Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 3.7e-94 348.2 179 100.0
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 4.2e-21 105.5 177 38.4
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 9.4e-21 104.4 176 35.2
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 3.6e-20 102.4 181 38.1
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 1.0e-19 100.9 172 32.0
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 1.8e-19 100.1 164 32.9
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.5e-18 97.1 130 37.7
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 2.6e-18 96.3 134 35.8
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 2.6e-18 96.3 134 35.8
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 2.6e-18 96.3 134 38.1
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 3.4e-18 95.9 165 34.5
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 3.4e-18 95.9 172 34.3
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 7.5e-18 94.7 146 34.9
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 1.3e-17 94.0 134 36.6
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 1.3e-17 94.0 176 33.5
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 1.7e-17 93.6 146 34.9
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 1.7e-17 93.6 150 34.0
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 2.8e-17 92.8 165 30.9
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 2.8e-17 92.8 175 32.0
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 2.8e-17 92.8 175 32.0
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 3.7e-17 92.4 176 33.0
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 3.7e-17 92.4 175 32.0
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 4.8e-17 92.0 165 33.3
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 4.8e-17 92.0 129 37.2
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 4.8e-17 92.0 176 32.4
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 8.3e-17 91.3 129 37.2
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 8.3e-17 91.3 176 31.8
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 8.3e-17 91.3 165 31.5
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.1e-16 90.9 134 34.3
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 1.1e-16 90.9 133 36.8
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 1.4e-16 90.5 165 31.5
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 1.8e-16 90.1 146 34.2
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 1.8e-16 90.1 165 31.5
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 1.8e-16 90.1 178 31.5
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 1.8e-16 90.1 175 31.4
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 2.4e-16 89.7 180 33.9
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 2.4e-16 89.7 165 31.5
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 3.1e-16 89.4 177 32.2
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 4.1e-16 89.0 134 35.8
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 4.1e-16 89.0 134 33.6
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 4.1e-16 89.0 176 30.7
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 4.1e-16 89.0 129 37.2
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 4.1e-16 89.0 178 32.0
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 5.4e-16 88.6 176 31.2
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 5.4e-16 88.6 146 32.2
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 5.4e-16 88.6 176 30.1
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 9.1e-16 87.8 150 32.7
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 9.1e-16 87.8 180 32.2
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 1.6e-15 87.0 176 31.8
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 1.6e-15 87.0 176 31.8
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 1.6e-15 87.0 176 31.8
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 1.6e-15 87.0 176 31.8
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 1.6e-15 87.0 177 31.1
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 2.0e-15 86.7 176 31.2
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 2.0e-15 86.7 176 31.8
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 2.0e-15 86.7 176 29.5
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 2.7e-15 86.3 175 30.3
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 2.7e-15 86.3 176 31.8
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 2.7e-15 86.3 176 30.1
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.7e-15 86.3 176 30.1
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 3.5e-15 85.9 178 29.8
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 3.5e-15 85.9 178 29.8
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 3.5e-15 85.9 177 31.6
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 3.5e-15 85.9 176 31.8
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 4.5e-15 85.5 176 30.7
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 4.5e-15 85.5 176 29.0
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 5.9e-15 85.1 176 30.1
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 7.7e-15 84.7 176 32.4
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 7.7e-15 84.7 176 30.1
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 7.7e-15 84.7 176 31.2
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 7.7e-15 84.7 177 31.1
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.0e-14 84.3 179 33.0
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 1.0e-14 84.3 129 36.4
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 1.0e-14 84.3 134 33.6
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 1.0e-14 84.3 150 32.7
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 1.0e-14 84.3 145 33.8
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 1.3e-14 84.0 176 31.8
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 1.3e-14 84.0 178 29.2
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 1.7e-14 83.6 129 31.8
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 1.7e-14 83.6 176 30.1
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.7e-14 83.6 196 30.1
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 2.2e-14 83.2 129 32.6
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.2e-14 83.2 176 30.1
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.2e-14 83.2 177 29.4
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 2.2e-14 83.2 129 35.7
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 2.2e-14 83.2 176 30.7
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 2.2e-14 83.2 150 32.0
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 2.2e-14 83.2 150 32.0
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 2.9e-14 82.8 178 30.3
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 2.9e-14 82.8 176 31.2
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 2.9e-14 82.8 176 31.2
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 3.8e-14 82.4 134 32.1
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 3.8e-14 82.4 176 30.7
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 3.8e-14 82.4 175 30.3
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 5.0e-14 82.0 134 33.6
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 6.5e-14 81.6 118 34.7
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 1.1e-13 80.9 176 29.5
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 1.1e-13 80.9 176 28.4
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 1.5e-13 80.5 177 30.5
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 1.9e-13 80.1 176 30.7
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 1.9e-13 80.1 147 31.3
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 2.5e-13 79.7 177 30.5
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 2.5e-13 79.7 116 32.8
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 3.2e-13 79.3 176 31.8
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 7.2e-13 78.2 175 29.7
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 7.2e-13 78.2 118 35.6
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 9.4e-13 77.8 176 29.0
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 9.4e-13 77.8 176 28.4
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 9.4e-13 77.8 175 28.6
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 2.1e-12 76.6 116 33.6
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 3.6e-12 75.9 176 27.3
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 4.7e-12 75.5 147 31.3
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 8.0e-12 74.7 176 29.0
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 1.0e-11 74.3 163 30.7
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 4.0e-11 72.4 175 29.1
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 3.4e-10 69.3 94 38.3
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 4.4e-10 68.9 151 28.5
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 1.3e-09 67.4 177 28.2
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 2.2e-09 66.6 94 34.0
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.2e-09 66.6 158 28.5
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 2.2e-09 66.6 92 33.7
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 2.8e-09 66.2 104 30.8
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 3.7e-09 65.9 174 29.3
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 1.8e-08 63.5 94 31.9
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 1.6e-07 60.5 145 27.6
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 1.0e-06 57.8 91 31.9


User provided reference genes

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