Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.6e-183 646.0 323 100.0
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 4.1e-123 445.3 312 71.2
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 2.6e-122 442.6 310 70.6
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 3.4e-122 442.2 312 70.5
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 6.5e-121 438.0 312 69.6
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 5.5e-120 434.9 313 65.8
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 1.2e-119 433.7 312 70.5
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-118 430.6 312 68.3
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 3.9e-118 428.7 312 67.9
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.5e-117 426.8 312 69.2
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 1.5e-117 426.8 312 68.9
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 2.0e-117 426.4 312 68.6
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 2.0e-117 426.4 312 68.6
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 4.4e-117 425.2 315 67.9
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 7.4e-117 424.5 312 67.9
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 7.4e-117 424.5 312 67.9
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 1.7e-116 423.3 312 67.9
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.7e-116 423.3 312 67.9
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.7e-116 423.3 312 67.3
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.2e-116 422.9 312 67.3
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 2.2e-116 422.9 312 67.3
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 2.8e-116 422.5 312 67.3
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.8e-116 422.5 312 67.6
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 2.8e-116 422.5 312 67.6
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 2.8e-116 422.5 312 67.6
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 2.8e-116 422.5 312 67.6
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 3.7e-116 422.2 312 67.6
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 4.8e-116 421.8 312 67.3
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.8e-116 421.8 312 67.3
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.8e-116 421.8 312 67.9
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.8e-116 421.8 312 68.3
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 4.8e-116 421.8 312 67.3
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 6.3e-116 421.4 320 66.6
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 6.3e-116 421.4 312 67.9
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 6.3e-116 421.4 312 67.0
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 6.3e-116 421.4 312 67.0
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 6.3e-116 421.4 312 66.7
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 6.3e-116 421.4 312 67.9
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 8.2e-116 421.0 312 67.9
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 8.2e-116 421.0 312 67.3
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 8.2e-116 421.0 312 68.3
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 8.2e-116 421.0 312 68.3
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 1.1e-115 420.6 312 67.0
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.1e-115 420.6 317 64.7
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.4e-115 420.2 312 67.0
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.4e-115 420.2 312 67.0
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.8e-115 419.9 312 67.3
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 1.8e-115 419.9 312 67.6
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.8e-115 419.9 312 67.9
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.8e-115 419.9 312 66.7
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.8e-115 419.9 312 67.9
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.8e-115 419.9 310 67.1
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 2.4e-115 419.5 312 67.6
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 3.1e-115 419.1 312 67.6
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 3.1e-115 419.1 312 66.3
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 3.1e-115 419.1 312 67.6
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 4.1e-115 418.7 312 67.0
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 4.1e-115 418.7 315 66.0
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 5.3e-115 418.3 312 67.9
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 5.3e-115 418.3 312 67.3
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 5.3e-115 418.3 312 67.3
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 5.3e-115 418.3 312 67.0
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 5.3e-115 418.3 309 67.6
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 6.9e-115 417.9 312 66.3
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 6.9e-115 417.9 310 66.8
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 6.9e-115 417.9 312 66.7
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 6.9e-115 417.9 312 67.0
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 9.1e-115 417.5 312 66.7
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 1.2e-114 417.2 312 66.7
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 1.2e-114 417.2 312 67.0
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 1.2e-114 417.2 312 66.7
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 1.2e-114 417.2 312 65.7
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 1.5e-114 416.8 312 66.0
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 1.5e-114 416.8 312 66.7
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 2.0e-114 416.4 312 66.3
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 2.0e-114 416.4 312 67.0
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 2.0e-114 416.4 312 66.7
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.0e-114 416.4 312 66.3
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.6e-114 416.0 312 66.7
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 2.6e-114 416.0 312 67.0
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 3.4e-114 415.6 312 67.3
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 4.5e-114 415.2 318 65.4
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 4.5e-114 415.2 312 66.7
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 4.5e-114 415.2 312 66.0
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 4.5e-114 415.2 312 66.0
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 4.5e-114 415.2 312 66.0
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 4.5e-114 415.2 312 66.7
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 4.5e-114 415.2 312 66.7
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 5.9e-114 414.8 312 66.3
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 7.7e-114 414.5 312 66.7
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 1.0e-113 414.1 312 66.0
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.7e-113 413.3 312 65.7
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.7e-113 413.3 312 64.7
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 1.7e-113 413.3 312 64.7
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 1.7e-113 413.3 312 66.0
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 1.7e-113 413.3 312 65.7
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 2.2e-113 412.9 312 65.7
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 2.2e-113 412.9 321 65.4
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 2.9e-113 412.5 312 66.0
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 5.0e-113 411.8 319 65.5
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 8.5e-113 411.0 312 66.0
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.1e-112 410.6 312 66.0
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.4e-112 410.2 314 65.6
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 4.7e-111 405.2 337 62.3
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.4e-110 403.7 329 63.2
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 3.0e-110 402.5 331 63.7
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 8.8e-110 401.0 345 60.6
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 1.5e-109 400.2 307 64.5
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 2.8e-108 396.0 294 67.7
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 1.6e-106 390.2 283 68.2
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 2.9e-105 386.0 333 59.5
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 1.1e-104 384.0 320 62.2
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.7e-103 379.4 312 61.5
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.4e-102 377.1 312 61.2
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 5.9e-98 361.7 270 67.8
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 6.5e-97 358.2 312 59.6
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 6.5e-97 358.2 312 59.6
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 3.2e-96 355.9 312 59.3
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 2.1e-95 353.2 309 57.6
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 4.0e-94 349.0 321 55.1
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 1.5e-93 347.1 309 56.3
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 1.5e-93 347.1 309 56.3
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 1.5e-93 347.1 309 56.3
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 2.0e-93 346.7 321 54.5
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 2.6e-93 346.3 321 54.8
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 3.4e-93 345.9 321 54.8
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 4.4e-93 345.5 321 54.5
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 4.4e-93 345.5 252 68.3
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 7.5e-93 344.7 321 54.5
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 6.3e-92 341.7 309 55.3
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.3e-89 334.0 309 55.3
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 3.4e-85 319.3 237 66.7
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 3.1e-83 312.8 314 57.3
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.3e-81 306.6 290 53.4
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 1.2e-79 300.8 221 66.5
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 2.6e-77 293.1 341 46.6
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 1.6e-74 283.9 229 64.2
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.7e-74 283.1 210 66.7
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 1.9e-59 233.8 162 74.1
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 2.4e-59 233.4 198 58.6
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 1.7e-57 227.3 236 53.0
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 3.0e-57 226.5 264 47.3
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 4.9e-52 209.1 169 59.8
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.4e-51 206.8 244 48.8
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 4.4e-45 186.0 316 37.0
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 6.6e-41 172.2 177 52.5
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 3.2e-35 153.3 239 39.7
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 4.3e-32 142.9 105 67.6
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 4.8e-31 139.4 105 67.6
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 4.8e-31 139.4 114 56.1
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 2.0e-29 134.0 175 44.6
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.7e-28 131.0 148 52.7
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 8.7e-25 118.6 95 55.8
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 1.9e-24 117.5 104 51.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.3e-23 114.8 82 61.0
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 6.9e-22 109.0 128 51.6
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 9.0e-22 108.6 95 52.6
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 4.9e-20 102.8 129 41.1
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.1e-19 101.7 137 46.0
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 7.1e-19 99.0 70 68.6
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.6e-18 97.8 107 44.9
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 2.3e-17 94.0 87 49.4
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 8.7e-17 92.0 73 56.2
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.4e-14 84.0 76 55.3
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 2.6e-13 80.5 94 47.9
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 7.7e-13 79.0 103 38.8
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 7.7e-13 79.0 103 38.8
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 1.0e-09 68.6 57 61.4
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 1.5e-08 64.7 47 66.0
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 3.7e-07 60.1 96 37.5
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 6.9e-06 55.8 46 60.9


User provided reference genes

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