Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003309 Prasinoderma coloniale HOM05D005412 ORTHO05D006096 0.0e+00 3391.3 1850 100.0
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 8.5e-24 117.9 331 27.2
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 1.5e-23 117.1 318 27.4
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 3.2e-23 115.9 326 27.0
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 3.2e-23 115.9 326 28.8
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 3.6e-22 112.5 326 28.2
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 1.8e-21 110.2 403 27.3
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 2.3e-21 109.8 333 26.4
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 4.0e-21 109.0 391 27.4
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 4.0e-21 109.0 403 26.8
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 8.8e-21 107.8 392 27.0
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 8.8e-21 107.8 318 28.0
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 1.2e-20 107.5 310 28.4
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 1.2e-20 107.5 406 26.8
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 1.2e-20 107.5 369 25.7
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 1.5e-20 107.1 389 26.0
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 1.5e-20 107.1 319 27.9
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 2.0e-20 106.7 330 27.0
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 3.3e-20 105.9 353 28.0
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 5.7e-20 105.1 335 26.6
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 7.5e-20 104.8 394 26.6
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 7.5e-20 104.8 395 26.3
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 7.5e-20 104.8 303 27.4
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 7.5e-20 104.8 316 27.5
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 9.7e-20 104.4 395 26.3
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 9.7e-20 104.4 328 27.7
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 1.3e-19 104.0 369 26.0
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 2.2e-19 103.2 329 27.7
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 2.2e-19 103.2 320 27.5
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 2.8e-19 102.8 389 25.2
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 3.7e-19 102.4 389 25.2
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 6.3e-19 101.7 313 28.8
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 8.2e-19 101.3 397 25.7
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 8.2e-19 101.3 406 26.1
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 1.4e-18 100.5 325 27.4
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 1.4e-18 100.5 316 27.2
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 1.4e-18 100.5 389 25.7
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 2.4e-18 99.8 323 27.2
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 3.1e-18 99.4 328 25.6
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 3.1e-18 99.4 325 25.8
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 4.1e-18 99.0 323 27.6
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 4.1e-18 99.0 310 27.1
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 4.1e-18 99.0 397 25.7
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 4.1e-18 99.0 332 26.8
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 4.1e-18 99.0 328 26.5
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 7.0e-18 98.2 248 29.4
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 7.0e-18 98.2 317 26.5
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 9.1e-18 97.8 334 25.4
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 1.6e-17 97.1 317 28.1
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.0e-17 96.7 358 25.4
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 2.0e-17 96.7 391 25.6
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 2.7e-17 96.3 389 23.9
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 3.5e-17 95.9 333 26.7
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-17 95.5 289 29.4
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 4.5e-17 95.5 390 23.6
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 5.9e-17 95.1 337 26.4
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 5.9e-17 95.1 320 25.0
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 7.7e-17 94.7 332 25.6
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 1.0e-16 94.4 325 25.8
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 1.0e-16 94.4 325 24.9
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 1.0e-16 94.4 332 26.8
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 1.3e-16 94.0 343 26.5
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 1.3e-16 94.0 226 33.6
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 1.3e-16 94.0 398 24.9
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 1.7e-16 93.6 394 26.1
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 2.2e-16 93.2 317 24.9
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 2.2e-16 93.2 445 26.3
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 3.8e-16 92.4 341 24.9
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 3.8e-16 92.4 342 24.9
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 5.0e-16 92.0 393 25.4
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 5.0e-16 92.0 250 29.6
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 6.5e-16 91.7 319 27.0
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 8.5e-16 91.3 392 25.8
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 8.5e-16 91.3 394 24.6
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 1.1e-15 90.9 392 25.8
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 1.1e-15 90.9 392 25.8
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 1.1e-15 90.9 319 25.1
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 1.5e-15 90.5 303 23.8
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.9e-15 90.1 325 25.8
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 3.2e-15 89.4 400 23.8
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 4.2e-15 89.0 319 25.1
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 4.2e-15 89.0 308 23.7
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 5.5e-15 88.6 282 26.6
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 5.5e-15 88.6 928 21.2
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 7.2e-15 88.2 395 24.1
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 7.2e-15 88.2 319 25.7
Oeu025573.1 Olea europaea HOM05D005412 ORTHO05D006096 7.2e-15 88.2 195 29.7
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 9.4e-15 87.8 390 23.3
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 1.2e-14 87.4 401 23.9
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 1.6e-14 87.0 392 25.8
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 2.1e-14 86.7 287 24.0
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 2.7e-14 86.3 357 25.5
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.7e-14 86.3 313 25.9
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 4.7e-14 85.5 324 25.3
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 4.7e-14 85.5 857 21.1
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 8.0e-14 84.7 198 27.8
Actinidia00446 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.4e-13 84.0 184 28.3
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 1.8e-13 83.6 406 24.1
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 1.8e-13 83.6 386 23.3
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 4.0e-13 82.4 303 29.4
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 4.0e-13 82.4 324 23.8
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 3.4e-12 79.3 219 29.7
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 3.4e-12 79.3 309 23.6
HPP92_028321 Vanilla planifolia HOM05D005412 ORTHO05D006096 4.4e-12 79.0 104 40.4
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 4.8e-11 75.5 351 22.8
AUR62016617 Chenopodium quinoa HOM05D005412 ORTHO05D006096 1.1e-10 74.3 117 34.2
FvH4_2g06211 Fragaria vesca HOM05D005412 ORTHO05D006096 3.1e-10 72.8 117 32.5
TPR.G30995 Trifolium pratense HOM05D005412 ORTHO05D006096 1.6e-09 70.5 117 32.5
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 7.7e-09 68.2 394 23.6
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.5e-07 62.0 202 25.2
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 7.2e-07 61.6 200 26.0
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 1.6e-06 60.5 205 25.4
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 3.6e-06 59.3 171 27.5
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 3.6e-06 59.3 140 27.9


User provided reference genes

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