Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003089 Prasinoderma coloniale HOM05D002981 ORTHO05D049051 5.9e-110 401.0 217 100.0
MCO09G324 Micromonas commoda HOM05D002981 ORTHO05D049051 1.6e-54 216.9 209 55.0
MCO03G057 Micromonas commoda HOM05D002981 ORTHO05D036811 2.3e-21 106.7 224 39.3
MCO16G478 Micromonas commoda HOM05D002981 ORTHO05D008255 1.8e-18 97.1 166 36.7
PRCOL_00005944 Prasinoderma coloniale HOM05D002981 ORTHO05D036811 5.9e-17 92.0 156 35.9
Pp3c6_3120 Physcomitrium patens HOM05D007116 ORTHO05D008255 3.4e-09 66.2 78 39.7
SalBow3G0105 Salvia bowleyana HOM05D002981 ORTHO05D003725 5.9e-09 65.5 162 29.6
AagrBONN_evm.TU.Sc2ySwM_228.808 Anthoceros agrestis HOM05D002981 ORTHO05D003725 7.7e-09 65.1 139 34.5
THA.LOC104817468 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 1.7e-08 63.9 158 26.6
MSTRG.27951 Avicennia marina HOM05D002981 ORTHO05D003725 2.9e-08 63.2 164 25.6
CAN.G1273.1 Capsicum annuum HOM05D002981 ORTHO05D003725 2.9e-08 63.2 119 28.6
Carub.0004s3019 Capsella rubella HOM05D002981 ORTHO05D003725 5.0e-08 62.4 158 25.9
unitig_26.g10138 Utricularia gibba HOM05D002981 ORTHO05D003725 5.0e-08 62.4 153 27.5
CBR_g3892 Chara braunii HOM05D000172 ORTHO05D008255 6.5e-08 62.0 70 44.3
Peaxi162Scf00673g00127 Petunia axillaris HOM05D002981 ORTHO05D003725 6.5e-08 62.0 158 25.9
Thhalv10001515m.g Eutrema salsugineum HOM05D002981 ORTHO05D003725 8.5e-08 61.6 161 27.3
MD04G1195300 Malus domestica HOM05D002981 ORTHO05D003725 8.5e-08 61.6 161 29.2
Aqoxy2G02802 Aquilegia oxysepala HOM05D002981 ORTHO05D003725 1.1e-07 61.2 208 24.0
BcaB01g03165 Brassica carinata HOM05D002981 ORTHO05D003725 1.4e-07 60.8 207 25.1
Hund07135 Selenicereus undatus HOM05D002981 ORTHO05D003725 1.4e-07 60.8 152 25.7
AL4G47030 Arabidopsis lyrata HOM05D002981 ORTHO05D003725 1.9e-07 60.5 158 25.3
Cre07.g328150 Chlamydomonas reinhardtii HOM05D000172 ORTHO05D004529 1.9e-07 60.5 74 41.9
Migut.N02114 Erythranthe guttata HOM05D002981 ORTHO05D003725 2.5e-07 60.1 162 27.8
CSS0025736 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 4.2e-07 59.3 158 25.9
MD12G1207400 Malus domestica HOM05D002981 ORTHO05D003725 4.2e-07 59.3 161 28.0
CARHR142860 Cardamine hirsuta HOM05D002981 ORTHO05D003725 5.5e-07 58.9 119 26.1
Mapoly0016s0144 Marchantia polymorpha HOM05D002981 ORTHO05D003725 5.5e-07 58.9 135 31.9
PGSC0003DMG400002779 Solanum tuberosum HOM05D002981 ORTHO05D003725 5.5e-07 58.9 158 25.9
BcaC01g05028 Brassica carinata HOM05D002981 ORTHO05D003725 7.2e-07 58.5 203 24.1
C03p30980 Brassica napus HOM05D002981 ORTHO05D003725 7.2e-07 58.5 203 24.1
Eucgr.K03531 Eucalyptus grandis HOM05D002981 ORTHO05D003725 7.2e-07 58.5 216 25.5
HanXRQChr10g0299231 Helianthus annuus HOM05D002981 ORTHO05D003725 7.2e-07 58.5 195 24.6
SHI12762 Sapria himalayana HOM05D002981 ORTHO05D003725 7.2e-07 58.5 125 32.8
HPP92_016960 Vanilla planifolia HOM05D002981 ORTHO05D003725 7.2e-07 58.5 211 24.6
BraA03t11815Z Brassica rapa HOM05D002981 ORTHO05D003725 9.4e-07 58.2 203 23.6
Atru.chr5.1047 Acer truncatum HOM05D002981 ORTHO05D003725 1.2e-06 57.8 211 23.7
BolC3t15449H Brassica oleracea HOM05D002981 ORTHO05D003725 1.2e-06 57.8 121 28.9
Gohir.A08G118600 Gossypium hirsutum HOM05D002981 ORTHO05D003725 1.2e-06 57.8 197 25.4
Gohir.D08G139400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 1.2e-06 57.8 197 25.4
Os05g0156300 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 1.2e-06 57.8 220 25.9
CBR_g19043 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-06 57.4 105 31.4
Duzib138G0226 Durio zibethinus HOM05D002981 ORTHO05D003725 1.6e-06 57.4 170 26.5
ECA234G2827 Erigeron canadensis HOM05D002981 ORTHO05D003725 1.6e-06 57.4 208 24.5
Prupe.6G315000 Prunus persica HOM05D002981 ORTHO05D003725 1.6e-06 57.4 160 26.9
Sp4g29410 Schrenkiella parvula HOM05D002981 ORTHO05D003725 1.6e-06 57.4 207 24.2
C04p00410 Brassica napus HOM05D002981 ORTHO05D003725 2.1e-06 57.0 207 24.2
BolC4t21686H Brassica oleracea HOM05D002981 ORTHO05D003725 2.1e-06 57.0 207 24.2
ECA236G5052 Erigeron canadensis HOM05D002981 ORTHO05D003725 2.1e-06 57.0 118 28.0
Nn3g21634 Nelumbo nucifera HOM05D002981 ORTHO05D003725 2.7e-06 56.6 198 22.7
Hund21746 Selenicereus undatus HOM05D002981 ORTHO05D003725 2.7e-06 56.6 187 25.7
Thecc.01G310600 Theobroma cacao HOM05D002981 ORTHO05D003725 2.7e-06 56.6 195 24.1
TAR362G0641 Trochodendron aralioides HOM05D002981 ORTHO05D003725 2.7e-06 56.6 208 24.0
A03p25980 Brassica napus HOM05D002981 ORTHO05D003725 3.6e-06 56.2 207 23.7
A05p00460 Brassica napus HOM05D002981 ORTHO05D003725 3.6e-06 56.2 207 23.7
Dinv24424 Davidia involucrata HOM05D002981 ORTHO05D003725 3.6e-06 56.2 208 23.1
BcaB02g08769 Brassica carinata HOM05D002981 ORTHO05D003725 4.7e-06 55.8 206 23.3
Cc02_g34820 Coffea canephora HOM05D002981 ORTHO05D003725 4.7e-06 55.8 208 23.6
ECA234G0860 Erigeron canadensis HOM05D002981 ORTHO05D003725 4.7e-06 55.8 70 35.7
Gohir.A07G127500 Gossypium hirsutum HOM05D002981 ORTHO05D003725 4.7e-06 55.8 126 34.1
Nn4g25650 Nelumbo nucifera HOM05D002981 ORTHO05D003725 4.7e-06 55.8 192 22.9
Sc16g0008930 Simmondsia chinensis HOM05D002981 ORTHO05D003725 4.7e-06 55.8 160 25.0
Aa31LG1G28770 Aethionema arabicum HOM05D002981 ORTHO05D003725 6.1e-06 55.5 201 23.9
BraA05t19044Z Brassica rapa HOM05D002981 ORTHO05D003725 6.1e-06 55.5 207 23.7
CSS0028783 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 6.1e-06 55.5 173 24.9
CANSAT54G0071 Cannabis sativa HOM05D002981 ORTHO05D003725 6.1e-06 55.5 205 24.9
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 6.1e-06 55.5 200 26.5
Duzib211G0560 Durio zibethinus HOM05D002981 ORTHO05D003725 6.1e-06 55.5 195 24.1
ECA234G4491 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.1e-06 55.5 139 28.1
Gohir.A12G126400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 6.1e-06 55.5 170 25.9
Sc09g0002680 Simmondsia chinensis HOM05D002981 ORTHO05D003725 6.1e-06 55.5 74 31.1
TWI75G0141 Tripterygium wilfordii HOM05D002981 ORTHO05D003725 6.1e-06 55.5 195 25.6
TAR365G0113 Trochodendron aralioides HOM05D002981 ORTHO05D003725 6.1e-06 55.5 144 24.3
GSVIVG01031219001 Vitis vinifera HOM05D002981 ORTHO05D003725 6.1e-06 55.5 208 22.1
AT2G47470 Arabidopsis thaliana HOM05D002981 ORTHO05D003725 7.9e-06 55.1 210 26.2
Manes.09G175600 Manihot esculenta HOM05D002981 ORTHO05D003725 7.9e-06 55.1 211 25.6
PRCOL_00000310 Prasinoderma coloniale HOM05D000847 ORTHO05D003725 7.9e-06 55.1 119 26.1
SalBow7G4351 Salvia bowleyana HOM05D002981 ORTHO05D003725 7.9e-06 55.1 143 25.9
SGA_v2.0_scaffold80G25880 Striga asiatica HOM05D002981 ORTHO05D003725 7.9e-06 55.1 216 23.6


User provided reference genes

Program Settings