Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 9.5e-59 230.3 150 100.0
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.5e-16 90.1 113 67.3
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 4.5e-16 88.6 136 62.5
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 1.7e-15 86.7 124 65.3
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 1.7e-15 86.7 114 69.3
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.2e-15 86.3 114 69.3
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 5.0e-15 85.1 131 63.4
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.1e-14 84.0 120 65.0
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.4e-14 83.6 134 61.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.5e-14 82.8 119 63.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 3.2e-14 82.4 114 66.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 3.2e-14 82.4 114 67.5
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 3.2e-14 82.4 114 67.5
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 3.2e-14 82.4 131 63.4
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 3.2e-14 82.4 132 61.4
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 5.5e-14 81.6 114 66.7
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 5.5e-14 81.6 125 61.6
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 9.3e-14 80.9 114 66.7
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 9.3e-14 80.9 137 60.6
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 9.3e-14 80.9 114 66.7
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 1.2e-13 80.5 121 64.5
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.2e-13 80.5 109 67.9
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.2e-13 80.5 114 65.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.6e-13 80.1 139 38.8
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 1.6e-13 80.1 137 59.9
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.6e-13 80.1 123 63.4
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.6e-13 80.1 114 66.7
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 1.6e-13 80.1 114 66.7
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.6e-13 80.1 109 66.1
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 2.1e-13 79.7 114 49.1
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.1e-13 79.7 114 66.7
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.1e-13 79.7 114 66.7
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 2.1e-13 79.7 120 63.3
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.1e-13 79.7 114 66.7
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 2.1e-13 79.7 124 63.7
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.1e-13 79.7 119 63.9
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 2.7e-13 79.3 140 57.1
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.6e-13 79.0 119 64.7
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.6e-13 79.0 114 65.8
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 4.6e-13 78.6 109 67.9
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 4.6e-13 78.6 109 67.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 4.6e-13 78.6 109 67.0
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 4.6e-13 78.6 114 65.8
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 6.1e-13 78.2 114 65.8
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 6.1e-13 78.2 114 65.8
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 6.1e-13 78.2 109 67.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 6.1e-13 78.2 124 62.1
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 6.1e-13 78.2 119 63.0
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 6.1e-13 78.2 108 65.7
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 7.9e-13 77.8 122 61.5
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 7.9e-13 77.8 137 57.7
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 7.9e-13 77.8 116 64.7
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 7.9e-13 77.8 127 61.4
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 7.9e-13 77.8 114 65.8
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.0e-12 77.4 114 64.0
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.4e-12 77.0 134 61.2
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.4e-12 77.0 136 58.8
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.8e-12 76.6 142 59.9
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.3e-12 76.3 140 57.9
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 2.3e-12 76.3 114 65.8
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 3.0e-12 75.9 124 62.1
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 3.0e-12 75.9 140 57.9
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 3.9e-12 75.5 114 65.8
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 3.9e-12 75.5 137 58.4
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 5.1e-12 75.1 113 63.7
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 6.7e-12 74.7 122 62.3
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 6.7e-12 74.7 143 55.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 8.8e-12 74.3 114 64.0
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 8.8e-12 74.3 137 57.7
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 8.8e-12 74.3 122 62.3
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 8.8e-12 74.3 137 57.7
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 8.8e-12 74.3 114 64.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.1e-11 73.9 116 63.8
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.5e-11 73.6 130 60.0
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.5e-11 73.6 142 57.7
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.5e-11 73.6 137 58.4
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.5e-11 73.6 114 64.9
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 2.5e-11 72.8 114 63.2
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 3.3e-11 72.4 123 58.5
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 3.3e-11 72.4 51 66.7
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 4.3e-11 72.0 48 66.7
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 4.3e-11 72.0 114 63.2
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 7.4e-11 71.2 137 56.2
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 7.4e-11 71.2 48 66.7
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 7.4e-11 71.2 46 69.6
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 9.7e-11 70.9 72 54.2
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 9.7e-11 70.9 114 63.2
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.8e-10 69.3 48 66.7
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 3.7e-10 68.9 109 63.3
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.7e-10 68.9 77 51.9
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 3.7e-10 68.9 54 59.3
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.1e-09 67.4 124 59.7
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.4e-09 67.0 119 48.7
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 5.3e-09 65.1 67 50.7
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 6.9e-09 64.7 92 59.8
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 5.9e-08 61.6 74 45.9
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 7.7e-08 61.2 124 57.3
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.7e-07 60.1 65 50.8
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.7e-07 60.1 111 32.4
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 9.4e-06 54.3 114 56.1


User provided reference genes

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