Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 2.3e-168 595.5 307 100.0
MCO14G569 Micromonas commoda HOM05D033910 ORTHO05D034414 8.3e-33 145.2 303 32.0
Cre03.g205750 Chlamydomonas reinhardtii HOM05D033910 ORTHO05D034414 3.0e-27 126.7 331 27.8
Cre06.g293250 Chlamydomonas reinhardtii HOM05D033910 ORTHO05D142730 2.8e-20 103.6 134 38.1
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 8.9e-19 98.6 168 32.1
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 1.2e-18 98.2 134 34.3
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 9.8e-18 95.1 164 32.3
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 9.8e-18 95.1 164 32.3
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 9.8e-18 95.1 134 34.3
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 1.7e-17 94.4 134 33.6
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 1.7e-17 94.4 164 32.9
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 2.2e-17 94.0 134 33.6
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 3.7e-17 93.2 134 33.6
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 3.7e-17 93.2 134 33.6
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 4.9e-17 92.8 151 30.5
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 6.4e-17 92.4 132 34.8
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 6.4e-17 92.4 132 34.1
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 1.1e-16 91.7 132 33.3
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 1.8e-16 90.9 132 32.6
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 1.8e-16 90.9 156 31.4
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 1.8e-16 90.9 144 34.0
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 2.4e-16 90.5 167 32.3
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 2.4e-16 90.5 144 33.3
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.2e-16 90.1 150 32.0
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 4.1e-16 89.7 139 33.8
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 4.1e-16 89.7 139 33.8
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 5.4e-16 89.4 132 33.3
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 5.4e-16 89.4 144 33.3
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 5.4e-16 89.4 144 32.6
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 7.0e-16 89.0 132 34.1
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 7.0e-16 89.0 138 34.8
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 9.2e-16 88.6 138 35.5
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 9.2e-16 88.6 132 32.6
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 1.6e-15 87.8 155 32.3
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 1.6e-15 87.8 138 35.5
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 2.0e-15 87.4 132 32.6
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 2.0e-15 87.4 147 29.9
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 2.0e-15 87.4 146 30.8
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 2.0e-15 87.4 133 34.6
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 3.5e-15 86.7 147 30.6
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 4.6e-15 86.3 152 32.2
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 4.6e-15 86.3 132 33.3
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 5.9e-15 85.9 133 32.3
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 5.9e-15 85.9 132 33.3
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 7.8e-15 85.5 141 33.3
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 7.8e-15 85.5 132 32.6
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 7.8e-15 85.5 155 30.3
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 1.0e-14 85.1 133 33.8
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.3e-14 84.7 132 32.6
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 1.3e-14 84.7 132 32.6
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 1.7e-14 84.3 142 33.1
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.7e-14 84.3 133 31.6
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.7e-14 84.3 133 31.6
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.7e-14 84.3 133 31.6
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.7e-14 84.3 133 31.6
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 1.7e-14 84.3 147 29.9
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 1.7e-14 84.3 132 32.6
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 1.7e-14 84.3 132 33.3
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 1.7e-14 84.3 147 30.6
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 2.3e-14 84.0 132 33.3
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 3.0e-14 83.6 142 33.1
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 3.0e-14 83.6 132 33.3
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 3.0e-14 83.6 132 31.1
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 3.9e-14 83.2 146 29.5
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 3.9e-14 83.2 151 30.5
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 3.9e-14 83.2 138 33.3
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 5.0e-14 82.8 134 32.8
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 5.0e-14 82.8 132 33.3
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 5.0e-14 82.8 132 32.6
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 5.0e-14 82.8 139 30.9
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 5.0e-14 82.8 155 31.0
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 6.6e-14 82.4 134 32.1
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 6.6e-14 82.4 151 29.1
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 1.1e-13 81.6 138 32.6
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 1.9e-13 80.9 147 27.9
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 1.9e-13 80.9 166 27.7
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 1.9e-13 80.9 132 31.8
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 1.9e-13 80.9 167 27.5
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 2.5e-13 80.5 150 29.3
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 3.3e-13 80.1 132 29.5
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 3.3e-13 80.1 132 30.3
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.3e-13 80.1 119 33.6
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 4.3e-13 79.7 132 28.8
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 4.3e-13 79.7 138 31.9
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 4.3e-13 79.7 151 28.5
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 7.3e-13 79.0 132 29.5
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 7.3e-13 79.0 132 30.3
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 7.3e-13 79.0 147 27.9
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 1.2e-12 78.2 132 31.1
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.2e-12 78.2 145 27.6
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.2e-12 78.2 145 27.6
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.1e-12 77.4 171 25.1
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 1.4e-11 74.7 149 28.2
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 1.8e-11 74.3 154 29.2
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 1.8e-11 74.3 153 26.1
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 4.0e-11 73.2 157 28.0
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 1.3e-09 68.2 146 24.0
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 8.3e-09 65.5 143 27.3
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 8.3e-09 65.5 80 36.2
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 1.4e-08 64.7 110 30.0


User provided reference genes

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