Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.0e-277 959.5 511 100.0
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 5.5e-114 415.6 432 54.6
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 3.1e-109 399.8 443 50.1
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 3.1e-109 399.8 458 49.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 5.3e-109 399.1 440 49.1
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.2e-108 397.9 442 50.7
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 5.8e-108 395.6 459 48.6
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.1e-106 391.3 441 48.8
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.1e-106 391.3 427 49.4
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.9e-106 390.6 438 48.4
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.9e-106 390.6 435 49.7
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 2.5e-106 390.2 441 47.6
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 2.5e-106 390.2 438 48.4
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 4.2e-106 389.4 441 49.0
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 4.2e-106 389.4 430 49.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 9.3e-106 388.3 441 48.5
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 9.3e-106 388.3 424 49.5
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 1.2e-105 387.9 439 49.0
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 3.5e-105 386.3 426 49.1
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 4.6e-105 386.0 424 48.6
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 6.0e-105 385.6 455 47.3
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 7.9e-105 385.2 441 47.4
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 7.9e-105 385.2 424 49.1
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 7.9e-105 385.2 442 48.6
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 7.9e-105 385.2 438 46.6
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 1.0e-104 384.8 424 48.6
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.0e-104 384.8 424 48.8
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 1.3e-104 384.4 435 48.3
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.8e-104 384.0 424 49.1
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.8e-104 384.0 424 48.6
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 2.3e-104 383.6 445 48.3
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 3.0e-104 383.3 435 47.8
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 3.0e-104 383.3 425 48.2
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 3.9e-104 382.9 443 47.4
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 3.9e-104 382.9 435 48.5
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.9e-104 382.9 424 48.1
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 5.1e-104 382.5 457 46.2
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 5.1e-104 382.5 441 48.3
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 6.7e-104 382.1 438 47.5
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 1.9e-103 380.6 424 48.8
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.9e-103 380.6 424 48.3
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.9e-103 380.6 439 48.1
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.5e-103 380.2 464 45.9
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.5e-103 380.2 425 48.2
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 3.3e-103 379.8 446 47.3
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 4.3e-103 379.4 426 49.5
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 4.3e-103 379.4 430 48.8
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 4.3e-103 379.4 441 46.7
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 7.4e-103 378.6 424 47.9
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 7.4e-103 378.6 425 48.0
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 7.4e-103 378.6 438 47.7
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 7.4e-103 378.6 437 47.6
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.6e-102 377.5 449 46.3
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.6e-102 377.5 424 47.6
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 2.2e-102 377.1 425 48.9
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 3.7e-102 376.3 439 46.5
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 3.7e-102 376.3 425 48.9
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 3.7e-102 376.3 425 48.0
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.7e-102 376.3 446 47.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 3.7e-102 376.3 440 47.0
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 4.8e-102 375.9 429 47.8
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 4.8e-102 375.9 424 47.6
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 4.8e-102 375.9 445 47.4
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 6.3e-102 375.6 435 46.7
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 6.3e-102 375.6 425 47.5
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.1e-101 374.8 425 47.8
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.1e-101 374.8 422 48.1
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 1.1e-101 374.8 444 45.9
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.4e-101 374.4 428 49.5
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 2.4e-101 373.6 424 47.4
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.1e-101 372.9 424 47.4
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.1e-101 372.9 424 47.4
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 4.1e-101 372.9 424 47.6
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 5.3e-101 372.5 446 46.4
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 6.9e-101 372.1 438 46.8
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 9.0e-101 371.7 439 47.4
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.2e-100 371.3 424 47.6
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.5e-100 370.9 424 47.2
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.6e-100 370.2 443 46.3
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 4.5e-100 369.4 462 44.8
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 7.6e-100 368.6 410 49.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 3.8e-99 366.3 473 43.8
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 6.5e-99 365.5 426 46.9
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 8.5e-99 365.2 416 47.4
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 1.9e-98 364.0 428 47.2
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 1.2e-97 361.3 443 45.8
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 3.6e-97 359.8 435 44.8
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.6e-97 359.8 424 46.0
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 4.6e-97 359.4 399 48.6
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 7.9e-97 358.6 460 44.6
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 2.5e-95 353.6 434 45.4
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.3e-95 353.2 425 47.1
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.7e-94 350.9 431 47.1
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 2.2e-94 350.5 464 43.8
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 2.2e-94 350.5 424 45.3
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 2.2e-94 350.5 446 44.4
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.8e-93 347.4 401 47.9
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.2e-89 334.7 461 43.6
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.6e-89 334.3 425 44.2
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 2.1e-89 334.0 405 46.4
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 3.9e-88 329.7 452 42.3
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 6.7e-88 328.9 367 48.8
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.5e-87 327.8 469 40.9
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.5e-87 327.8 392 46.9
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 2.8e-86 323.6 453 42.4
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 2.0e-84 317.4 475 41.7
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 6.1e-81 305.8 490 39.6
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 6.7e-80 302.4 417 41.7
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 3.3e-79 300.1 437 41.0
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.3e-78 295.8 438 41.3
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.5e-74 284.6 307 50.8
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 8.8e-72 275.4 435 39.1
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 1.5e-71 274.6 426 41.3
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.0e-68 264.2 265 52.8
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.4e-53 214.2 310 40.3
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 4.1e-45 186.8 417 33.3
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 3.5e-44 183.7 179 52.5
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.7e-35 154.8 108 65.7
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 9.9e-31 139.0 375 30.4
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 1.2e-23 115.5 343 26.5
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.3e-22 112.1 157 38.9
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 4.3e-18 97.1 104 45.2
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 4.7e-17 93.6 544 25.7
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 6.2e-17 93.2 112 44.6
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 1.2e-15 89.0 283 29.3
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 1.5e-15 88.6 137 40.1
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 3.4e-15 87.4 105 45.7
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 9.3e-13 79.3 83 50.6
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.7e-11 75.1 49 67.3
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 8.1e-09 66.2 92 39.1
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 5.8e-07 60.1 93 37.6


User provided reference genes

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