Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 7.8e-145 517.3 298 100.0
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 3.3e-34 149.8 289 35.3
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 5.6e-34 149.1 281 34.5
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 9.5e-34 148.3 285 34.4
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 9.5e-34 148.3 191 45.0
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 9.5e-34 148.3 194 44.3
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 2.1e-33 147.1 281 35.9
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 2.8e-33 146.7 285 38.2
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 2.8e-33 146.7 186 43.0
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 4.7e-33 146.0 282 33.7
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 4.7e-33 146.0 291 34.4
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 6.1e-33 145.6 280 35.7
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 8.0e-33 145.2 188 42.6
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 8.0e-33 145.2 188 42.6
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.0e-32 144.8 194 43.3
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 1.4e-32 144.4 189 43.4
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 1.4e-32 144.4 285 36.8
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.8e-32 144.1 191 43.5
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 1.8e-32 144.1 188 42.6
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 2.3e-32 143.7 188 43.6
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 4.0e-32 142.9 298 33.9
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 4.0e-32 142.9 295 34.9
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 4.0e-32 142.9 188 42.0
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 5.2e-32 142.5 288 34.4
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 5.2e-32 142.5 288 34.4
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 5.2e-32 142.5 188 42.6
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 6.8e-32 142.1 296 33.8
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 6.8e-32 142.1 190 42.6
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 6.8e-32 142.1 287 34.5
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 8.9e-32 141.7 194 40.7
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 8.9e-32 141.7 187 43.3
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 8.9e-32 141.7 188 42.6
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 8.9e-32 141.7 188 42.0
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 8.9e-32 141.7 278 41.7
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.2e-31 141.4 191 40.8
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 1.5e-31 141.0 192 42.2
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 1.5e-31 141.0 283 36.7
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 1.5e-31 141.0 287 34.8
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 1.5e-31 141.0 188 42.6
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 1.5e-31 141.0 282 35.5
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.5e-31 141.0 281 33.1
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.0e-31 140.6 277 34.7
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 2.0e-31 140.6 282 35.5
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 2.0e-31 140.6 188 42.0
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 2.6e-31 140.2 293 34.1
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 3.4e-31 139.8 188 41.0
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 3.4e-31 139.8 285 34.0
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 3.4e-31 139.8 285 34.0
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 3.4e-31 139.8 285 34.0
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 3.4e-31 139.8 188 41.5
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 3.4e-31 139.8 290 35.2
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 4.4e-31 139.4 188 41.0
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 4.4e-31 139.4 287 33.1
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 5.7e-31 139.0 279 34.4
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 5.7e-31 139.0 292 34.9
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 7.5e-31 138.7 298 33.2
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 7.5e-31 138.7 290 34.1
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 7.5e-31 138.7 282 35.8
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 9.8e-31 138.3 293 35.5
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 9.8e-31 138.3 293 35.2
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 9.8e-31 138.3 189 40.2
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 1.3e-30 137.9 192 41.7
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 1.3e-30 137.9 285 34.4
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.3e-30 137.9 279 34.4
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 1.3e-30 137.9 295 34.9
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 1.7e-30 137.5 281 36.7
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 1.7e-30 137.5 191 41.9
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.2e-30 137.1 277 34.3
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.9e-30 136.7 186 40.9
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 2.9e-30 136.7 284 33.5
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 3.7e-30 136.3 286 33.9
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 4.9e-30 136.0 182 42.9
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 4.9e-30 136.0 181 43.6
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 4.9e-30 136.0 187 44.4
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 4.9e-30 136.0 188 40.4
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 6.4e-30 135.6 278 34.2
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 8.3e-30 135.2 293 34.5
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 8.3e-30 135.2 277 33.9
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 8.3e-30 135.2 187 40.1
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 8.3e-30 135.2 187 40.1
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 1.1e-29 134.8 186 40.9
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 1.4e-29 134.4 188 41.5
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.4e-29 133.7 275 33.1
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 2.4e-29 133.7 177 43.5
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 3.2e-29 133.3 198 41.9
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 3.2e-29 133.3 292 34.2
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 3.2e-29 133.3 185 42.2
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 4.1e-29 132.9 190 40.0
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 5.4e-29 132.5 210 40.0
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 5.4e-29 132.5 196 40.3
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 7.0e-29 132.1 283 34.3
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 7.0e-29 132.1 298 33.2
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 7.0e-29 132.1 196 39.8
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 7.0e-29 132.1 177 41.8
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 7.0e-29 132.1 190 42.1
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 9.2e-29 131.7 182 42.3
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 9.2e-29 131.7 295 31.9
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 9.2e-29 131.7 189 43.9
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 9.2e-29 131.7 287 33.8
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 1.2e-28 131.3 292 32.5
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 1.6e-28 131.0 296 32.8
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 2.7e-28 130.2 284 33.8
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.7e-28 130.2 291 32.6
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 5.9e-28 129.0 186 39.2
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 7.8e-28 128.6 192 41.1
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 7.8e-28 128.6 184 42.4
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 2.3e-27 127.1 188 41.5
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 3.9e-27 126.3 281 32.7
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 5.0e-27 125.9 190 39.5
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 8.6e-27 125.2 191 39.3
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 1.1e-26 124.8 187 40.1
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 2.5e-26 123.6 279 34.1
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 4.3e-26 122.9 291 31.3
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 2.6e-23 113.6 167 40.1
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 3.4e-23 113.2 269 32.3
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 3.4e-23 113.2 280 31.1
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.2e-22 110.5 191 35.6
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.5e-18 97.1 265 29.1
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 5.6e-18 95.9 261 30.7
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 1.2e-17 94.7 269 31.6
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 1.2e-17 94.7 269 31.6
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 2.2e-14 84.0 185 31.9
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.2e-14 84.0 185 31.9
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 5.1e-11 72.8 88 44.3
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 3.3e-10 70.1 60 58.3
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 4.7e-09 66.2 166 30.1
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 9.9e-07 58.5 49 57.1


User provided reference genes

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