Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 4.8e-236 820.8 440 100.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 6.9e-41 172.6 411 34.3
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 5.0e-39 166.4 357 36.7
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 6.5e-39 166.0 410 33.2
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 8.5e-39 165.6 410 33.2
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.6e-37 161.4 370 34.1
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 2.1e-37 161.0 367 35.4
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 2.1e-37 161.0 429 33.3
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 3.6e-37 160.2 368 33.7
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 3.6e-37 160.2 430 33.3
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 4.6e-37 159.8 413 32.9
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 7.9e-37 159.1 411 32.6
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.8e-36 157.9 368 33.7
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 2.3e-36 157.5 410 32.0
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 3.0e-36 157.1 412 32.5
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 3.0e-36 157.1 357 33.6
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 3.9e-36 156.8 366 34.7
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 3.9e-36 156.8 411 33.1
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 3.9e-36 156.8 410 32.0
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 5.1e-36 156.4 368 33.7
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 5.1e-36 156.4 411 33.3
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 5.1e-36 156.4 408 30.9
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 5.1e-36 156.4 368 33.2
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 6.7e-36 156.0 415 32.3
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 6.7e-36 156.0 355 33.0
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 6.7e-36 156.0 418 34.0
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.5e-35 154.8 412 32.3
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.5e-35 154.8 369 33.1
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 2.0e-35 154.5 374 31.6
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 2.0e-35 154.5 410 32.0
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 2.0e-35 154.5 366 33.1
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 2.5e-35 154.1 411 32.6
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 2.5e-35 154.1 361 34.6
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 2.5e-35 154.1 434 31.3
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.5e-35 154.1 374 32.4
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 2.5e-35 154.1 368 32.6
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 4.3e-35 153.3 369 32.5
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 5.7e-35 152.9 370 31.9
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 5.7e-35 152.9 424 31.6
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 7.4e-35 152.5 410 31.7
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 7.4e-35 152.5 412 33.3
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 9.7e-35 152.1 367 33.2
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 9.7e-35 152.1 365 33.2
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 9.7e-35 152.1 412 32.0
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 9.7e-35 152.1 368 32.6
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 9.7e-35 152.1 414 32.9
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 1.3e-34 151.8 365 33.4
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.7e-34 151.4 412 31.8
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 1.7e-34 151.4 431 30.6
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.7e-34 151.4 422 32.7
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.2e-34 151.0 410 31.7
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 2.2e-34 151.0 412 34.0
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 3.7e-34 150.2 413 31.0
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 4.8e-34 149.8 318 36.2
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 6.3e-34 149.4 360 32.2
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 6.3e-34 149.4 366 32.8
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 6.3e-34 149.4 366 31.1
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 8.2e-34 149.1 415 31.3
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 8.2e-34 149.1 409 30.6
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 8.2e-34 149.1 415 30.8
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 1.4e-33 148.3 409 31.5
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.8e-33 147.9 417 32.9
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 1.8e-33 147.9 431 30.9
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 2.4e-33 147.5 429 29.6
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 4.1e-33 146.7 425 31.5
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 4.1e-33 146.7 324 34.9
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 4.1e-33 146.7 412 32.5
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 6.9e-33 146.0 411 30.7
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.2e-32 145.2 314 35.7
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 1.2e-32 145.2 354 33.1
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.5e-32 144.8 368 31.8
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 2.0e-32 144.4 372 31.5
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.0e-32 144.4 255 40.4
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.6e-32 144.1 418 30.9
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 3.4e-32 143.7 426 29.8
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 3.4e-32 143.7 414 31.2
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 5.9e-32 142.9 352 31.5
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 7.7e-32 142.5 408 31.1
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 1.3e-31 141.7 420 33.6
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.3e-31 141.7 422 30.8
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 2.9e-31 140.6 367 31.1
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.9e-31 140.6 396 32.3
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 3.8e-31 140.2 364 32.1
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 6.5e-31 139.4 411 29.4
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 6.5e-31 139.4 365 30.4
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.1e-30 138.7 366 30.6
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.9e-30 137.9 417 30.2
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.9e-30 137.9 368 31.2
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 2.5e-30 137.5 308 34.7
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 2.5e-30 137.5 337 31.8
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 3.2e-30 137.1 375 30.9
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 3.2e-30 137.1 368 31.0
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 7.2e-30 136.0 366 30.9
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 2.7e-29 134.0 266 35.0
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 3.6e-29 133.7 325 32.6
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 4.7e-29 133.3 412 30.3
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 2.3e-28 131.0 412 31.1
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 2.3e-28 131.0 406 31.0
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 1.5e-27 128.3 271 35.1
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.7e-26 123.6 417 31.2
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.4e-25 120.9 425 28.7
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 1.2e-24 118.6 416 30.0
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 2.6e-24 117.5 438 27.6
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 5.9e-24 116.3 297 32.0
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 6.5e-23 112.8 355 32.7
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 4.4e-19 100.1 269 31.6
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 5.7e-19 99.8 200 34.0
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.3e-18 98.6 185 39.5
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 9.1e-17 92.4 228 33.8
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.7e-16 90.9 250 29.2
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 3.5e-16 90.5 173 35.8
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 4.5e-16 90.1 128 42.2
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 5.9e-16 89.7 226 33.2
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.9e-15 87.4 214 32.2
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.9e-14 84.7 199 30.7
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 9.4e-14 82.4 120 43.3
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.0e-12 79.0 265 30.6
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 3.0e-12 77.4 223 31.4
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 8.8e-12 75.9 265 28.7
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 3.1e-09 67.4 138 33.3
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 2.7e-08 64.3 185 30.8
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 3.5e-08 63.9 140 32.9
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 4.5e-08 63.5 100 41.0
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 2.2e-07 61.2 195 27.2
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 6.5e-07 59.7 135 31.1


User provided reference genes

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