Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004731 Prasinoderma coloniale HOM05D001193 ORTHO05D001016 9.0e-215 750.0 378 100.0
Zm00001eb166570 Zea mays HOM05D001193 ORTHO05D001016 8.1e-14 82.4 307 31.6
Os11g0621000 Oryza sativa ssp. japonica HOM05D001193 ORTHO05D001016 1.2e-12 78.6 307 31.9
Cre06.g299350 Chlamydomonas reinhardtii HOM05D001193 ORTHO05D001016 3.4e-12 77.0 334 26.9
Ca_22487_v3 Cicer arietinum L. HOM05D001193 ORTHO05D001016 7.6e-12 75.9 308 26.6
Dinv22847 Davidia involucrata HOM05D001193 ORTHO05D001016 9.9e-12 75.5 305 27.5
Psat4g110560 Pisum sativum HOM05D001193 ORTHO05D001016 9.9e-12 75.5 307 28.3
AagrBONN_evm.TU.Sc2ySwM_117.4111 Anthoceros agrestis HOM05D001193 ORTHO05D001016 3.8e-11 73.6 250 29.2
Dinv29058 Davidia involucrata HOM05D001193 ORTHO05D001016 3.8e-11 73.6 253 28.5
ECA246G0418 Erigeron canadensis HOM05D001193 ORTHO05D001016 3.8e-11 73.6 270 28.1
Pp3c5_8910 Physcomitrium patens HOM05D001193 ORTHO05D001016 4.9e-11 73.2 250 29.2
HPP92_001481 Vanilla planifolia HOM05D001193 ORTHO05D001016 4.9e-11 73.2 302 27.8
vmacro14226 Vaccinium macrocarpon HOM05D001193 ORTHO05D001016 1.1e-10 72.0 272 26.8
CSS0001070 Camellia sinensis var. sinensis HOM05D001193 ORTHO05D001016 1.4e-10 71.6 250 28.8
SGA_v2.0_scaffold111G31372 Striga asiatica HOM05D001193 ORTHO05D001016 1.4e-10 71.6 273 26.4
COL.COLO4_16872 Corchorus olitorius HOM05D001193 ORTHO05D001016 1.9e-10 71.2 271 28.0
HanXRQChr06g0172841 Helianthus annuus HOM05D001193 ORTHO05D001016 2.4e-10 70.9 269 27.9
Hma1.2p1_1179F.1_g264500 Hydrangea macrophylla HOM05D001193 ORTHO05D001016 2.4e-10 70.9 258 30.2
Psat2g141400 Pisum sativum HOM05D001193 ORTHO05D001016 2.4e-10 70.9 306 25.8
Migut.E01340 Erythranthe guttata HOM05D001193 ORTHO05D001016 3.2e-10 70.5 274 27.0
Gohir.A08G150900 Gossypium hirsutum HOM05D001193 ORTHO05D001016 3.2e-10 70.5 273 27.1
Phvul.003G272800 Phaseolus vulgaris HOM05D001193 ORTHO05D001016 3.2e-10 70.5 274 27.4
Atru.chr6.1502 Acer truncatum HOM05D001193 ORTHO05D001016 4.2e-10 70.1 271 27.3
Cre06.g283900 Chlamydomonas reinhardtii HOM05D001193 ORTHO05D001016 4.2e-10 70.1 263 28.1
Mapoly0090s0038 Marchantia polymorpha HOM05D001193 ORTHO05D001016 4.2e-10 70.1 250 26.4
SEGI_08849 Sequoiadendron giganteum HOM05D001193 ORTHO05D001016 5.4e-10 69.7 253 30.0
Glyma.16G104000 Glycine max HOM05D001193 ORTHO05D001016 7.1e-10 69.3 269 25.7
Gohir.D08G172000 Gossypium hirsutum HOM05D001193 ORTHO05D001016 7.1e-10 69.3 269 27.1
Gorai.004G179300 Gossypium raimondii HOM05D001193 ORTHO05D001016 7.1e-10 69.3 269 27.1
Lj7C161T7 Lonicera japonica HOM05D001193 ORTHO05D001016 7.1e-10 69.3 253 29.6
MD06G1014200 Malus domestica HOM05D001193 ORTHO05D001016 9.3e-10 68.9 302 25.2
Lsat_1_v5_gn_3_20520 Lactuca sativa HOM05D001193 ORTHO05D001016 1.2e-09 68.6 272 28.3
Actinidia18151 Actinidia chinensis HOM05D001193 ORTHO05D001016 1.6e-09 68.2 254 27.2
Cpa.g.sc24.59 Carica papaya HOM05D001193 ORTHO05D001016 1.6e-09 68.2 266 26.7
CDE01G0295 Ceratophyllum demersum HOM05D001193 ORTHO05D001016 1.6e-09 68.2 267 28.8
Eucgr.D02606 Eucalyptus grandis HOM05D001193 ORTHO05D001016 1.6e-09 68.2 251 28.7
HanXRQChr17g0537371 Helianthus annuus HOM05D001193 ORTHO05D001016 1.6e-09 68.2 329 26.7
PGR031G0267 Punica granatum HOM05D001193 ORTHO05D001016 1.6e-09 68.2 251 27.1
MSTRG.1779 Avicennia marina HOM05D001193 ORTHO05D001016 2.1e-09 67.8 272 27.6
Ca_25114_v3 Cicer arietinum L. HOM05D001193 ORTHO05D001016 2.1e-09 67.8 270 25.9
CsaV3_3G001120 Cucumis sativus L. HOM05D001193 ORTHO05D001016 2.1e-09 67.8 256 29.7
Phvul.002G131900 Phaseolus vulgaris HOM05D001193 ORTHO05D001016 2.1e-09 67.8 269 26.8
Actinidia14752 Actinidia chinensis HOM05D001193 ORTHO05D001016 2.7e-09 67.4 311 25.4
Oeu038586.1 Olea europaea HOM05D001193 ORTHO05D001016 2.7e-09 67.4 253 26.9
Hund14338 Selenicereus undatus HOM05D001193 ORTHO05D001016 3.5e-09 67.0 262 27.1
TPR.G31321 Trifolium pratense HOM05D001193 ORTHO05D001016 3.5e-09 67.0 307 26.4
CAN.G1269.8 Capsicum annuum HOM05D001193 ORTHO05D001016 4.6e-09 66.6 250 28.8
Nitab4.5_0009295g0020 Nicotiana tabacum HOM05D001193 ORTHO05D001016 4.6e-09 66.6 301 27.6
BcaC05g27238 Brassica carinata HOM05D001193 ORTHO05D001016 6.0e-09 66.2 256 28.1
MD00G1000700 Malus domestica HOM05D001193 ORTHO05D001016 6.0e-09 66.2 302 25.2
Lalb_Chr16g0380831 Lupinus albus HOM05D001193 ORTHO05D001016 7.8e-09 65.9 269 25.7
Solyc08g075970.3 Solanum lycopersicum HOM05D001193 ORTHO05D001016 7.8e-09 65.9 250 28.8
Sopen08g024620 Solanum pennellii HOM05D001193 ORTHO05D001016 7.8e-09 65.9 307 28.0
unitig_0.g2216 Utricularia gibba HOM05D001193 ORTHO05D001016 7.8e-09 65.9 256 26.6
DCAR_028244 Daucus carota HOM05D001193 ORTHO05D001016 1.0e-08 65.5 270 26.7
Lj2g0013531 Lotus japonicus HOM05D001193 ORTHO05D001016 1.0e-08 65.5 307 26.1
Lj4g0010733 Lotus japonicus HOM05D001193 ORTHO05D001016 1.0e-08 65.5 320 24.4
Medtr8g071150 Medicago truncatula HOM05D001193 ORTHO05D001016 1.0e-08 65.5 308 26.3
Peaxi162Scf00408g00069 Petunia axillaris HOM05D001193 ORTHO05D001016 1.0e-08 65.5 250 29.2
PGSC0003DMG400030882 Solanum tuberosum HOM05D001193 ORTHO05D001016 1.0e-08 65.5 302 27.8
TWI60G1693 Tripterygium wilfordii HOM05D001193 ORTHO05D001016 1.0e-08 65.5 254 26.4
Lalb_Chr05g0215501 Lupinus albus HOM05D001193 ORTHO05D001016 1.3e-08 65.1 269 27.5
Cfa012578 Carpinus fangiana HOM05D001193 ORTHO05D001016 1.7e-08 64.7 252 27.8
Ciclev10002116m.g Citrus clementina HOM05D001193 ORTHO05D001016 1.7e-08 64.7 307 26.7
Duzib068G0065 Durio zibethinus HOM05D001193 ORTHO05D001016 1.7e-08 64.7 251 28.3
ClCG10G001100 Citrullus lanatus HOM05D001193 ORTHO05D001016 2.3e-08 64.3 253 27.7
Glyma.01G148300 Glycine max HOM05D001193 ORTHO05D001016 2.3e-08 64.3 307 25.7
vmacro00071 Vaccinium macrocarpon HOM05D001193 ORTHO05D001016 2.3e-08 64.3 254 28.3
CiPaw.11G102200 Carya illinoinensis HOM05D001193 ORTHO05D001016 3.0e-08 63.9 252 28.6
Oeu061085.1 Olea europaea HOM05D001193 ORTHO05D001016 3.0e-08 63.9 303 26.4
ATR0829G135 Amborella trichopoda HOM05D001193 ORTHO05D001016 3.9e-08 63.5 257 27.6
Carub.0001s3044 Capsella rubella HOM05D001193 ORTHO05D001016 3.9e-08 63.5 256 28.5
Cc08_g04370 Coffea canephora HOM05D001193 ORTHO05D001016 3.9e-08 63.5 259 25.5
Nitab4.5_0001033g0030 Nicotiana tabacum HOM05D001193 ORTHO05D001016 3.9e-08 63.5 304 26.0
Medtr5g027180 Medicago truncatula HOM05D001193 ORTHO05D001016 5.1e-08 63.2 270 25.9
Nn3g21170 Nelumbo nucifera HOM05D001193 ORTHO05D001016 5.1e-08 63.2 306 27.8
ECA246G1774 Erigeron canadensis HOM05D001193 ORTHO05D001016 6.6e-08 62.8 271 26.6
THA.LOC104812763 Tarenaya hassleriana HOM05D001193 ORTHO05D001016 6.6e-08 62.8 256 27.7
Thecc.03G315500 Theobroma cacao HOM05D001193 ORTHO05D001016 6.6e-08 62.8 254 28.0
TAR375G0488 Trochodendron aralioides HOM05D001193 ORTHO05D001016 8.7e-08 62.4 301 24.9
Ah.12g055900 Amaranthus hybridus HOM05D001193 ORTHO05D001016 1.1e-07 62.0 251 27.1
MSTRG.13977 Avicennia marina HOM05D001193 ORTHO05D001016 1.1e-07 62.0 295 25.8
EL10Ac5g11949 Beta vulgaris HOM05D001193 ORTHO05D001016 1.5e-07 61.6 251 26.7
AUR62007396 Chenopodium quinoa HOM05D001193 ORTHO05D001016 1.5e-07 61.6 251 27.1
Zm00001eb276230 Zea mays HOM05D001193 ORTHO05D001016 1.5e-07 61.6 250 27.6
Aqoxy7G00856 Aquilegia oxysepala HOM05D001193 ORTHO05D001016 1.9e-07 61.2 252 28.2
AUR62027334 Chenopodium quinoa HOM05D001193 ORTHO05D001016 1.9e-07 61.2 251 27.1
Haze_08081 Corylus avellana HOM05D001193 ORTHO05D001016 1.9e-07 61.2 270 25.6
MELO3C013802.2 Cucumis melo HOM05D001193 ORTHO05D001016 1.9e-07 61.2 251 28.7
Haze_08084 Corylus avellana HOM05D001193 ORTHO05D001016 2.5e-07 60.8 270 25.6
Sed0001720 Sechium edule HOM05D001193 ORTHO05D001016 4.3e-07 60.1 255 27.8
VMungo1215G0728 Vigna mungo HOM05D001193 ORTHO05D001016 5.6e-07 59.7 326 23.9
Glyma.09G212200 Glycine max HOM05D001193 ORTHO05D001016 7.3e-07 59.3 307 25.1
SalBow4G2675 Salvia bowleyana HOM05D001193 ORTHO05D001016 7.3e-07 59.3 255 25.9
Sc22g0001980 Simmondsia chinensis HOM05D001193 ORTHO05D001016 7.3e-07 59.3 251 27.9
QL12p000927 Quercus lobata HOM05D001193 ORTHO05D001016 9.6e-07 58.9 304 26.0
CSS0042143 Camellia sinensis var. sinensis HOM05D001193 ORTHO05D001016 1.3e-06 58.5 131 35.1
Cc09_g09630 Coffea canephora HOM05D001193 ORTHO05D001016 1.6e-06 58.2 260 25.0
Atru.chr3.2251 Acer truncatum HOM05D001193 ORTHO05D001016 3.6e-06 57.0 250 26.0
BcaB07g32877 Brassica carinata HOM05D001193 ORTHO05D001016 4.8e-06 56.6 256 25.8
Dinv28030 Davidia involucrata HOM05D001193 ORTHO05D001016 4.8e-06 56.6 152 31.6
PSO135G0199 Papaver somniferum HOM05D001193 ORTHO05D001016 8.1e-06 55.8 251 25.5
Sabra01G0102400 Salix brachista HOM05D001193 ORTHO05D001016 8.1e-06 55.8 301 25.9


User provided reference genes

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