Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00005439 Prasinoderma coloniale HOM05D005576 ORTHO05D007010 0.0e+00 1723.0 981 100.0
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 3.1e-41 174.9 1001 27.2
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 1.1e-35 156.4 958 24.8
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 4.4e-35 154.5 931 25.9
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 1.3e-34 152.9 952 26.1
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.9e-30 139.0 942 26.0
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 1.4e-28 132.9 946 24.6
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 5.2e-28 131.0 587 24.2
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 2.0e-27 129.0 932 22.9
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 2.6e-27 128.6 922 24.5
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 4.4e-27 127.9 929 23.5
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 5.7e-27 127.5 953 25.5
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 1.3e-26 126.3 932 23.5
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 1.7e-26 125.9 586 25.4
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 3.7e-26 124.8 581 25.1
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 3.7e-26 124.8 581 25.1
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 3.7e-26 124.8 961 23.9
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 8.2e-26 123.6 585 23.6
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 1.1e-25 123.2 929 24.1
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 1.1e-25 123.2 929 24.2
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 1.1e-25 123.2 923 22.9
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 1.4e-25 122.9 946 23.0
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 1.4e-25 122.9 926 23.9
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 1.8e-25 122.5 1119 27.1
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 3.1e-25 121.7 948 23.5
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 7.0e-25 120.6 939 23.3
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 1.2e-24 119.8 949 23.5
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 1.6e-24 119.4 956 23.7
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 2.0e-24 119.0 563 24.2
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 2.6e-24 118.6 946 22.8
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 3.5e-24 118.2 946 23.2
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 4.5e-24 117.9 910 23.7
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 5.9e-24 117.5 933 23.2
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 5.9e-24 117.5 587 23.7
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 1.0e-23 116.7 520 25.4
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 1.3e-23 116.3 930 22.8
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 1.3e-23 116.3 581 24.4
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 1.7e-23 115.9 932 23.5
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 2.2e-23 115.5 580 23.8
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 2.9e-23 115.2 934 22.9
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 5.0e-23 114.4 937 23.2
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 5.0e-23 114.4 951 23.6
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 6.5e-23 114.0 931 23.5
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 8.5e-23 113.6 933 23.7
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 1.5e-22 112.8 931 23.1
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 1.5e-22 112.8 937 22.7
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 1.9e-22 112.5 946 23.9
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 1.9e-22 112.5 946 23.8
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 2.5e-22 112.1 931 23.5
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 3.2e-22 111.7 948 23.4
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 3.2e-22 111.7 930 23.0
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 3.2e-22 111.7 931 23.4
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 3.2e-22 111.7 915 23.2
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 5.5e-22 110.9 935 22.9
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 5.5e-22 110.9 950 23.7
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 7.2e-22 110.5 642 22.6
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 2.7e-21 108.6 946 23.7
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 3.6e-21 108.2 930 22.8
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 3.6e-21 108.2 946 23.7
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 3.6e-21 108.2 932 22.3
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 3.6e-21 108.2 951 22.5
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 4.7e-21 107.8 551 23.6
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 4.7e-21 107.8 945 23.4
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 4.7e-21 107.8 1025 27.2
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 4.7e-21 107.8 913 23.0
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 6.1e-21 107.5 950 22.7
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 1.4e-20 106.3 946 22.7
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 1.8e-20 105.9 946 22.7
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.8e-20 105.9 968 23.6
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 2.3e-20 105.5 967 23.9
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 3.0e-20 105.1 949 22.0
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 3.0e-20 105.1 971 24.0
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 4.0e-20 104.8 929 22.8
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 4.0e-20 104.8 931 22.2
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 5.2e-20 104.4 954 23.2
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 6.7e-20 104.0 568 23.2
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 6.7e-20 104.0 936 22.5
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 6.7e-20 104.0 962 22.8
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 8.8e-20 103.6 561 22.8
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 1.2e-19 103.2 958 22.9
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 1.2e-19 103.2 953 23.5
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 2.0e-19 102.4 933 22.5
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 2.0e-19 102.4 933 22.6
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 2.6e-19 102.1 844 22.9
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 5.7e-19 100.9 958 22.9
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 5.7e-19 100.9 929 22.1
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 7.5e-19 100.5 906 23.2
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 2.2e-18 99.0 945 22.8
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 2.2e-18 99.0 969 22.7
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 2.2e-18 99.0 958 23.1
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 3.7e-18 98.2 917 22.9
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 4.8e-18 97.8 937 22.6
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 4.8e-18 97.8 976 23.1
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 4.8e-18 97.8 914 21.9
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 6.3e-18 97.4 951 21.8
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 1.1e-17 96.7 911 21.8
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.8e-17 95.9 973 22.4
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 7.0e-17 94.0 981 22.7
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 1.2e-16 93.2 984 22.9
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 1.2e-16 93.2 977 23.1
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 4.5e-16 91.3 977 23.1
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 5.9e-16 90.9 949 22.0
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 5.9e-16 90.9 935 22.4
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 7.7e-16 90.5 954 21.5
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 7.7e-16 90.5 954 21.5
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 1.0e-15 90.1 960 22.1
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 1.0e-15 90.1 937 21.1
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 1.1e-14 86.7 978 23.3
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 1.1e-14 86.7 946 21.1
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 3.2e-14 85.1 429 24.2
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 3.2e-14 85.1 815 24.2
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 4.2e-14 84.7 978 23.2
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 4.2e-14 84.7 978 23.1
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 4.7e-13 81.3 836 21.7
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 1.4e-12 79.7 958 21.9
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.8e-12 79.3 344 23.8
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 2.3e-12 79.0 299 25.1
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 5.7e-11 74.3 989 21.6
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 5.7e-11 74.3 852 22.5
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 2.2e-10 72.4 753 22.7
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 1.1e-09 70.1 943 21.5
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 1.8e-09 69.3 246 23.2
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 7.0e-09 67.4 176 30.7


User provided reference genes

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