Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004619 Prasinoderma coloniale HOM05D003580 ORTHO05D004441 0.0e+00 1753.0 1047 100.0
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 9.3e-52 209.9 1053 25.1
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 5.8e-46 190.7 997 24.8
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 5.5e-44 184.1 996 23.9
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.1e-43 182.2 1055 24.7
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 2.1e-43 182.2 1032 25.7
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 6.1e-43 180.6 990 23.1
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 7.9e-43 180.3 1004 23.2
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 1.0e-42 179.9 1007 23.5
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 1.3e-42 179.5 1015 23.5
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 2.3e-42 178.7 1013 23.4
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 5.1e-42 177.6 1004 23.0
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 6.7e-42 177.2 1012 22.8
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.1e-41 176.4 1010 24.9
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 1.5e-41 176.0 990 24.8
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 1.9e-41 175.6 1017 23.1
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 7.4e-41 173.7 1022 23.8
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 9.7e-41 173.3 1023 25.4
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 1.3e-40 172.9 992 23.3
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 1.3e-40 172.9 993 24.6
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.6e-40 172.6 997 23.5
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.6e-40 172.6 1024 24.9
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 2.2e-40 172.2 1006 23.3
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 2.2e-40 172.2 990 23.9
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.2e-40 172.2 1032 24.1
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 4.8e-40 171.0 1006 23.3
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.2e-40 170.2 1000 25.1
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 1.1e-39 169.9 1001 23.6
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 1.8e-39 169.1 1001 23.4
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.8e-39 169.1 1019 23.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 9.0e-39 166.8 962 23.2
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 1.2e-38 166.4 1004 23.3
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.5e-38 166.0 1009 23.5
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.6e-38 165.2 962 23.0
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 2.6e-38 165.2 1013 22.9
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 3.4e-38 164.9 1017 23.0
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 7.7e-38 163.7 1019 22.7
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 1.0e-37 163.3 1001 22.8
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.3e-37 162.9 962 22.8
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.3e-37 162.9 1012 23.7
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 1.3e-37 162.9 1001 22.7
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 1.7e-37 162.5 1017 24.2
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 3.8e-37 161.4 1004 23.2
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 5.0e-37 161.0 1003 22.6
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 6.5e-37 160.6 1004 23.4
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 8.5e-37 160.2 1005 22.6
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 8.5e-37 160.2 966 26.6
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 1.1e-36 159.8 1014 23.1
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.4e-36 159.5 962 22.7
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 3.2e-36 158.3 1003 22.6
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 3.2e-36 158.3 1006 23.6
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 4.2e-36 157.9 1006 22.8
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 5.5e-36 157.5 1003 22.5
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 5.5e-36 157.5 968 22.7
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 5.5e-36 157.5 962 22.6
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 5.5e-36 157.5 997 22.9
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 5.5e-36 157.5 1016 22.8
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 9.4e-36 156.8 993 22.4
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.2e-35 156.4 1003 23.1
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 2.1e-35 155.6 1009 23.2
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.1e-35 155.6 995 22.5
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.7e-35 155.2 1013 23.0
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 2.7e-35 155.2 971 24.2
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 3.6e-35 154.8 967 24.3
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 6.1e-35 154.1 975 23.3
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 7.9e-35 153.7 1022 23.9
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 7.9e-35 153.7 960 24.7
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 1.0e-34 153.3 942 23.7
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.4e-34 152.9 1001 23.2
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 1.4e-34 152.9 1005 23.5
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.8e-34 152.5 1038 23.1
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 3.9e-34 151.4 820 22.7
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 3.9e-34 151.4 934 23.6
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 5.1e-34 151.0 1016 23.0
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 8.8e-34 150.2 1012 22.3
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 8.8e-34 150.2 1007 23.2
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 1.1e-33 149.8 965 22.6
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 1.5e-33 149.4 1018 22.9
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 1.5e-33 149.4 1015 23.1
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 2.0e-33 149.1 995 22.6
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 2.5e-33 148.7 1016 23.5
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 3.3e-33 148.3 1011 22.7
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 3.3e-33 148.3 1017 22.2
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 4.3e-33 147.9 1012 24.0
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 5.7e-33 147.5 979 23.1
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 5.7e-33 147.5 1011 22.5
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 5.7e-33 147.5 989 23.0
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 1.3e-32 146.4 996 23.2
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 1.7e-32 146.0 1001 22.8
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 2.2e-32 145.6 1019 22.8
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 3.7e-32 144.8 1012 22.4
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 4.8e-32 144.4 1001 22.6
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 8.2e-32 143.7 1000 22.4
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.8e-31 142.5 1000 22.7
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.8e-31 142.5 1002 21.8
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 5.3e-31 141.0 1011 22.7
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 6.9e-31 140.6 994 23.2
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 9.1e-31 140.2 1012 21.9
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 1.5e-30 139.4 1038 24.0
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 1.0e-29 136.7 1000 21.9
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 1.7e-29 136.0 1004 21.7
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 2.2e-29 135.6 1020 22.5
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 6.5e-29 134.0 967 23.2
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.4e-28 132.9 994 23.9
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 1.4e-28 132.9 997 24.7
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 2.5e-28 132.1 997 21.5
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 2.5e-28 132.1 1000 22.8
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 3.2e-28 131.7 997 21.5
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 5.5e-28 131.0 901 22.0
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 3.6e-27 128.3 1030 22.5
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 3.6e-27 128.3 898 23.4
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 3.6e-27 128.3 983 22.1
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 4.7e-27 127.9 1008 22.2
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 4.7e-27 127.9 1050 23.0
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 1.4e-26 126.3 261 31.8
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 2.3e-26 125.6 258 31.8
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-25 123.2 484 26.4
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 5.7e-25 120.9 653 23.9
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 3.7e-24 118.2 670 23.6
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 1.1e-23 116.7 234 34.2
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 1.1e-23 116.7 234 34.2
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-23 116.7 649 25.4
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 3.5e-22 111.7 227 33.0
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 3.5e-22 111.7 941 21.3
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 4.5e-22 111.3 221 30.3
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 1.7e-21 109.4 939 22.2
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 3.8e-21 108.2 260 29.6
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 6.5e-21 107.5 666 22.8
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 1.6e-19 102.8 250 31.2
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 3.0e-18 98.6 881 21.5
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 5.2e-18 97.8 172 33.1
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 1.1e-15 90.1 966 21.7
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.6e-11 75.1 303 26.4
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 1.8e-10 72.8 253 28.1
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 3.0e-10 72.0 422 24.6
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 3.0e-10 72.0 422 24.6
FvH4_3g34230 Fragaria vesca HOM05D003580 ORTHO05D004441 6.8e-10 70.9 115 36.5
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 6.8e-10 70.9 407 24.8
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.0e-09 69.3 122 32.8


User provided reference genes

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