Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00005024 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 1.3e-131 473.0 233 100.0
Atru.chr4.2894 Acer truncatum HOM05D004309 ORTHO05D005588 5.1e-59 231.9 231 52.4
Eucgr.C01303 Eucalyptus grandis HOM05D004309 ORTHO05D005588 7.4e-58 228.0 231 51.5
BcaC07g37940 Brassica carinata HOM05D004309 ORTHO05D005588 1.3e-57 227.3 231 51.1
Prupe.1G125100 Prunus persica HOM05D004309 ORTHO05D005588 2.1e-57 226.5 233 52.4
Thecc.04G288300 Theobroma cacao HOM05D004309 ORTHO05D005588 2.1e-57 226.5 231 51.5
Hund24883 Selenicereus undatus HOM05D004309 ORTHO05D005588 2.8e-57 226.1 227 52.9
BolC8t48324H Brassica oleracea HOM05D004309 ORTHO05D005588 3.7e-57 225.7 230 50.9
Thhalv10026185m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 3.7e-57 225.7 231 50.2
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 3.7e-57 225.7 233 51.1
Sabra10G0006000 Salix brachista HOM05D004309 ORTHO05D005588 3.7e-57 225.7 232 50.9
Sp7g14390 Schrenkiella parvula HOM05D004309 ORTHO05D005588 3.7e-57 225.7 231 50.2
A08p12070 Brassica napus HOM05D004309 ORTHO05D005588 6.2e-57 224.9 230 50.9
BraA08t33198Z Brassica rapa HOM05D004309 ORTHO05D005588 6.2e-57 224.9 230 50.9
Duzib212G0876 Durio zibethinus HOM05D004309 ORTHO05D005588 6.2e-57 224.9 235 51.5
Manes.03G198200 Manihot esculenta HOM05D004309 ORTHO05D005588 6.2e-57 224.9 231 50.6
AL7G39330 Arabidopsis lyrata HOM05D004309 ORTHO05D005588 8.1e-57 224.6 231 49.8
Carub.0007s2572 Capsella rubella HOM05D004309 ORTHO05D005588 8.1e-57 224.6 231 50.2
ATR0150G025 Amborella trichopoda HOM05D004309 ORTHO05D005588 1.4e-56 223.8 235 50.6
QL06p010180 Quercus lobata HOM05D004309 ORTHO05D005588 1.4e-56 223.8 229 50.7
BcaB04g18344 Brassica carinata HOM05D004309 ORTHO05D005588 1.8e-56 223.4 230 50.4
CANSAT78G0198 Cannabis sativa HOM05D004309 ORTHO05D005588 1.8e-56 223.4 227 52.0
Cc03_g01580 Coffea canephora HOM05D004309 ORTHO05D005588 1.8e-56 223.4 228 52.2
GSVIVG01035117001 Vitis vinifera HOM05D004309 ORTHO05D005588 1.8e-56 223.4 233 51.5
Potri.010G011000 Populus trichocarpa HOM05D004309 ORTHO05D005588 2.4e-56 223.0 232 50.4
Aqoxy2G02913 Aquilegia oxysepala HOM05D004309 ORTHO05D005588 3.1e-56 222.6 231 49.8
CARHR290520 Cardamine hirsuta HOM05D004309 ORTHO05D005588 3.1e-56 222.6 231 49.4
AT4G15940 Arabidopsis thaliana HOM05D004309 ORTHO05D005588 4.0e-56 222.2 231 50.2
Sc19g0005430 Simmondsia chinensis HOM05D004309 ORTHO05D005588 4.0e-56 222.2 229 52.4
Actinidia00004 Actinidia chinensis HOM05D004309 ORTHO05D005588 5.3e-56 221.9 228 50.9
CSS0011476 Camellia sinensis var. sinensis HOM05D004309 ORTHO05D005588 6.9e-56 221.5 229 51.1
Ciclev10005665m.g Citrus clementina HOM05D004309 ORTHO05D005588 9.0e-56 221.1 259 45.9
Hma1.2p1_0078F.1_g040370 Hydrangea macrophylla HOM05D004309 ORTHO05D005588 9.0e-56 221.1 229 51.5
Dinv29733 Davidia involucrata HOM05D004309 ORTHO05D005588 1.2e-55 220.7 233 50.6
Nitab4.5_0000695g0040 Nicotiana tabacum HOM05D004309 ORTHO05D005588 1.2e-55 220.7 227 52.4
Nitab4.5_0006814g0040 Nicotiana tabacum HOM05D004309 ORTHO05D005588 1.2e-55 220.7 227 52.4
arahy.Tifrunner.gnm1.ann1.9V15EM Arachis hypogaea HOM05D004309 ORTHO05D005588 1.5e-55 220.3 231 50.2
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 2.0e-55 219.9 231 50.2
Gohir.A01G033033 Gossypium hirsutum HOM05D004309 ORTHO05D005588 2.6e-55 219.5 235 50.2
Psat4g026320 Pisum sativum HOM05D004309 ORTHO05D005588 3.4e-55 219.2 229 48.5
Gohir.D01G023490 Gossypium hirsutum HOM05D004309 ORTHO05D005588 5.8e-55 218.4 235 50.2
Gorai.002G028600 Gossypium raimondii HOM05D004309 ORTHO05D005588 7.6e-55 218.0 235 50.2
Sopen01g028230 Solanum pennellii HOM05D004309 ORTHO05D005588 7.6e-55 218.0 227 52.0
Lalb_Chr07g0182331 Lupinus albus HOM05D004309 ORTHO05D005588 9.9e-55 217.6 233 48.9
THA.LOC104802581 Tarenaya hassleriana HOM05D004309 ORTHO05D005588 9.9e-55 217.6 229 50.2
Solyc01g066480.3 Solanum lycopersicum HOM05D004309 ORTHO05D005588 1.3e-54 217.2 227 52.0
SGA_v2.0_scaffold91G28010 Striga asiatica HOM05D004309 ORTHO05D005588 1.3e-54 217.2 224 51.8
CiPaw.01G145800 Carya illinoinensis HOM05D004309 ORTHO05D005588 1.7e-54 216.9 230 50.4
CBR_g26355 Chara braunii HOM05D004309 ORTHO05D005588 1.7e-54 216.9 229 50.7
PSO407G0025 Papaver somniferum HOM05D004309 ORTHO05D005588 1.7e-54 216.9 226 50.9
PSO444G0002 Papaver somniferum HOM05D004309 ORTHO05D005588 1.7e-54 216.9 226 50.9
Rhsim04G0225000 Rhododendron simsii HOM05D004309 ORTHO05D005588 1.7e-54 216.9 224 50.9
unitig_749.g13387 Utricularia gibba HOM05D004309 ORTHO05D005588 1.7e-54 216.9 226 50.4
AagrBONN_evm.TU.Sc2ySwM_344.4111 Anthoceros agrestis HOM05D004309 ORTHO05D005588 2.2e-54 216.5 231 51.1
PSO170G6503 Papaver somniferum HOM05D004309 ORTHO05D005588 2.2e-54 216.5 226 50.9
SalBow5G3240 Salvia bowleyana HOM05D004309 ORTHO05D005588 2.2e-54 216.5 226 50.9
HPP92_010682 Vanilla planifolia HOM05D004309 ORTHO05D005588 2.2e-54 216.5 227 49.8
CAN.G1639.2 Capsicum annuum HOM05D004309 ORTHO05D005588 2.9e-54 216.1 227 52.0
Migut.N00082 Erythranthe guttata HOM05D004309 ORTHO05D005588 2.9e-54 216.1 226 51.3
HanXRQChr06g0173801 Helianthus annuus HOM05D004309 ORTHO05D005588 2.9e-54 216.1 223 51.6
PGR031G0395 Punica granatum HOM05D004309 ORTHO05D005588 3.8e-54 215.7 233 50.2
TPR.G3211 Trifolium pratense HOM05D004309 ORTHO05D005588 4.9e-54 215.3 227 49.3
CDE11G0079 Ceratophyllum demersum HOM05D004309 ORTHO05D005588 6.4e-54 214.9 228 51.8
FvH4_4g18580 Fragaria vesca HOM05D004309 ORTHO05D005588 8.4e-54 214.5 224 51.3
vmacro08183 Vaccinium macrocarpon HOM05D004309 ORTHO05D005588 8.4e-54 214.5 232 50.0
ECA246G0235 Erigeron canadensis HOM05D004309 ORTHO05D005588 1.1e-53 214.2 223 51.1
Glyma.07G245900 Glycine max HOM05D004309 ORTHO05D005588 1.4e-53 213.8 229 49.3
Lsat_1_v5_gn_3_24101 Lactuca sativa HOM05D004309 ORTHO05D005588 1.4e-53 213.8 223 50.7
TAR633G1513 Trochodendron aralioides HOM05D004309 ORTHO05D005588 1.4e-53 213.8 229 49.8
VMungo1215G2421 Vigna mungo HOM05D004309 ORTHO05D005588 1.4e-53 213.8 229 49.3
DCAR_023296 Daucus carota HOM05D004309 ORTHO05D005588 1.9e-53 213.4 236 50.4
Os03g0829000 Oryza sativa ssp. japonica HOM05D004309 ORTHO05D005588 1.9e-53 213.4 228 48.7
Cfa015422 Carpinus fangiana HOM05D004309 ORTHO05D005588 2.4e-53 213.0 230 50.0
ClCG05G006230 Citrullus lanatus HOM05D004309 ORTHO05D005588 2.4e-53 213.0 222 49.5
Sed0001785 Sechium edule HOM05D004309 ORTHO05D005588 3.2e-53 212.6 222 49.5
Glyma.17G028100 Glycine max HOM05D004309 ORTHO05D005588 4.2e-53 212.2 229 48.9
RcHm_v2.0_Chr4g0423181 Rosa chinensis HOM05D004309 ORTHO05D005588 7.1e-53 211.5 224 50.4
Zm00001eb063500 Zea mays HOM05D004309 ORTHO05D005588 9.3e-53 211.1 229 48.9
CsaV3_3G014840 Cucumis sativus L. HOM05D004309 ORTHO05D005588 1.2e-52 210.7 222 49.1
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 1.6e-52 210.3 229 48.9
Medtr4g120230 Medicago truncatula HOM05D004309 ORTHO05D005588 1.6e-52 210.3 229 48.5
Phvul.003G106800 Phaseolus vulgaris HOM05D004309 ORTHO05D005588 2.1e-52 209.9 229 48.9
Lj3A823G59 Lonicera japonica HOM05D004309 ORTHO05D005588 2.7e-52 209.5 229 48.9
Zm00001eb053490 Zea mays HOM05D004309 ORTHO05D005588 3.5e-52 209.1 229 48.0
Thhalv10021471m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 1.0e-51 207.6 229 48.0
EL10Ac3g06636 Beta vulgaris HOM05D004309 ORTHO05D005588 1.3e-51 207.2 217 47.9
Mapoly0093s0048 Marchantia polymorpha HOM05D004309 ORTHO05D005588 1.3e-51 207.2 219 50.2
Sed0024380 Sechium edule HOM05D004309 ORTHO05D005588 1.3e-51 207.2 219 48.9
MSTRG.24800 Avicennia marina HOM05D004309 ORTHO05D005588 2.3e-51 206.5 228 48.7
MELO3C006680.2 Cucumis melo HOM05D004309 ORTHO05D005588 3.0e-51 206.1 228 49.1
AL3G29630 Arabidopsis lyrata HOM05D004309 ORTHO05D005588 3.9e-51 205.7 229 48.0
Sp3g14970 Schrenkiella parvula HOM05D004309 ORTHO05D005588 1.9e-50 203.4 229 47.6
BcaB04g18345 Brassica carinata HOM05D004309 ORTHO05D005588 4.3e-50 202.2 233 48.5
Oeu053993.1 Olea europaea HOM05D004309 ORTHO05D005588 7.4e-50 201.4 262 43.5
Aa31LG8G3800 Aethionema arabicum HOM05D004309 ORTHO05D005588 9.6e-50 201.1 231 46.3
Carub.0003s1643 Capsella rubella HOM05D004309 ORTHO05D005588 9.6e-50 201.1 229 46.3
A08p12080 Brassica napus HOM05D004309 ORTHO05D005588 1.6e-49 200.3 231 47.6
BraA08t33199Z Brassica rapa HOM05D004309 ORTHO05D005588 1.6e-49 200.3 231 47.6
Pp3c9_26130 Physcomitrium patens HOM05D004309 ORTHO05D005588 2.1e-49 199.9 220 46.8
SEGI_31265 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 2.1e-49 199.9 216 49.1
C01p47650 Brassica napus HOM05D004309 ORTHO05D005588 2.8e-49 199.5 229 46.7
Aa31LG10G6200 Aethionema arabicum HOM05D004309 ORTHO05D005588 6.2e-49 198.4 279 41.6
BcaC09g48622 Brassica carinata HOM05D004309 ORTHO05D005588 6.2e-49 198.4 229 46.3
BolC1t04737H Brassica oleracea HOM05D004309 ORTHO05D005588 6.2e-49 198.4 229 46.3
A01p37620 Brassica napus HOM05D004309 ORTHO05D005588 8.2e-49 198.0 229 46.3
BraA01t03822Z Brassica rapa HOM05D004309 ORTHO05D005588 1.1e-48 197.6 229 45.9
Lj6A680G88 Lonicera japonica HOM05D004309 ORTHO05D005588 9.0e-48 194.5 229 46.7
TWI09G0267 Tripterygium wilfordii HOM05D004309 ORTHO05D005588 1.2e-47 194.1 234 46.6
AUR62025637 Chenopodium quinoa HOM05D004309 ORTHO05D005588 3.8e-46 189.1 227 44.5
AUR62001364 Chenopodium quinoa HOM05D004309 ORTHO05D005588 1.4e-45 187.2 225 44.0
Nn3g21534 Nelumbo nucifera HOM05D004309 ORTHO05D005588 6.0e-44 181.8 228 45.6
EL10Ac7g18188 Beta vulgaris HOM05D004309 ORTHO05D005588 7.9e-44 181.4 223 42.6
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 5.1e-43 178.7 197 48.2
SMO347G0543 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 7.4e-42 174.9 232 42.2
HPP92_010660 Vanilla planifolia HOM05D004309 ORTHO05D005588 2.8e-41 172.9 189 47.6
Ah.08g217630 Amaranthus hybridus HOM05D004309 ORTHO05D005588 4.8e-41 172.2 229 42.8
AUR62018079 Chenopodium quinoa HOM05D004309 ORTHO05D005588 2.9e-38 162.9 188 46.3
Cpa.g.sc50.169 Carica papaya HOM05D004309 ORTHO05D005588 5.9e-31 138.7 130 56.2
Peaxi162Scf00065g01425 Petunia axillaris HOM05D004309 ORTHO05D005588 6.5e-30 135.2 123 58.5
FAN07G2872 Fragaria x ananassa HOM05D004309 ORTHO05D005588 7.2e-29 131.7 149 52.3
FAN12G2807 Fragaria x ananassa HOM05D005069 ORTHO05D006024 7.2e-29 131.7 150 48.0
Eucgr.C01444 Eucalyptus grandis HOM05D004309 ORTHO05D005588 7.9e-28 128.3 134 47.8
Cfa022490 Carpinus fangiana HOM05D004309 ORTHO05D005588 2.3e-27 126.7 150 44.0
FAN12G1798 Fragaria x ananassa HOM05D004309 ORTHO05D005588 3.9e-27 125.9 129 51.2
Duzib151G0762 Durio zibethinus HOM05D004309 ORTHO05D005588 5.9e-23 112.1 150 44.7
Haze_27427 Corylus avellana HOM05D004309 ORTHO05D005588 2.9e-22 109.8 210 34.8
Thhalv10026938m.g Eutrema salsugineum HOM05D004309 ORTHO05D005588 1.9e-21 107.1 123 46.3
AT3G16700 Arabidopsis thaliana HOM05D004309 ORTHO05D005588 1.2e-20 104.4 107 50.5
Ciclev10006277m.g Citrus clementina HOM05D004309 ORTHO05D005588 1.0e-19 101.3 92 55.4
Cre12.g549450 Chlamydomonas reinhardtii HOM05D004309 ORTHO05D005588 3.0e-19 99.8 200 36.0
SEGI_02276 Sequoiadendron giganteum HOM05D004309 ORTHO05D005588 1.5e-18 97.4 227 33.0
QL06p010208 Quercus lobata HOM05D004309 ORTHO05D005588 2.6e-18 96.7 165 37.6
Haze_27486 Corylus avellana HOM05D004309 ORTHO05D005588 1.7e-17 94.0 212 33.5
Hma1.2p1_0078F.1_g040630 Hydrangea macrophylla HOM05D004309 ORTHO05D005588 3.7e-17 92.8 91 56.0
Pp3s34_290 Physcomitrium patens HOM05D000879 ORTHO05D000265 3.7e-17 92.8 230 33.5
CARHR091950 Cardamine hirsuta HOM05D004309 ORTHO05D005588 1.1e-16 91.3 84 51.2
Pp3c6_20080 Physcomitrium patens HOM05D004309 ORTHO05D005588 1.8e-16 90.5 226 31.9
Sc26g0002580 Simmondsia chinensis HOM05D004309 ORTHO05D005588 1.6e-15 87.4 128 41.4
ATR0326G053 Amborella trichopoda HOM05D004309 ORTHO05D005588 2.6e-15 86.7 79 51.9
Ciclev10006783m.g Citrus clementina HOM05D004309 ORTHO05D005588 2.6e-15 86.7 83 49.4
SMO353G0001 Selaginella moellendorffii HOM05D004309 ORTHO05D005588 7.7e-15 85.1 225 29.8
PRCOL_00000256 Prasinoderma coloniale HOM05D004309 ORTHO05D005588 1.0e-14 84.7 235 31.1
MCO13G238 Micromonas commoda HOM05D004309 ORTHO05D005588 1.3e-14 84.3 196 33.2
Os03g0421700 Oryza sativa ssp. japonica HOM05D004309 ORTHO05D005588 2.9e-14 83.2 89 48.3
Prupe.1G124800 Prunus persica HOM05D004309 ORTHO05D005588 2.1e-12 77.0 65 52.3
AUR62024358 Chenopodium quinoa HOM05D002697 ORTHO05D003087 5.7e-10 68.9 66 50.0
Peaxi162Scf00454g00328 Petunia axillaris HOM05D004309 ORTHO05D005588 2.2e-09 67.0 64 57.8
Cpa.g.sc50.168 Carica papaya HOM05D004309 ORTHO05D005588 3.7e-09 66.2 49 59.2
GSVIVG01010688001 Vitis vinifera HOM05D004309 ORTHO05D005588 4.8e-09 65.9 55 52.7
RcHm_v2.0_Chr4g0423191 Rosa chinensis HOM05D004309 ORTHO05D005588 6.3e-09 65.5 65 49.2
Lsat_1_v5_gn_3_26221 Lactuca sativa HOM05D004309 ORTHO05D005588 1.8e-08 63.9 95 35.8
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 3.1e-08 63.2 72 44.4
Peaxi162Scf00267g00046 Petunia axillaris HOM05D004309 ORTHO05D005588 5.0e-06 55.8 40 65.0


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