Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 2.0e-59 232.3 120 100.0
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 2.2e-26 122.5 98 62.2
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 1.2e-22 110.2 114 50.0
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 1.2e-22 110.2 88 61.4
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 3.3e-22 108.6 107 52.3
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 5.7e-22 107.8 107 51.4
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 7.5e-22 107.5 101 52.5
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 1.3e-21 106.7 110 51.8
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.7e-21 106.3 99 54.5
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.7e-21 106.3 99 54.5
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.7e-21 106.3 83 61.4
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 1.7e-21 106.3 85 60.0
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 1.7e-21 106.3 99 54.5
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 2.2e-21 105.9 83 59.0
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 2.2e-21 105.9 90 57.8
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 3.7e-21 105.1 82 59.8
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 3.7e-21 105.1 77 64.9
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 3.7e-21 105.1 88 59.1
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 3.7e-21 105.1 101 53.5
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 6.3e-21 104.4 82 59.8
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 6.3e-21 104.4 82 59.8
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 8.3e-21 104.0 82 59.8
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 8.3e-21 104.0 82 58.5
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 8.3e-21 104.0 85 57.6
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 8.3e-21 104.0 79 63.3
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 8.3e-21 104.0 99 53.5
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.1e-20 103.6 101 51.5
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.1e-20 103.6 82 61.0
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.1e-20 103.6 82 61.0
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.4e-20 103.2 82 58.5
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 1.4e-20 103.2 97 56.7
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 1.4e-20 103.2 77 63.6
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 1.4e-20 103.2 100 52.0
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 1.8e-20 102.8 103 50.5
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 1.8e-20 102.8 85 57.6
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 1.8e-20 102.8 92 56.5
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.8e-20 102.8 88 56.8
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 2.4e-20 102.4 102 51.0
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 2.4e-20 102.4 82 59.8
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 2.4e-20 102.4 77 62.3
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.4e-20 102.4 100 52.0
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 2.4e-20 102.4 77 63.6
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 3.1e-20 102.1 73 64.4
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 4.1e-20 101.7 113 51.3
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 4.1e-20 101.7 81 60.5
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 4.1e-20 101.7 118 45.8
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 4.1e-20 101.7 82 58.5
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 5.3e-20 101.3 81 60.5
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 7.0e-20 100.9 84 59.5
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 7.0e-20 100.9 86 57.0
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 7.0e-20 100.9 100 51.0
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 7.0e-20 100.9 76 60.5
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 9.1e-20 100.5 81 58.0
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 1.2e-19 100.1 82 57.3
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.2e-19 100.1 82 57.3
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 1.2e-19 100.1 98 51.0
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 1.6e-19 99.8 76 61.8
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 1.6e-19 99.8 108 50.9
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 2.0e-19 99.4 95 51.6
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 2.0e-19 99.4 76 60.5
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 2.7e-19 99.0 112 50.0
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 2.7e-19 99.0 116 44.8
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 3.5e-19 98.6 82 56.1
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 4.5e-19 98.2 81 56.8
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 5.9e-19 97.8 81 55.6
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 5.9e-19 97.8 82 56.1
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 5.9e-19 97.8 82 56.1
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 5.9e-19 97.8 82 58.5
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 7.7e-19 97.4 104 50.0
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 7.7e-19 97.4 93 52.7
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 1.0e-18 97.1 81 55.6
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.0e-18 97.1 107 50.5
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 1.3e-18 96.7 113 46.9
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 1.3e-18 96.7 82 57.3
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.3e-18 96.7 82 58.5
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.3e-18 96.7 111 50.5
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 1.3e-18 96.7 73 63.0
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.7e-18 96.3 67 65.7
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.7e-18 96.3 82 56.1
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 1.7e-18 96.3 82 56.1
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 1.7e-18 96.3 82 57.3
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 2.2e-18 95.9 110 46.4
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 2.9e-18 95.5 76 57.9
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 6.5e-18 94.4 88 52.3
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 8.5e-18 94.0 81 55.6
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 8.5e-18 94.0 81 54.3
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 1.1e-17 93.6 96 49.0
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.1e-17 93.6 96 49.0
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 1.1e-17 93.6 96 49.0
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 1.1e-17 93.6 96 49.0
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.1e-17 93.6 96 49.0
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 1.5e-17 93.2 100 48.0
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 1.5e-17 93.2 92 50.0
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 1.9e-17 92.8 92 50.0
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.9e-17 92.8 81 54.3
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 1.9e-17 92.8 76 56.6
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 1.9e-17 92.8 81 54.3
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 2.5e-17 92.4 81 54.3
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 2.5e-17 92.4 81 54.3
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 2.5e-17 92.4 82 56.1
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 4.2e-17 91.7 81 54.3
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 4.2e-17 91.7 100 47.0
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 9.4e-17 90.5 83 51.8
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 1.6e-16 89.7 81 53.1
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 2.7e-16 89.0 78 53.8
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.4e-15 86.7 79 50.6
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 4.0e-15 85.1 80 56.2
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 1.3e-13 80.1 128 40.6
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 6.3e-13 77.8 73 45.2
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 5.9e-11 71.2 47 68.1
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 1.0e-10 70.5 47 70.2
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 5.0e-10 68.2 46 65.2
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 5.0e-10 68.2 46 65.2
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 8.6e-10 67.4 82 45.1
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 2.1e-08 62.8 107 41.1
Aqoxy3G04292 Aquilegia oxysepala HOM05D002854 ORTHO05D003051 6.8e-07 57.8 96 35.4
MELO3C002161.2 Cucumis melo HOM05D002854 ORTHO05D003051 1.5e-06 56.6 86 36.0
MBI06_g27499_MAGBIO Magnolia biondii HOM05D002854 ORTHO05D003051 2.6e-06 55.8 86 38.4
Nitab4.5_0000921g0080 Nicotiana tabacum HOM05D002854 ORTHO05D003051 2.6e-06 55.8 87 35.6
ATR0618G277 Amborella trichopoda HOM05D002854 ORTHO05D003051 4.4e-06 55.1 87 37.9
Migut.D02063 Erythranthe guttata HOM05D002854 ORTHO05D003051 4.4e-06 55.1 89 36.0
ECA236G1414 Erigeron canadensis HOM05D002854 ORTHO05D003051 5.7e-06 54.7 86 38.4
RcHm_v2.0_Chr7g0177271 Rosa chinensis HOM05D002854 ORTHO05D003051 5.7e-06 54.7 87 36.8
ClCG01G014880 Citrullus lanatus HOM05D002854 ORTHO05D003051 7.5e-06 54.3 86 34.9
CsaV3_1G007440 Cucumis sativus L. HOM05D002854 ORTHO05D003051 7.5e-06 54.3 86 34.9
Lsat_1_v5_gn_7_11001 Lactuca sativa HOM05D002854 ORTHO05D003051 7.5e-06 54.3 86 37.2
Zm00001eb248250 Zea mays HOM05D002854 ORTHO05D003051 7.5e-06 54.3 88 39.8
Potri.012G036800 Populus trichocarpa HOM05D002854 ORTHO05D003051 9.8e-06 53.9 87 35.6
Sabra12G0025300 Salix brachista HOM05D002854 ORTHO05D003051 9.8e-06 53.9 87 35.6


User provided reference genes

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