06 58.9 201 28.9
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 1.1e-06 58.9 141 31.2
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 1.5e-06 58.5 139 32.4
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 1.5e-06 58.5 140 31.4
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 1.5e-06 58.5 136 34.6
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 1.5e-06 58.5 139 32.4
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 1.5e-06 58.5 139 32.4
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 1.9e-06 58.2 139 33.1
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 1.9e-06 58.2 205 29.3
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 2.5e-06 57.8 206 27.7
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 2.5e-06 57.8 139 31.7
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 2.5e-06 57.8 206 27.7
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 2.5e-06 57.8 139 32.4
MCO01G111 Micromonas commoda HOM05D004609 ORTHO05D005537 2.5e-06 57.8 141 31.2
vmacro03196 Vaccinium macrocarpon HOM05D004609 ORTHO05D005537 2.5e-06 57.8 140 30.7
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 3.3e-06 57.4 140 30.7
Ca_29294_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 3.3e-06 57.4 168 29.8
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 3.3e-06 57.4 139 30.9
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 3.3e-06 57.4 139 32.4
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 3.3e-06 57.4 139 30.9
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 4.3e-06 57.0 143 29.4
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 4.3e-06 57.0 139 30.9
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 4.3e-06 57.0 139 31.7
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 4.3e-06 57.0 140 30.0
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 5.7e-06 56.6 138 30.4
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 5.7e-06 56.6 140 30.0
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 7.4e-06 56.2 139 31.7
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 7.4e-06 56.2 140 30.7
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 7.4e-06 56.2 199 28.6
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 7.4e-06 56.2 140 30.7
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 7.4e-06 56.2 139 31.7
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 9.7e-06 55.8 140 30.7
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 9.7e-06 55.8 139 30.9
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 9.7e-06 55.8 139 30.9


User provided reference genes

Program Settings