Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 7.0e-108 394.0 209 100.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.1e-32 143.3 212 41.5
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.1e-32 143.3 212 41.5
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.8e-32 142.9 212 42.0
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 2.8e-32 142.9 212 42.0
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.2e-32 141.7 212 41.5
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 8.1e-32 141.4 220 40.9
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.1e-31 141.0 212 41.0
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.8e-31 140.2 212 40.6
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 3.1e-31 139.4 212 42.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 5.3e-31 138.7 210 41.4
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 6.9e-31 138.3 210 41.4
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 6.9e-31 138.3 209 40.7
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 9.0e-31 137.9 209 40.7
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.2e-30 137.5 207 40.1
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.2e-30 137.5 211 39.3
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.5e-30 137.1 211 40.3
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.5e-30 137.1 209 39.7
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.0e-30 136.7 212 39.2
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.0e-30 136.7 211 40.8
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.6e-30 136.3 208 40.4
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.6e-30 136.3 208 40.9
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 3.4e-30 136.0 209 39.7
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 4.5e-30 135.6 212 38.7
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 4.5e-30 135.6 212 41.0
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 5.8e-30 135.2 209 39.2
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 5.8e-30 135.2 212 38.2
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 5.8e-30 135.2 209 38.8
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 7.6e-30 134.8 211 41.7
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 7.6e-30 134.8 212 40.1
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 9.9e-30 134.4 209 38.8
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.3e-29 134.0 211 41.2
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.3e-29 134.0 212 38.2
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.3e-29 134.0 212 38.2
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 2.2e-29 133.3 209 38.3
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 2.2e-29 133.3 209 39.7
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 2.9e-29 132.9 212 39.2
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.8e-29 132.5 211 39.8
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 3.8e-29 132.5 212 38.7
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 3.8e-29 132.5 212 37.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 3.8e-29 132.5 212 38.2
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 4.9e-29 132.1 209 38.8
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 4.9e-29 132.1 212 38.7
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 4.9e-29 132.1 211 38.4
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.9e-29 132.1 212 38.7
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 6.4e-29 131.7 209 38.3
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 8.4e-29 131.3 212 38.2
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.1e-28 131.0 209 38.3
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.1e-28 131.0 209 37.8
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.1e-28 131.0 209 37.8
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.1e-28 131.0 209 37.8
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.1e-28 131.0 209 37.8
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.1e-28 131.0 209 37.8
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.4e-28 130.6 207 38.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.4e-28 130.6 212 37.7
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 1.9e-28 130.2 209 37.3
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.9e-28 130.2 212 36.8
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.9e-28 130.2 209 39.2
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 3.2e-28 129.4 212 37.7
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 5.4e-28 128.6 212 37.7
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 5.4e-28 128.6 211 38.9
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 9.3e-28 127.9 207 37.2
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 9.3e-28 127.9 209 37.3
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 9.3e-28 127.9 209 37.8
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.6e-27 127.1 208 38.9
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.6e-27 127.1 212 36.8
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.7e-27 126.3 211 37.9
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.0e-26 124.4 204 39.7
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.8e-26 123.6 210 37.6
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 3.0e-26 122.9 212 37.7
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 3.9e-26 122.5 212 37.7
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 3.9e-26 122.5 235 35.3
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.9e-26 122.5 209 35.9
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 5.1e-26 122.1 208 37.0
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 6.7e-26 121.7 209 36.8
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 2.5e-25 119.8 207 36.7
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.5e-25 119.8 206 37.4
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 3.3e-25 119.4 240 32.9
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 3.3e-25 119.4 240 32.9
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.6e-24 117.1 235 34.0
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.6e-24 117.1 212 37.3
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.6e-24 117.1 212 37.7
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 4.8e-24 115.5 195 37.4
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 6.2e-24 115.2 176 41.5
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 6.2e-24 115.2 183 37.2
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 3.1e-23 112.8 212 37.3
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 6.9e-23 111.7 201 38.3
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 9.0e-23 111.3 186 36.6
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.2e-22 110.9 171 43.9
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 1.5e-22 110.5 183 35.5
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.5e-22 110.5 177 41.8
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 2.0e-22 110.2 212 35.4
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 2.0e-22 110.2 186 37.1
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 2.0e-22 110.2 191 38.7
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 4.5e-22 109.0 186 37.6
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 2.2e-21 106.7 183 38.8
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.9e-21 105.5 183 35.5
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 4.2e-20 102.4 212 33.5
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.5e-19 99.4 212 34.9
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 4.3e-17 92.4 149 43.0
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 5.7e-17 92.0 195 35.4
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 6.9e-15 85.1 141 44.0
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.5e-14 84.0 134 43.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.5e-14 84.0 184 32.6
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.0e-14 83.6 186 32.3
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 3.4e-14 82.8 209 33.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 5.8e-14 82.0 91 49.5
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.2e-13 80.1 222 29.3
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.4e-12 77.4 143 35.7
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.7e-11 73.2 111 40.5
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 8.7e-10 68.2 103 42.7
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 1.3e-08 64.3 115 40.9
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.6e-08 63.9 127 37.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.8e-07 60.5 187 32.6
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.8e-07 60.5 111 40.5
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.8e-07 60.5 86 33.7
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.5e-06 57.4 90 34.4


User provided reference genes

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