Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 2.0e-233 812.4 502 100.0
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 3.8e-27 127.1 284 40.1
MCO13G181 Micromonas commoda HOM05D002428 ORTHO05D008664 7.2e-26 122.9 312 32.1
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 3.5e-12 77.4 137 32.1
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.6e-09 68.6 148 29.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 4.0e-08 63.9 167 28.7
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 4.0e-08 63.9 164 29.9
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 4.0e-08 63.9 159 27.0
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 5.2e-08 63.5 159 28.9
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 8.8e-08 62.8 150 30.0
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 1.2e-07 62.4 159 28.9
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.0e-07 61.6 127 33.9
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.0e-07 61.6 161 27.3
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 2.0e-07 61.6 149 28.9
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 2.0e-07 61.6 161 32.3
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.6e-07 61.2 160 26.2
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 3.4e-07 60.8 160 29.4
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 7.5e-07 59.7 149 33.6
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 7.5e-07 59.7 120 30.8
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 7.5e-07 59.7 165 27.3
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 9.7e-07 59.3 157 30.6
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.3e-06 58.9 157 29.3
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.3e-06 58.9 146 32.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.3e-06 58.9 146 32.2
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.7e-06 58.5 161 32.3
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.2e-06 58.2 144 29.9
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 2.2e-06 58.2 161 28.6
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.2e-06 58.2 162 27.8
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 2.8e-06 57.8 122 31.1
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 3.7e-06 57.4 166 28.3
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 3.7e-06 57.4 132 31.1
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 4.8e-06 57.0 165 27.9
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 4.8e-06 57.0 158 29.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 4.8e-06 57.0 150 26.7
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 6.3e-06 56.6 160 31.2
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 8.3e-06 56.2 164 28.7
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 8.3e-06 56.2 153 28.8
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 8.3e-06 56.2 153 28.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 8.3e-06 56.2 134 32.1
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 8.3e-06 56.2 163 26.4
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 8.3e-06 56.2 154 27.9


User provided reference genes

Program Settings