Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004745 Prasinoderma coloniale HOM05D003447 ORTHO05D003967 1.6e-303 1045.4 538 100.0
Mapoly0004s0190 Marchantia polymorpha HOM05D003447 ORTHO05D003967 2.2e-39 167.9 560 29.1
Pp3c23_13400 Physcomitrium patens HOM05D003447 ORTHO05D003967 2.9e-39 167.5 527 30.6
CSS0027209 Camellia sinensis var. sinensis HOM05D003447 ORTHO05D003967 9.2e-38 162.5 502 29.1
SGA_v2.0_scaffold60G20972 Striga asiatica HOM05D003447 ORTHO05D003967 4.6e-37 160.2 506 30.0
ECA233G5125 Erigeron canadensis HOM05D003447 ORTHO05D000131 6.0e-37 159.8 500 28.2
SMO367G0726 Selaginella moellendorffii HOM05D003447 ORTHO05D003967 7.8e-37 159.5 504 30.8
Lsat_1_v5_gn_8_12801 Lactuca sativa HOM05D003447 ORTHO05D003967 1.0e-36 159.1 502 28.7
CSS0030356 Camellia sinensis var. sinensis HOM05D003447 ORTHO05D003967 1.3e-36 158.7 503 28.8
Nitab4.5_0000068g0540 Nicotiana tabacum HOM05D003447 ORTHO05D003967 2.3e-36 157.9 504 30.4
Solyc04g079270.4 Solanum lycopersicum HOM05D003447 ORTHO05D003967 5.0e-36 156.8 503 30.0
HanXRQChr15g0468181 Helianthus annuus HOM05D003447 ORTHO05D003967 8.6e-36 156.0 503 28.8
TAR636G2202 Trochodendron aralioides HOM05D003447 ORTHO05D003967 8.6e-36 156.0 499 28.5
Pp3c24_2700 Physcomitrium patens HOM05D003447 ORTHO05D003967 1.5e-35 155.2 562 28.8
GSVIVG01032775001 Vitis vinifera HOM05D003447 ORTHO05D003967 1.5e-35 155.2 507 29.2
Cc02_g06150 Coffea canephora HOM05D003447 ORTHO05D003967 1.9e-35 154.8 502 28.1
Dinv10598 Davidia involucrata HOM05D003447 ORTHO05D003967 1.9e-35 154.8 503 29.4
Hma1.2p1_0523F.1_g172025 Hydrangea macrophylla HOM05D003447 ORTHO05D003967 1.9e-35 154.8 507 28.4
Sopen04g032860 Solanum pennellii HOM05D003447 ORTHO05D003967 1.9e-35 154.8 502 29.7
PGSC0003DMG400008029 Solanum tuberosum HOM05D003447 ORTHO05D003967 1.9e-35 154.8 502 29.9
CAN.G371.42 Capsicum annuum HOM05D003447 ORTHO05D003967 2.5e-35 154.5 504 29.6
Nitab4.5_0002212g0010 Nicotiana tabacum HOM05D003447 ORTHO05D003967 3.3e-35 154.1 502 30.3
Lj8C63G9 Lonicera japonica HOM05D003447 ORTHO05D003967 4.3e-35 153.7 512 28.9
PSO017G1559 Papaver somniferum HOM05D003447 ORTHO05D003967 4.3e-35 153.7 503 28.0
PSO349G0167 Papaver somniferum HOM05D003447 ORTHO05D003967 5.6e-35 153.3 503 28.0
MCO09G860 Micromonas commoda HOM05D003447 ORTHO05D003967 7.3e-35 152.9 508 29.5
MSTRG.8935 Avicennia marina HOM05D003447 ORTHO05D003967 9.5e-35 152.5 497 30.0
DCAR_011834 Daucus carota HOM05D003447 ORTHO05D003967 1.6e-34 151.8 503 28.0
Cpa.g.sc19.146 Carica papaya HOM05D003447 ORTHO05D003967 2.8e-34 151.0 508 28.7
Peaxi162Scf00284g00618 Petunia axillaris HOM05D003447 ORTHO05D003967 2.8e-34 151.0 502 29.3
Hma1.2p1_0292F.1_g115500 Hydrangea macrophylla HOM05D003447 ORTHO05D003967 3.6e-34 150.6 508 28.1
Lsat_1_v5_gn_2_124241 Lactuca sativa HOM05D003447 ORTHO05D003967 3.6e-34 150.6 502 27.9
MSTRG.27311 Avicennia marina HOM05D003447 ORTHO05D003967 8.0e-34 149.4 505 29.1
Oeu011113.1 Olea europaea HOM05D003447 ORTHO05D003967 8.0e-34 149.4 505 28.9
Eucgr.J00180 Eucalyptus grandis HOM05D003447 ORTHO05D003967 1.1e-33 149.1 505 28.7
ATR0174G024 Amborella trichopoda HOM05D003447 ORTHO05D003967 2.3e-33 147.9 526 28.3
ECA238G0968 Erigeron canadensis HOM05D003447 ORTHO05D003967 2.3e-33 147.9 504 31.0
CBR_g20300 Chara braunii HOM05D003447 ORTHO05D003967 3.1e-33 147.5 468 29.3
Prupe.2G254100 Prunus persica HOM05D003447 ORTHO05D003967 3.1e-33 147.5 508 28.5
vmacro06955 Vaccinium macrocarpon HOM05D003447 ORTHO05D003967 3.1e-33 147.5 504 28.8
MELO3C019821.2 Cucumis melo HOM05D003447 ORTHO05D003967 4.0e-33 147.1 514 29.2
Migut.F00656 Erythranthe guttata HOM05D003447 ORTHO05D003967 4.0e-33 147.1 495 29.5
Thecc.10G012500 Theobroma cacao HOM05D003447 ORTHO05D003967 4.0e-33 147.1 501 29.3
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 5.2e-33 146.7 476 29.8
CANSAT56G1623 Cannabis sativa HOM05D003447 ORTHO05D003967 6.8e-33 146.4 507 28.6
Duzib114G0409 Durio zibethinus HOM05D003447 ORTHO05D003967 1.2e-32 145.6 500 29.2
CsaV3_6G036670 Cucumis sativus L. HOM05D003447 ORTHO05D003967 1.5e-32 145.2 514 29.0
Atru.chr12.82 Acer truncatum HOM05D003447 ORTHO05D003967 2.0e-32 144.8 510 27.5
Cfa001291 Carpinus fangiana HOM05D003447 ORTHO05D003967 2.0e-32 144.8 507 29.0
Cre06.g308900 Chlamydomonas reinhardtii HOM05D003447 ORTHO05D003967 2.0e-32 144.8 556 29.1
Oeu059714.1 Olea europaea HOM05D003447 ORTHO05D003967 2.0e-32 144.8 505 28.7
THA.LOC104826843 Tarenaya hassleriana HOM05D003447 ORTHO05D003967 2.0e-32 144.8 536 27.2
unitig_8.g3812 Utricularia gibba HOM05D003447 ORTHO05D003967 3.4e-32 144.1 509 29.9
Thecc.07G077200 Theobroma cacao HOM05D003447 ORTHO05D003967 4.4e-32 143.7 509 28.9
ClCG08G007680 Citrullus lanatus HOM05D003447 ORTHO05D003967 5.8e-32 143.3 514 28.6
Actinidia00965 Actinidia chinensis HOM05D003447 ORTHO05D003967 7.5e-32 142.9 502 27.5
SalBow3G2537 Salvia bowleyana HOM05D003447 ORTHO05D003967 7.5e-32 142.9 503 28.8
AagrBONN_evm.TU.Sc2ySwM_344.5535 Anthoceros agrestis HOM05D003447 ORTHO05D003967 1.3e-31 142.1 527 28.5
Rhsim09G0179400 Rhododendron simsii HOM05D003447 ORTHO05D003967 1.3e-31 142.1 504 28.6
THA.LOC104816537 Tarenaya hassleriana HOM05D003447 ORTHO05D003967 1.7e-31 141.7 536 27.4
Actinidia00666 Actinidia chinensis HOM05D003447 ORTHO05D003967 2.2e-31 141.4 504 27.6
PGR044G2674 Punica granatum HOM05D003447 ORTHO05D003967 2.2e-31 141.4 504 28.2
Oeu051627.1 Olea europaea HOM05D003447 ORTHO05D003967 3.7e-31 140.6 507 28.6
Sed0026105 Sechium edule HOM05D003447 ORTHO05D003967 4.9e-31 140.2 513 27.7
EL10Ac2g04875 Beta vulgaris HOM05D003447 ORTHO05D003967 6.4e-31 139.8 504 27.8
BcaB04g18621 Brassica carinata HOM05D003447 ORTHO05D003967 6.4e-31 139.8 514 27.2
C03p44680 Brassica napus HOM05D003447 ORTHO05D003967 6.4e-31 139.8 514 27.6
BolC3t16730H Brassica oleracea HOM05D003447 ORTHO05D003967 6.4e-31 139.8 514 27.6
AUR62012283 Chenopodium quinoa HOM05D003447 ORTHO05D003967 6.4e-31 139.8 504 27.8
Potri.008G071800 Populus trichocarpa HOM05D003447 ORTHO05D003967 6.4e-31 139.8 504 29.2
Carub.0003s1036 Capsella rubella HOM05D003447 ORTHO05D003967 8.3e-31 139.4 512 27.3
COL.COLO4_25774 Corchorus olitorius HOM05D003447 ORTHO05D003967 8.3e-31 139.4 500 28.6
Gohir.D06G167900 Gossypium hirsutum HOM05D003447 ORTHO05D003967 8.3e-31 139.4 507 27.8
MBI15_g21767_MAGBIO Magnolia biondii HOM05D003447 ORTHO05D003967 8.3e-31 139.4 504 26.8
MD07G1225300 Malus domestica HOM05D003447 ORTHO05D003967 8.3e-31 139.4 507 27.6
Manes.10G009900 Manihot esculenta HOM05D003447 ORTHO05D003967 1.4e-30 138.7 504 28.6
AUR62022923 Chenopodium quinoa HOM05D003447 ORTHO05D003967 1.9e-30 138.3 497 27.6
FAN10G0447 Fragaria x ananassa HOM05D003447 ORTHO05D003967 2.4e-30 137.9 516 27.3
A03p36880 Brassica napus HOM05D003447 ORTHO05D003967 3.2e-30 137.5 514 27.4
Gohir.A06G162400 Gossypium hirsutum HOM05D003447 ORTHO05D003967 3.2e-30 137.5 507 27.6
Gorai.010G195800 Gossypium raimondii HOM05D003447 ORTHO05D003967 3.2e-30 137.5 507 27.6
MD01G1156600 Malus domestica HOM05D003447 ORTHO05D003967 3.2e-30 137.5 507 27.2
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 3.2e-30 137.5 503 28.6
Ciclev10031211m.g Citrus clementina HOM05D003447 ORTHO05D003967 5.4e-30 136.7 507 28.2
Sabra08G0053100 Salix brachista HOM05D003447 ORTHO05D003967 5.4e-30 136.7 504 28.8
Potri.010G185600 Populus trichocarpa HOM05D003447 ORTHO05D003967 7.1e-30 136.3 504 29.0
Carub.0006s0442 Capsella rubella HOM05D003447 ORTHO05D003967 9.2e-30 136.0 508 26.8
arahy.Tifrunner.gnm1.ann1.SQTL6G Arachis hypogaea HOM05D003447 ORTHO05D003967 1.6e-29 135.2 508 27.0
BcaC01g04146 Brassica carinata HOM05D003447 ORTHO05D003967 1.6e-29 135.2 514 27.4
BraA03t12851Z Brassica rapa HOM05D003447 ORTHO05D003967 1.6e-29 135.2 514 27.2
arahy.Tifrunner.gnm1.ann1.G3A1I6 Arachis hypogaea HOM05D003447 ORTHO05D003967 2.1e-29 134.8 508 27.0
FAN03G3165 Fragaria x ananassa HOM05D003447 ORTHO05D003967 2.7e-29 134.4 544 27.0
Aa31LG11G6600 Aethionema arabicum HOM05D003447 ORTHO05D003967 3.5e-29 134.0 506 26.3
Thhalv10020523m.g Eutrema salsugineum HOM05D003447 ORTHO05D003967 3.5e-29 134.0 538 26.6
FvH4_7g24890 Fragaria vesca HOM05D003447 ORTHO05D003967 3.5e-29 134.0 516 26.9
Sed0016246 Sechium edule HOM05D003447 ORTHO05D003967 3.5e-29 134.0 513 27.5
Medtr3g071450 Medicago truncatula HOM05D003447 ORTHO05D003967 4.6e-29 133.7 508 28.1
Aa31LG3G4050 Aethionema arabicum HOM05D003447 ORTHO05D003967 6.0e-29 133.3 512 27.1
AL3G22610 Arabidopsis lyrata HOM05D003447 ORTHO05D003967 6.0e-29 133.3 512 26.2
QL08p063564 Quercus lobata HOM05D003447 ORTHO05D003967 6.0e-29 133.3 502 28.3
Dinv21759 Davidia involucrata HOM05D003447 ORTHO05D003967 7.8e-29 132.9 474 27.6
Psat5g130400 Pisum sativum HOM05D003447 ORTHO05D003967 7.8e-29 132.9 539 27.6
BcaNung07345 Brassica carinata HOM05D003447 ORTHO05D003967 1.0e-28 132.5 514 27.0
BraA05t22612Z Brassica rapa HOM05D003447 ORTHO05D003967 1.0e-28 132.5 515 27.4
Haze_17258 Corylus avellana HOM05D003447 ORTHO05D003967 1.0e-28 132.5 474 28.9
Lj6g0014357 Lotus japonicus HOM05D003447 ORTHO05D003967 1.0e-28 132.5 507 27.2
CiPaw.02G194700 Carya illinoinensis HOM05D003447 ORTHO05D003967 1.3e-28 132.1 507 28.2
Hund15896 Selenicereus undatus HOM05D003447 ORTHO05D003967 1.7e-28 131.7 510 27.6
RcHm_v2.0_Chr1g0370771 Rosa chinensis HOM05D003447 ORTHO05D003967 2.3e-28 131.3 543 27.1
BcaC05g29399 Brassica carinata HOM05D003447 ORTHO05D003967 3.9e-28 130.6 513 27.5
C05p57000 Brassica napus HOM05D003447 ORTHO05D003967 3.9e-28 130.6 513 27.5
BolC5t34363H Brassica oleracea HOM05D003447 ORTHO05D003967 3.9e-28 130.6 513 27.5
Ca_15145_v3 Cicer arietinum L. HOM05D003447 ORTHO05D003967 3.9e-28 130.6 508 27.6
FAN06G2060 Fragaria x ananassa HOM05D003447 ORTHO05D003967 3.9e-28 130.6 516 26.7
Sp3g09400 Schrenkiella parvula HOM05D003447 ORTHO05D003967 3.9e-28 130.6 514 26.7
Sc11g0005230 Simmondsia chinensis HOM05D003447 ORTHO05D003967 3.9e-28 130.6 476 28.2
FAN01G0548 Fragaria x ananassa HOM05D003447 ORTHO05D003967 6.6e-28 129.8 508 27.0
Glyma.18G025400 Glycine max HOM05D003447 ORTHO05D003967 6.6e-28 129.8 511 27.0
VMungo1383G3146 Vigna mungo HOM05D003447 ORTHO05D003967 6.6e-28 129.8 511 27.6
CDE07G0185 Ceratophyllum demersum HOM05D003447 ORTHO05D003967 8.6e-28 129.4 482 26.1
SEGI_19345 Sequoiadendron giganteum HOM05D003447 ORTHO05D003967 8.6e-28 129.4 326 31.6
Sp6g37330 Schrenkiella parvula HOM05D003447 ORTHO05D003967 1.1e-27 129.0 509 26.7
Zm00001eb351830 Zea mays HOM05D003447 ORTHO05D003967 1.5e-27 128.6 520 27.7
AT5G05520 Arabidopsis thaliana HOM05D003447 ORTHO05D003967 1.9e-27 128.3 506 26.1
Sabra10G0142800 Salix brachista HOM05D003447 ORTHO05D003967 1.9e-27 128.3 501 28.1
TAR369G0227 Trochodendron aralioides HOM05D003447 ORTHO05D003967 1.9e-27 128.3 408 29.9
CARHR207750 Cardamine hirsuta HOM05D003447 ORTHO05D003967 2.5e-27 127.9 506 26.3
AT3G11070 Arabidopsis thaliana HOM05D003447 ORTHO05D003967 4.3e-27 127.1 505 25.3
BolC9t59885H Brassica oleracea HOM05D003447 ORTHO05D003967 7.3e-27 126.3 508 26.6
Duzib268G1065 Durio zibethinus HOM05D003447 ORTHO05D003967 7.3e-27 126.3 510 28.6
Glyma.11G231800 Glycine max HOM05D003447 ORTHO05D003967 7.3e-27 126.3 511 26.4
SHI28826 Sapria himalayana HOM05D003447 ORTHO05D003967 7.3e-27 126.3 530 26.8
arahy.Tifrunner.gnm1.ann1.4HSV53 Arachis hypogaea HOM05D003447 ORTHO05D003967 1.2e-26 125.6 502 26.9
AL6G15410 Arabidopsis lyrata HOM05D003447 ORTHO05D003967 1.6e-26 125.2 506 25.9
Os05g0470800 Oryza sativa ssp. japonica HOM05D003447 ORTHO05D003967 1.6e-26 125.2 526 26.8
A10p30750 Brassica napus HOM05D003447 ORTHO05D003967 2.8e-26 124.4 505 26.5
C09p71240 Brassica napus HOM05D003447 ORTHO05D003967 2.8e-26 124.4 508 26.4
BraA10t45116Z Brassica rapa HOM05D003447 ORTHO05D003967 2.8e-26 124.4 505 26.5
CDE04G2434 Ceratophyllum demersum HOM05D003447 ORTHO05D003967 2.8e-26 124.4 431 27.6
Glyma.14G057500 Glycine max HOM05D003447 ORTHO05D003967 3.6e-26 124.0 509 26.1
COL.COLO4_09432 Corchorus olitorius HOM05D003447 ORTHO05D003967 4.7e-26 123.6 493 27.8
Thhalv10013229m.g Eutrema salsugineum HOM05D003447 ORTHO05D003967 4.7e-26 123.6 501 26.7
Glyma.02G264000 Glycine max HOM05D003447 ORTHO05D003967 6.2e-26 123.2 509 26.5
Phvul.001G245000 Phaseolus vulgaris HOM05D003447 ORTHO05D003967 6.2e-26 123.2 511 26.6
Ca_05980_v3 Cicer arietinum L. HOM05D003447 ORTHO05D003967 1.1e-25 122.5 507 26.8
Lalb_Chr11g0075031 Lupinus albus HOM05D003447 ORTHO05D003967 1.1e-25 122.5 507 26.4
Psat2g030840 Pisum sativum HOM05D003447 ORTHO05D003967 1.4e-25 122.1 507 26.4
Zm00001eb368460 Zea mays HOM05D003447 ORTHO05D003967 5.2e-25 120.2 503 27.8
Lalb_Chr23g0277031 Lupinus albus HOM05D003447 ORTHO05D003967 1.2e-24 119.0 508 26.4
CARHR085650 Cardamine hirsuta HOM05D003447 ORTHO05D003967 3.4e-24 117.5 508 26.8
Lalb_Chr08g0231571 Lupinus albus HOM05D003447 ORTHO05D003967 3.4e-24 117.5 507 25.8
BcaC05g29397 Brassica carinata HOM05D003447 ORTHO05D003967 5.8e-24 116.7 497 26.2
SGA_v2.0_scaffold44G16666 Striga asiatica HOM05D003447 ORTHO05D003967 5.8e-24 116.7 529 26.8
VMungo0647G1501 Vigna mungo HOM05D003447 ORTHO05D003967 1.3e-23 115.5 507 25.8
BcaC06g32265 Brassica carinata HOM05D003447 ORTHO05D003967 2.9e-23 114.4 499 25.7
A05p38190 Brassica napus HOM05D003447 ORTHO05D003967 1.1e-22 112.5 484 26.9
Phvul.008G222000 Phaseolus vulgaris HOM05D003447 ORTHO05D003967 1.4e-22 112.1 509 25.1
Lalb_Chr04g0250461 Lupinus albus HOM05D003447 ORTHO05D003967 3.2e-22 110.9 506 25.3
Hund09485 Selenicereus undatus HOM05D003447 ORTHO05D003967 6.0e-21 106.7 513 25.1
Medtr5g083050 Medicago truncatula HOM05D003447 ORTHO05D003967 5.1e-20 103.6 507 25.2
TPR.G18927 Trifolium pratense HOM05D003447 ORTHO05D003967 3.6e-18 97.4 395 26.6
Hund14188 Selenicereus undatus HOM05D003447 ORTHO05D003967 4.4e-16 90.5 288 28.5
Actinidia33913 Actinidia chinensis HOM05D003447 ORTHO05D003967 7.6e-16 89.7 280 26.8
Rhsim03G0145600 Rhododendron simsii HOM05D003447 ORTHO05D003967 2.2e-15 88.2 280 27.5
vmacro10022 Vaccinium macrocarpon HOM05D003447 ORTHO05D003967 6.0e-13 80.1 283 27.6
Actinidia29712 Actinidia chinensis HOM05D003447 ORTHO05D003967 7.8e-13 79.7 169 32.5
BcaC06g32264 Brassica carinata HOM05D003447 ORTHO05D003967 2.1e-10 71.6 287 25.8


User provided reference genes

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