Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003704 Prasinoderma coloniale HOM05D012794 ORTHO05D017318 0.0e+00 1472.6 783 100.0
AagrBONN_evm.TU.Sc2ySwM_362.576 Anthoceros agrestis HOM05D012794 ORTHO05D017318 2.3e-119 434.1 656 39.8
CBR_g3290 Chara braunii HOM05D012794 ORTHO05D017318 1.8e-108 397.9 966 32.7
Mapoly0055s0096 Marchantia polymorpha HOM05D012794 ORTHO05D017318 4.6e-104 383.3 853 31.7
Cre12.g520950 Chlamydomonas reinhardtii HOM05D012794 ORTHO05D017318 1.6e-101 374.8 992 31.7
SMO145G0034 Selaginella moellendorffii HOM05D012794 ORTHO05D017318 6.7e-79 299.7 319 44.5
Pp3c16_25560 Physcomitrium patens HOM05D012794 ORTHO05D017318 9.7e-78 295.8 749 31.4
Pp3c16_25571 Physcomitrium patens HOM05D012794 ORTHO05D017318 9.7e-78 295.8 749 31.4
MCO01G077 Micromonas commoda HOM05D012794 ORTHO05D017318 5.5e-73 280.0 425 40.0
CBR_g56035 Chara braunii HOM05D012794 ORTHO05D028758 1.3e-69 268.9 413 37.0
PRCOL_00000101 Prasinoderma coloniale HOM05D012794 ORTHO05D028758 2.8e-69 267.7 406 37.7
MCO15G527 Micromonas commoda HOM05D012794 ORTHO05D028758 4.5e-67 260.4 419 37.7
Cre12.g536550 Chlamydomonas reinhardtii HOM05D012794 ORTHO05D028758 1.0e-66 259.2 412 38.3
PRCOL_00000409 Prasinoderma coloniale HOM05D020880 ORTHO05D013717 5.5e-33 147.1 369 28.2
CBR_g32153 Chara braunii HOM05D020880 ORTHO05D013717 1.6e-27 129.0 432 26.2
Cre12.g506000 Chlamydomonas reinhardtii HOM05D020880 ORTHO05D013717 3.6e-24 117.9 347 25.6
MCO03G594 Micromonas commoda HOM05D020880 ORTHO05D013717 6.1e-24 117.1 317 26.2
Cfa024144 Carpinus fangiana HOM05D020880 ORTHO05D013717 8.3e-21 106.7 383 27.7
AagrBONN_evm.TU.Sc2ySwM_368.2239 Anthoceros agrestis HOM05D014295 ORTHO05D013717 3.7e-13 81.3 408 24.5
PRCOL_00003264 Prasinoderma coloniale HOM05D014295 ORTHO05D013717 3.7e-13 81.3 427 23.4
Cre16.g674515 Chlamydomonas reinhardtii HOM05D014295 ORTHO05D013717 4.6e-11 74.3 416 21.6
PRCOL_00004596 Prasinoderma coloniale HOM05D023138 ORTHO05D019631 4.6e-11 74.3 358 24.0
Mapoly0014s0208 Marchantia polymorpha HOM05D014295 ORTHO05D013717 3.9e-10 71.2 421 24.5
Cpa.g.sc83.92 Carica papaya HOM05D003753 ORTHO05D005081 9.5e-09 66.6 118 32.2
Aqoxy5G01827 Aquilegia oxysepala HOM05D000347 ORTHO05D001997 3.6e-08 64.7 135 35.6
Nitab4.5_0005634g0050 Nicotiana tabacum HOM05D003753 ORTHO05D005081 1.1e-07 63.2 116 33.6
Nitab4.5_0011030g0020 Nicotiana tabacum HOM05D003753 ORTHO05D005081 1.1e-07 63.2 116 33.6
CAN.G732.16 Capsicum annuum HOM05D003753 ORTHO05D005081 3.1e-07 61.6 115 33.0
Peaxi162Scf00083g00426 Petunia axillaris HOM05D003753 ORTHO05D005081 5.2e-07 60.8 116 32.8
Oeu000196.1 Olea europaea HOM05D000347 ORTHO05D001997 6.8e-07 60.5 129 33.3
HPP92_002480 Vanilla planifolia HOM05D000347 ORTHO05D001997 8.9e-07 60.1 129 34.9
Glyma.13G350500 Glycine max HOM05D002302 ORTHO05D002728 1.5e-06 59.3 104 35.6
Lsat_1_v5_gn_2_117981 Lactuca sativa HOM05D003753 ORTHO05D005081 1.5e-06 59.3 126 29.4
AT2G16780 Arabidopsis thaliana HOM05D000347 ORTHO05D001997 2.6e-06 58.5 89 34.8
Lalb_Chr22g0351771 Lupinus albus HOM05D002302 ORTHO05D002728 2.6e-06 58.5 81 34.6
SMO169G0114 Selaginella moellendorffii HOM05D003753 ORTHO05D005081 2.6e-06 58.5 159 28.9
AUR62029071 Chenopodium quinoa HOM05D002302 ORTHO05D002728 4.4e-06 57.8 80 32.5
AUR62033965 Chenopodium quinoa HOM05D002302 ORTHO05D002728 4.4e-06 57.8 80 32.5
ECA236G2053 Erigeron canadensis HOM05D003753 ORTHO05D005081 4.4e-06 57.8 126 28.6
Lalb_Chr23g0265001 Lupinus albus HOM05D000347 ORTHO05D001997 5.8e-06 57.4 86 38.4
BcaB01g04481 Brassica carinata HOM05D000347 ORTHO05D001997 7.5e-06 57.0 129 31.8
C06p03440 Brassica napus HOM05D000645 ORTHO05D000494 7.5e-06 57.0 130 31.5
Manes.04G075900 Manihot esculenta HOM05D000347 ORTHO05D001997 7.5e-06 57.0 122 29.5
Phvul.011G035800 Phaseolus vulgaris HOM05D000347 ORTHO05D001997 7.5e-06 57.0 89 37.1
Sc18g0001970 Simmondsia chinensis HOM05D002302 ORTHO05D002728 7.5e-06 57.0 80 33.8
vmacro17237 Vaccinium macrocarpon HOM05D002302 ORTHO05D002728 7.5e-06 57.0 80 33.8
Ca_01196_v3 Cicer arietinum L. HOM05D002302 ORTHO05D002728 9.9e-06 56.6 104 33.7
Ca_01199_v3 Cicer arietinum L. HOM05D002302 ORTHO05D002728 9.9e-06 56.6 104 33.7
DCAR_013994 Daucus carota HOM05D000347 ORTHO05D001997 9.9e-06 56.6 131 32.8
Migut.N01033 Erythranthe guttata HOM05D000347 ORTHO05D001997 9.9e-06 56.6 126 31.7
FAN26G3045 Fragaria x ananassa HOM05D002302 ORTHO05D002728 9.9e-06 56.6 80 36.2


User provided reference genes

Program Settings