Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004865 Prasinoderma coloniale HOM05D004322 ORTHO05D005033 5.0e-101 371.3 215 100.0
MCO15G520 Micromonas commoda HOM05D004322 ORTHO05D005033 7.6e-17 91.7 189 33.9
ATR0584G136 Amborella trichopoda HOM05D004322 ORTHO05D005033 7.1e-15 85.1 191 28.3
HPP92_016157 Vanilla planifolia HOM05D004322 ORTHO05D005033 1.2e-14 84.3 191 29.3
Solyc01g104600.4 Solanum lycopersicum HOM05D004322 ORTHO05D005033 2.1e-14 83.6 191 27.7
Eucgr.I02706 Eucalyptus grandis HOM05D004322 ORTHO05D005033 3.5e-14 82.8 191 28.3
SMO353G0429 Selaginella moellendorffii HOM05D004322 ORTHO05D005033 6.0e-14 82.0 190 26.8
PGSC0003DMG400029776 Solanum tuberosum HOM05D004322 ORTHO05D005033 6.0e-14 82.0 191 27.2
MD08G1227500 Malus domestica HOM05D004322 ORTHO05D005033 7.9e-14 81.6 191 29.3
Mapoly0036s0096 Marchantia polymorpha HOM05D004322 ORTHO05D005033 1.3e-13 80.9 191 28.3
Potri.001G207900 Populus trichocarpa HOM05D004322 ORTHO05D005033 1.3e-13 80.9 191 27.2
BcaC02g09358 Brassica carinata HOM05D004322 ORTHO05D005033 2.3e-13 80.1 191 29.3
C04p41720 Brassica napus HOM05D004322 ORTHO05D005033 2.3e-13 80.1 191 29.3
Manes.10G133500 Manihot esculenta HOM05D004322 ORTHO05D005033 2.3e-13 80.1 191 27.7
THA.LOC104804784 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 2.3e-13 80.1 191 28.8
Migut.N01026 Erythranthe guttata HOM05D004322 ORTHO05D005033 3.9e-13 79.3 191 26.7
Gohir.D03G167900 Gossypium hirsutum HOM05D004322 ORTHO05D005033 3.9e-13 79.3 196 27.0
Gorai.003G177600 Gossypium raimondii HOM05D004322 ORTHO05D005033 3.9e-13 79.3 196 27.0
TWI14G0809 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 3.9e-13 79.3 191 27.7
Gohir.A03G004600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 5.1e-13 79.0 196 27.0
Ah.11g045370 Amaranthus hybridus HOM05D004322 ORTHO05D005033 6.7e-13 78.6 191 25.7
CBR_g26281 Chara braunii HOM05D004322 ORTHO05D005033 6.7e-13 78.6 151 30.5
Thhalv10025920m.g Eutrema salsugineum HOM05D004322 ORTHO05D005033 6.7e-13 78.6 191 28.8
TWI23G0630 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 6.7e-13 78.6 191 27.7
TWI23G1123 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 6.7e-13 78.6 191 27.7
unitig_62.g23621 Utricularia gibba HOM05D004322 ORTHO05D005033 6.7e-13 78.6 186 26.3
AT4G14110 Arabidopsis thaliana HOM05D004322 ORTHO05D005033 8.7e-13 78.2 191 28.8
MD15G1419900 Malus domestica HOM05D004322 ORTHO05D005033 8.7e-13 78.2 191 27.2
MSTRG.16544 Avicennia marina HOM05D004322 ORTHO05D005033 1.9e-12 77.0 191 26.2
Thecc.03G241900 Theobroma cacao HOM05D004322 ORTHO05D005033 1.9e-12 77.0 191 27.7
Pp3c14_8990 Physcomitrium patens HOM05D004322 ORTHO05D005033 2.5e-12 76.6 192 31.2
COL.COLO4_07504 Corchorus olitorius HOM05D004322 ORTHO05D005033 3.3e-12 76.3 191 27.2
Sc10g0004980 Simmondsia chinensis HOM05D004322 ORTHO05D005033 3.3e-12 76.3 151 29.1
Duzib205G0368 Durio zibethinus HOM05D004322 ORTHO05D005033 4.3e-12 75.9 190 27.9
Lj9A313T47 Lonicera japonica HOM05D004322 ORTHO05D005033 5.6e-12 75.5 153 29.4
Actinidia39064 Actinidia chinensis HOM05D004322 ORTHO05D005033 7.4e-12 75.1 191 27.2
CARHR220130 Cardamine hirsuta HOM05D004322 ORTHO05D005033 9.6e-12 74.7 191 27.7
Cfa015337 Carpinus fangiana HOM05D004322 ORTHO05D005033 9.6e-12 74.7 153 28.8
AUR62018226 Chenopodium quinoa HOM05D004322 ORTHO05D005033 9.6e-12 74.7 191 24.6
AL7G42300 Arabidopsis lyrata HOM05D004322 ORTHO05D005033 1.3e-11 74.3 191 27.7
PGR042G3064 Punica granatum HOM05D004322 ORTHO05D005033 1.3e-11 74.3 191 27.7
Atru.chr6.1013_Atru.chr6.1014 Acer truncatum HOM05D004322 ORTHO05D005033 2.1e-11 73.6 191 26.7
TAR376G0532 Trochodendron aralioides HOM05D004322 ORTHO05D005033 2.1e-11 73.6 191 26.7
Glyma.15G048900 Glycine max HOM05D004322 ORTHO05D005033 4.8e-11 72.4 191 25.7
Duzib084G1309 Durio zibethinus HOM05D004322 ORTHO05D005033 6.2e-11 72.0 191 27.2
FAN08G1384 Fragaria x ananassa HOM05D004322 ORTHO05D005033 6.2e-11 72.0 199 26.6
Sed0005743 Sechium edule HOM05D004322 ORTHO05D005033 1.4e-10 70.9 191 26.2
GSVIVG01029694001 Vitis vinifera HOM05D004322 ORTHO05D005033 1.8e-10 70.5 191 24.1
CiPaw.05G042000 Carya illinoinensis HOM05D004322 ORTHO05D005033 2.4e-10 70.1 191 25.7
Nn5g28787 Nelumbo nucifera HOM05D004322 ORTHO05D005033 2.4e-10 70.1 191 24.1
arahy.Tifrunner.gnm1.ann1.H25YH4 Arachis hypogaea HOM05D004322 ORTHO05D005033 3.1e-10 69.7 190 24.7
CANSAT11G1833 Cannabis sativa HOM05D004322 ORTHO05D005033 3.1e-10 69.7 191 25.1
TPR.G19733 Trifolium pratense HOM05D004322 ORTHO05D005033 3.1e-10 69.7 191 25.1
MSTRG.5246 Avicennia marina HOM05D004322 ORTHO05D005033 5.3e-10 68.9 190 24.2
Glyma.08G183900 Glycine max HOM05D004322 ORTHO05D005033 5.3e-10 68.9 191 24.6
Aa31LG9G3260 Aethionema arabicum HOM05D004322 ORTHO05D005033 6.9e-10 68.6 191 26.2
Nitab4.5_0000249g0270 Nicotiana tabacum HOM05D004322 ORTHO05D005033 6.9e-10 68.6 167 25.1
CDE05G0654 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 9.0e-10 68.2 185 25.4
BolC4t25750H Brassica oleracea HOM05D004322 ORTHO05D005033 1.2e-09 67.8 212 26.9
AUR62037741 Chenopodium quinoa HOM05D004322 ORTHO05D005033 1.2e-09 67.8 191 23.6
Cre14.g608850 Chlamydomonas reinhardtii HOM05D004322 ORTHO05D005033 1.2e-09 67.8 179 35.2
Phvul.006G211500 Phaseolus vulgaris HOM05D004322 ORTHO05D005033 2.0e-09 67.0 190 25.3
EL10Ac2g03233 Beta vulgaris HOM05D004322 ORTHO05D005033 2.6e-09 66.6 193 24.9
VMungo0251G0859 Vigna mungo HOM05D004322 ORTHO05D005033 4.5e-09 65.9 190 25.8
Ca_00095_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 9.9e-09 64.7 191 24.1
Ca_29934_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 9.9e-09 64.7 191 24.1
Medtr0153s0030 Medicago truncatula HOM05D004322 ORTHO05D005033 2.2e-08 63.5 153 25.5
Sopen01g047110 Solanum pennellii HOM05D004322 ORTHO05D005033 4.9e-08 62.4 234 22.6
Medtr2g007840 Medicago truncatula HOM05D004322 ORTHO05D005033 6.4e-08 62.0 191 24.1
Hma1.2p1_0557F.1_g178250 Hydrangea macrophylla HOM05D004322 ORTHO05D005033 1.1e-07 61.2 192 24.5
SalBow6G5232 Salvia bowleyana HOM05D004322 ORTHO05D005033 3.2e-07 59.7 227 22.5
Sabra01G0160700 Salix brachista HOM05D004322 ORTHO05D005033 4.2e-07 59.3 153 26.8
SalBow6G0151 Salvia bowleyana HOM05D004322 ORTHO05D005033 4.2e-07 59.3 227 22.5
THA.LOC104809099 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 3.5e-06 56.2 111 27.0


User provided reference genes

Program Settings