Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 2.4e-75 285.4 145 100.0
MCO09G711 Micromonas commoda HOM05D007052 ORTHO05D008871 1.8e-30 136.3 144 50.0
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 1.0e-12 77.4 127 37.8
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 2.9e-12 75.9 127 36.2
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 1.9e-11 73.2 133 34.6
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 2.1e-10 69.7 128 34.4
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 4.6e-10 68.6 127 33.1
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.4e-09 67.0 136 32.4
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.8e-09 66.6 129 34.9
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 2.3e-09 66.2 127 34.6
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 2.3e-09 66.2 147 32.7
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 2.3e-09 66.2 127 33.1
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 2.3e-09 66.2 127 33.1
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 3.0e-09 65.9 127 33.9
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 5.1e-09 65.1 139 34.5
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 8.8e-09 64.3 139 31.7
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 1.1e-08 63.9 127 34.6
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 1.1e-08 63.9 127 34.6
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 1.1e-08 63.9 127 34.6
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 2.0e-08 63.2 127 34.6
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.0e-08 63.2 127 34.6
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 2.5e-08 62.8 127 33.9
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 2.5e-08 62.8 127 33.9
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 2.5e-08 62.8 127 31.5
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 2.5e-08 62.8 139 33.8
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 2.5e-08 62.8 127 30.7
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 2.5e-08 62.8 127 31.5
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 2.5e-08 62.8 127 33.9
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 3.3e-08 62.4 139 30.9
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 3.3e-08 62.4 127 34.6
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 3.3e-08 62.4 127 32.3
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 3.3e-08 62.4 127 33.1
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 3.3e-08 62.4 127 33.1
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 4.3e-08 62.0 127 33.1
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 4.3e-08 62.0 127 32.3
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 4.3e-08 62.0 125 33.6
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 5.7e-08 61.6 127 32.3
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 5.7e-08 61.6 139 30.9
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 5.7e-08 61.6 139 30.9
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 7.4e-08 61.2 127 32.3
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 7.4e-08 61.2 136 30.9
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 7.4e-08 61.2 128 32.8
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 9.7e-08 60.8 127 32.3
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 9.7e-08 60.8 127 33.9
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 9.7e-08 60.8 110 37.3
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 9.7e-08 60.8 127 30.7
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.3e-07 60.5 127 32.3
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 1.3e-07 60.5 136 30.9
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 1.3e-07 60.5 127 33.9
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.3e-07 60.5 127 31.5
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 1.7e-07 60.1 125 31.2
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 1.7e-07 60.1 127 32.3
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 1.7e-07 60.1 127 33.1
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 1.7e-07 60.1 127 33.9
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 2.2e-07 59.7 127 33.9
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 2.2e-07 59.7 128 32.0
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 2.2e-07 59.7 138 31.2
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 2.2e-07 59.7 127 30.7
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 2.2e-07 59.7 127 30.7
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 2.8e-07 59.3 140 31.4
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 2.8e-07 59.3 127 33.1
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 3.7e-07 58.9 128 30.5
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 4.8e-07 58.5 127 33.1
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 4.8e-07 58.5 127 30.7
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 4.8e-07 58.5 127 31.5
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 4.8e-07 58.5 127 31.5
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 6.3e-07 58.2 127 29.9
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 8.2e-07 57.8 128 32.0
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 1.1e-06 57.4 127 32.3
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 1.4e-06 57.0 127 31.5
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.8e-06 56.6 143 28.7
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 2.4e-06 56.2 127 31.5
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 5.3e-06 55.1 139 28.8


User provided reference genes

Program Settings