Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004717 Prasinoderma coloniale HOM05D000355 ORTHO05D000227 1.2e-130 469.9 261 100.0
HPP92_001103 Vanilla planifolia HOM05D000355 ORTHO05D000227 7.8e-08 62.0 62 46.8
Peaxi162Scf00306g00022 Petunia axillaris HOM05D000355 ORTHO05D000227 1.7e-07 60.8 64 43.8
ClCG03G004700 Citrullus lanatus HOM05D000355 ORTHO05D000227 3.0e-07 60.1 62 46.8
MELO3C002454.2 Cucumis melo HOM05D000355 ORTHO05D000227 3.0e-07 60.1 62 46.8
BcaNung01715 Brassica carinata HOM05D000355 ORTHO05D000227 3.9e-07 59.7 62 46.8
A03p53160 Brassica napus HOM05D000355 ORTHO05D000227 3.9e-07 59.7 62 46.8
C07p51530 Brassica napus HOM05D000355 ORTHO05D000227 3.9e-07 59.7 62 46.8
BolC7t45651H Brassica oleracea HOM05D000355 ORTHO05D000227 3.9e-07 59.7 62 46.8
MD10G1321900 Malus domestica HOM05D000355 ORTHO05D000227 3.9e-07 59.7 68 45.6
Manes.16G006800 Manihot esculenta HOM05D000355 ORTHO05D000227 3.9e-07 59.7 63 44.4
AL7G31730 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 5.1e-07 59.3 59 47.5
BraA03t14384Z Brassica rapa HOM05D000355 ORTHO05D000227 5.1e-07 59.3 62 46.8
Sed0004831 Sechium edule HOM05D000355 ORTHO05D000227 5.1e-07 59.3 62 46.8
Thecc.06G221000 Theobroma cacao HOM05D000355 ORTHO05D000227 5.1e-07 59.3 62 46.8
MSTRG.13139 Avicennia marina HOM05D000355 ORTHO05D000227 6.6e-07 58.9 62 43.5
PGR042G1763 Punica granatum HOM05D000355 ORTHO05D000227 6.6e-07 58.9 78 47.4
CSS0039394 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 8.6e-07 58.5 64 42.2
CARHR228780 Cardamine hirsuta HOM05D000355 ORTHO05D000227 8.6e-07 58.5 59 47.5
CsaV3_1G010730 Cucumis sativus L. HOM05D000355 ORTHO05D000227 8.6e-07 58.5 62 45.2
Thhalv10027246m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 8.6e-07 58.5 59 47.5
Mapoly0006s0294 Marchantia polymorpha HOM05D000355 ORTHO05D000227 8.6e-07 58.5 58 48.3
Atru.chr10.2233 Acer truncatum HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 45.2
ATR0794G099 Amborella trichopoda HOM05D000355 ORTHO05D000227 1.1e-06 58.2 59 45.8
CSS0044358 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 1.1e-06 58.2 65 43.1
DCAR_022567 Daucus carota HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 41.9
Duzib160G0794 Durio zibethinus HOM05D000355 ORTHO05D000227 1.1e-06 58.2 63 44.4
MD05G1347500 Malus domestica HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 45.2
Os05g0518800 Oryza sativa ssp. japonica HOM05D000355 ORTHO05D000227 1.1e-06 58.2 60 50.0
Phvul.006G149660 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 43.5
Potri.011G004100 Populus trichocarpa HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 45.2
Sabra11G0003200 Salix brachista HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 45.2
Sed0024876 Sechium edule HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 45.2
VMungo0540G2432 Vigna mungo HOM05D000355 ORTHO05D000227 1.1e-06 58.2 62 43.5
arahy.Tifrunner.gnm1.ann1.P1HIIT Arachis hypogaea HOM05D000355 ORTHO05D000227 1.5e-06 57.8 62 43.5
ClCG01G021970 Citrullus lanatus HOM05D000355 ORTHO05D000227 1.5e-06 57.8 62 45.2
Oeu010769.1 Olea europaea HOM05D000355 ORTHO05D000227 1.5e-06 57.8 62 48.4
Phvul.005G122700 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 1.5e-06 57.8 66 43.9
Potri.004G014000 Populus trichocarpa HOM05D000355 ORTHO05D000227 1.5e-06 57.8 62 45.2
PGR102G1031 Punica granatum HOM05D000355 ORTHO05D000227 1.5e-06 57.8 61 47.5
Sed0027322 Sechium edule HOM05D000355 ORTHO05D000227 1.5e-06 57.8 62 45.2
AT4G21970 Arabidopsis thaliana HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 47.5
BcaNung05104 Brassica carinata HOM05D000355 ORTHO05D000227 1.9e-06 57.4 62 45.2
Carub.0007s1937 Capsella rubella HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 47.5
CAN.G397.83 Capsicum annuum HOM05D000355 ORTHO05D000227 1.9e-06 57.4 62 46.8
COL.COLO4_31781 Corchorus olitorius HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 47.5
Duzib235G0910 Durio zibethinus HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 47.5
Lj2P268T26 Lonicera japonica HOM05D000355 ORTHO05D000227 1.9e-06 57.4 63 42.9
Lj3g0023877 Lotus japonicus HOM05D000355 ORTHO05D000227 1.9e-06 57.4 62 43.5
Lj4g0018776 Lotus japonicus HOM05D000355 ORTHO05D000227 1.9e-06 57.4 62 43.5
PSO210G2867 Papaver somniferum HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 49.2
PSO832G2499 Papaver somniferum HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 49.2
Sp7g20160 Schrenkiella parvula HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 47.5
THA.LOC104813134 Tarenaya hassleriana HOM05D000355 ORTHO05D000227 1.9e-06 57.4 59 47.5
Zm00001eb147040 Zea mays HOM05D000355 ORTHO05D000227 1.9e-06 57.4 62 48.4
AL6G48100 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
AT4G04630 Arabidopsis thaliana HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
BcaB01g01824 Brassica carinata HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
BcaC04g21317 Brassica carinata HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
A09p26170 Brassica napus HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
C09p33200 Brassica napus HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
BolC9t56154H Brassica oleracea HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
BraA09t38183Z Brassica rapa HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
Carub.0006s3247 Capsella rubella HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
CARHR252900 Cardamine hirsuta HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
CsaV3_6G049040 Cucumis sativus L. HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 45.2
Duzib192G0607 Durio zibethinus HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 43.5
FvH4_3g02030 Fragaria vesca HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 46.8
FAN09G4885 Fragaria x ananassa HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 46.8
Gohir.D09G068900 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.5e-06 57.0 61 47.5
Gohir.D10G012200 Gossypium hirsutum HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 45.2
Gorai.011G013700 Gossypium raimondii HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 45.2
HanXRQChr11g0337281 Helianthus annuus HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 45.8
Lalb_Chr07g0177231 Lupinus albus HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 41.9
Lalb_Chr10g0107031 Lupinus albus HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 46.8
Nn1g03507 Nelumbo nucifera HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 45.8
Nitab4.5_0002827g0050 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.5e-06 57.0 64 42.2
Nitab4.5_0005074g0030 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.5e-06 57.0 64 42.2
Oeu062588.1 Olea europaea HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 44.1
Psat3g031640 Pisum sativum HOM05D000355 ORTHO05D000227 2.5e-06 57.0 61 49.2
Sed0028112 Sechium edule HOM05D000355 ORTHO05D000227 2.5e-06 57.0 62 45.2
TAR624G0087 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.5e-06 57.0 59 47.5
vmacro09705 Vaccinium macrocarpon HOM05D000355 ORTHO05D000227 2.5e-06 57.0 61 44.3
VMungo1383G1562 Vigna mungo HOM05D000355 ORTHO05D000227 2.5e-06 57.0 70 44.3
Atru.chr2.3446 Acer truncatum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 47.5
Aqoxy1G02120 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 3.3e-06 56.6 60 45.0
Ca_09022_v3 Cicer arietinum L. HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 50.8
MELO3C013159.2 Cucumis melo HOM05D000355 ORTHO05D000227 3.3e-06 56.6 62 46.8
Thhalv10029023m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 45.8
Gohir.A05G170500 Gossypium hirsutum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 47.5
Gohir.A09G068600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 47.5
Gohir.D05G173600 Gossypium hirsutum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 47.5
Gorai.009G178800 Gossypium raimondii HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 47.5
Lj6g0019306 Lotus japonicus HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 45.8
MD03G1199600 Malus domestica HOM05D000355 ORTHO05D000227 3.3e-06 56.6 62 45.2
PSO339G5944 Papaver somniferum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 49.2
PSO801G0353 Papaver somniferum HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 49.2
Peaxi162Scf00834g00013 Petunia axillaris HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 45.8
Peaxi162Scf01204g00001 Petunia axillaris HOM05D000355 ORTHO05D000227 3.3e-06 56.6 64 42.2
TPR.G9943 Trifolium pratense HOM05D000355 ORTHO05D000227 3.3e-06 56.6 59 44.1
TWI74G0135 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 3.3e-06 56.6 62 45.2
TAR627G0409 Trochodendron aralioides HOM05D000355 ORTHO05D000227 3.3e-06 56.6 62 43.5
Aqoxy1G01887 Aquilegia oxysepala HOM05D000355 ORTHO05D000227 4.3e-06 56.2 62 45.2
MSTRG.26626 Avicennia marina HOM05D000355 ORTHO05D000227 4.3e-06 56.2 62 50.0
BcaC01g03900 Brassica carinata HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 47.5
Cfa000216 Carpinus fangiana HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 45.8
CiPaw.09G092300 Carya illinoinensis HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 45.8
Glyma.13G204600 Glycine max HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 44.1
Hma1.2p1_0091F.1_g046420 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 4.3e-06 56.2 61 45.9
Medtr2g023390 Medicago truncatula HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 44.1
Nitab4.5_0001875g0060 Nicotiana tabacum HOM05D000355 ORTHO05D000227 4.3e-06 56.2 62 46.8
Os04g0413900 Oryza sativa ssp. japonica HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 50.8
Psat0s402g0040 Pisum sativum HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 44.1
QL05p073075 Quercus lobata HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 45.8
RcHm_v2.0_Chr5g0002931 Rosa chinensis HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 45.8
Solyc02g080580.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 4.3e-06 56.2 64 40.6
Solyc10g086110.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 4.3e-06 56.2 62 41.9
Sopen02g025280 Solanum pennellii HOM05D000355 ORTHO05D000227 4.3e-06 56.2 64 40.6
Sopen10g035480 Solanum pennellii HOM05D000355 ORTHO05D000227 4.3e-06 56.2 62 41.9
PGSC0003DMG400016480 Solanum tuberosum HOM05D000355 ORTHO05D000227 4.3e-06 56.2 64 40.6
TAR633G1747 Trochodendron aralioides HOM05D000355 ORTHO05D000227 4.3e-06 56.2 62 46.8
Zm00001eb083770 Zea mays HOM05D000355 ORTHO05D000227 4.3e-06 56.2 59 50.8
BcaB06g29531 Brassica carinata HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 45.9
C05p52160 Brassica napus HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 45.9
BolC5t33900H Brassica oleracea HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 45.9
MELO3C007391.2 Cucumis melo HOM05D000355 ORTHO05D000227 5.6e-06 55.8 62 43.5
CsaV3_7G021860 Cucumis sativus L. HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 47.5
Duzib168G0847 Durio zibethinus HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 47.5
Glyma.19G195700 Glycine max HOM05D000355 ORTHO05D000227 5.6e-06 55.8 59 49.2
Gorai.006G083100 Gossypium raimondii HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 45.9
Medtr7g105130 Medicago truncatula HOM05D000355 ORTHO05D000227 5.6e-06 55.8 59 49.2
Phvul.001G191900 Phaseolus vulgaris HOM05D000355 ORTHO05D000227 5.6e-06 55.8 59 49.2
Pp3c24_6800 Physcomitrium patens HOM05D000355 ORTHO05D000227 5.6e-06 55.8 35 68.6
Prupe.7G102100 Prunus persica HOM05D000355 ORTHO05D000227 5.6e-06 55.8 61 47.5
RcHm_v2.0_Chr5g0040191 Rosa chinensis HOM05D000355 ORTHO05D000227 5.6e-06 55.8 62 45.2
Sp6g04250 Schrenkiella parvula HOM05D000355 ORTHO05D000227 5.6e-06 55.8 59 45.8
Solyc09g010140.3 Solanum lycopersicum HOM05D000355 ORTHO05D000227 5.6e-06 55.8 62 46.8
Sopen09g004880 Solanum pennellii HOM05D000355 ORTHO05D000227 5.6e-06 55.8 62 46.8
PGSC0003DMG400008941 Solanum tuberosum HOM05D000355 ORTHO05D000227 5.6e-06 55.8 62 46.8
THA.LOC104812972 Tarenaya hassleriana HOM05D000355 ORTHO05D000227 5.6e-06 55.8 62 45.2
TPR.G23308 Trifolium pratense HOM05D000355 ORTHO05D000227 5.6e-06 55.8 59 49.2
Zm00001eb406900 Zea mays HOM05D000355 ORTHO05D000227 5.6e-06 55.8 63 44.4
AagrBONN_evm.TU.Sc2ySwM_228.5491 Anthoceros agrestis HOM05D000355 ORTHO05D000227 7.3e-06 55.5 57 47.4
MSTRG.15144 Avicennia marina HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 47.5
BcaC01g03905 Brassica carinata HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 47.5
C03p47390 Brassica napus HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 47.5
BolC3t17009H Brassica oleracea HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 47.5
AUR62020432 Chenopodium quinoa HOM05D000355 ORTHO05D000227 7.3e-06 55.5 62 43.5
Eucgr.B03837 Eucalyptus grandis HOM05D000355 ORTHO05D000227 7.3e-06 55.5 63 44.4
FvH4_6g19420 Fragaria vesca HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 49.2
FAN25G1886 Fragaria x ananassa HOM05D000355 ORTHO05D000227 7.3e-06 55.5 61 47.5
Peaxi162Scf00653g00015 Petunia axillaris HOM05D000355 ORTHO05D000227 7.3e-06 55.5 61 41.0
QL07p038276 Quercus lobata HOM05D000355 ORTHO05D000227 7.3e-06 55.5 62 45.2
Rhsim06G0218100 Rhododendron simsii HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 45.8
GSVIVG01004631001 Vitis vinifera HOM05D000355 ORTHO05D000227 7.3e-06 55.5 59 47.5
BcaC09g51175 Brassica carinata HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 45.8
A01p13350 Brassica napus HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 45.8
C01p16060 Brassica napus HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 45.8
BolC1t01567H Brassica oleracea HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 45.8
BraA01t01275Z Brassica rapa HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 45.8
Cfa016641 Carpinus fangiana HOM05D000355 ORTHO05D000227 9.6e-06 55.1 62 45.2
FAN02G1600 Fragaria x ananassa HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 49.2
Glyma.07G260700 Glycine max HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 42.4
Glyma.17G013300 Glycine max HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 42.4
Lalb_Chr18g0056391 Lupinus albus HOM05D000355 ORTHO05D000227 9.6e-06 55.1 62 40.3
PSO384G1848 Papaver somniferum HOM05D000355 ORTHO05D000227 9.6e-06 55.1 61 47.5
Peaxi162Scf00308g00051 Petunia axillaris HOM05D000355 ORTHO05D000227 9.6e-06 55.1 62 40.3
Pp3c8_15060 Physcomitrium patens HOM05D000355 ORTHO05D000227 9.6e-06 55.1 32 75.0
Prupe.4G214900 Prunus persica HOM05D000355 ORTHO05D000227 9.6e-06 55.1 62 45.2
Solyc07g064650.3 Solanum lycopersicum HOM05D000355 ORTHO05D000227 9.6e-06 55.1 61 42.6
Sopen07g032850 Solanum pennellii HOM05D000355 ORTHO05D000227 9.6e-06 55.1 61 42.6
PGSC0003DMG400022315 Solanum tuberosum HOM05D000355 ORTHO05D000227 9.6e-06 55.1 61 42.6
TWI38G1542 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 44.1
TWI63G0422 Tripterygium wilfordii HOM05D000355 ORTHO05D000227 9.6e-06 55.1 59 44.1


User provided reference genes

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