Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 5.9e-169 597.4 298 100.0
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 2.9e-51 206.5 297 41.4
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 9.8e-47 191.4 288 40.6
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 2.2e-46 190.3 285 40.4
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 2.8e-46 189.9 288 40.6
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 2.8e-46 189.9 288 39.2
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 2.8e-46 189.9 288 39.6
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 3.7e-46 189.5 286 40.2
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 3.7e-46 189.5 285 42.1
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 3.1e-45 186.4 290 39.3
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 4.1e-45 186.0 285 39.6
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 4.1e-45 186.0 283 42.0
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 4.1e-45 186.0 288 39.6
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 5.4e-45 185.7 290 40.0
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 5.4e-45 185.7 288 43.4
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 5.4e-45 185.7 292 39.0
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 5.4e-45 185.7 286 40.2
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 7.0e-45 185.3 295 39.0
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 7.0e-45 185.3 296 40.2
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 9.1e-45 184.9 288 38.9
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 1.2e-44 184.5 286 39.9
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 1.6e-44 184.1 285 41.1
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 1.6e-44 184.1 285 41.1
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 2.0e-44 183.7 285 40.7
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 2.0e-44 183.7 289 39.1
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 2.0e-44 183.7 286 39.9
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 2.7e-44 183.3 289 40.1
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 3.5e-44 183.0 285 41.1
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 5.9e-44 182.2 285 36.8
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 5.9e-44 182.2 288 38.9
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 5.9e-44 182.2 287 39.7
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 7.7e-44 181.8 286 39.2
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 1.0e-43 181.4 285 39.6
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 1.0e-43 181.4 296 39.5
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.0e-43 181.4 287 39.0
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 1.3e-43 181.0 285 40.0
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 1.7e-43 180.6 286 42.0
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 1.7e-43 180.6 288 40.3
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 2.2e-43 180.3 295 40.7
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 2.9e-43 179.9 285 40.7
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 2.9e-43 179.9 288 39.6
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 2.9e-43 179.9 289 38.1
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 2.9e-43 179.9 288 38.2
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 2.9e-43 179.9 285 40.4
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 2.9e-43 179.9 285 39.6
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 6.5e-43 178.7 288 38.9
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.1e-42 177.9 289 37.7
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 1.1e-42 177.9 288 37.5
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.1e-42 177.9 288 38.2
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.5e-42 177.6 289 37.7
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 1.9e-42 177.2 285 38.9
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.9e-42 177.2 288 39.2
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 2.5e-42 176.8 288 39.2
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.5e-42 176.8 285 38.6
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 2.5e-42 176.8 288 37.8
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 3.2e-42 176.4 288 39.2
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 3.2e-42 176.4 288 37.8
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 5.5e-42 175.6 311 37.3
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 5.5e-42 175.6 285 40.0
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 5.5e-42 175.6 286 39.5
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.2e-41 174.5 288 38.2
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 1.2e-41 174.5 288 37.8
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.1e-41 173.7 286 39.5
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.7e-41 173.3 286 39.2
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 3.6e-41 172.9 283 38.9
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 6.1e-41 172.2 275 39.3
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 6.1e-41 172.2 287 36.2
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 8.0e-41 171.8 288 38.5
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.0e-40 171.4 276 39.5
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 1.0e-40 171.4 282 39.4
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 1.4e-40 171.0 280 38.9
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 1.8e-40 170.6 287 39.0
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 2.3e-40 170.2 288 37.8
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 2.3e-40 170.2 288 37.8
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 3.0e-40 169.9 285 37.5
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 6.8e-40 168.7 285 36.5
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 1.2e-39 167.9 275 38.2
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 1.2e-39 167.9 285 36.1
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 1.5e-39 167.5 288 36.5
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.5e-39 167.5 285 37.5
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 2.0e-39 167.2 285 38.9
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 3.4e-39 166.4 285 37.2
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 3.4e-39 166.4 284 38.4
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 3.4e-39 166.4 285 38.2
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 4.4e-39 166.0 288 36.5
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 9.8e-39 164.9 285 36.1
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 3.7e-38 162.9 287 37.3
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 4.9e-38 162.5 285 36.5
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 1.1e-37 161.4 286 38.5
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 1.8e-37 160.6 278 37.8
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 7.0e-37 158.7 303 35.0
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 2.0e-36 157.1 296 35.1
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 1.0e-35 154.8 285 36.5
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 1.0e-35 154.8 285 35.4
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 1.9e-34 150.6 288 33.3
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 1.2e-33 147.9 232 35.8
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 6.1e-33 145.6 295 34.6
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 8.0e-33 145.2 233 36.9
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 8.9e-32 141.7 289 33.6
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 2.2e-30 137.1 287 34.5
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 3.9e-27 126.3 284 33.8
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 3.3e-26 123.2 106 50.9
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 5.6e-26 122.5 288 32.6
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 4.7e-25 119.4 227 38.3
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 2.0e-23 114.0 155 37.4
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 4.4e-23 112.8 102 51.0
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 3.5e-20 103.2 95 49.5
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 4.6e-20 102.8 116 44.0
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 2.5e-18 97.1 229 31.9
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 9.5e-18 95.1 111 44.1
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 9.5e-18 95.1 139 39.6
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 6.2e-17 92.4 192 33.3
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.7e-14 84.3 172 38.4
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 4.1e-13 79.7 167 36.5
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 5.4e-13 79.3 148 39.2
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 9.2e-13 78.6 215 32.6
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 1.2e-12 78.2 215 32.1
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 1.2e-12 78.2 215 32.1
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 1.2e-12 78.2 91 40.7
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 1.3e-11 74.7 167 37.1
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 2.3e-11 73.9 215 31.6
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.5e-10 70.5 58 50.0
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 2.5e-10 70.5 54 51.9
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 5.6e-10 69.3 55 56.4
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 1.2e-09 68.2 194 27.3
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 1.2e-09 68.2 55 54.5
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 2.1e-09 67.4 169 34.9
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 6.2e-09 65.9 55 50.9
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.4e-08 64.7 55 49.1
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 8.4e-06 55.5 102 44.1


User provided reference genes

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