Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 2.4e-245 851.7 407 100.0
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.7e-57 226.5 363 37.7
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 9.9e-50 201.8 400 35.0
Cre02.g097600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 4.4e-34 149.8 399 29.8
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.1e-27 127.1 345 27.5
Pp3c12_8840 Physcomitrium patens HOM05D005825 ORTHO05D006483 2.8e-12 77.4 154 31.2
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 5.8e-10 69.7 133 35.3
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 6.5e-09 66.2 151 33.1
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 8.4e-09 65.9 152 31.6
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 1.4e-08 65.1 153 31.4
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.5e-08 64.3 142 32.4
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 3.2e-08 63.9 166 31.3
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 3.2e-08 63.9 144 31.2
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 5.5e-08 63.2 143 31.5
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 7.1e-08 62.8 151 31.1
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 7.1e-08 62.8 151 32.5
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 7.1e-08 62.8 228 25.9
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 7.1e-08 62.8 145 32.4
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 9.3e-08 62.4 143 32.9
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 9.3e-08 62.4 152 28.3
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 9.3e-08 62.4 151 30.5
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 9.3e-08 62.4 160 30.0
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 1.2e-07 62.0 151 31.1
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 1.2e-07 62.0 143 31.5
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.2e-07 62.0 181 26.5
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.6e-07 61.6 154 29.9
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 2.1e-07 61.2 145 32.4
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.1e-07 61.2 152 30.9
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 2.1e-07 61.2 144 31.9
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 2.1e-07 61.2 150 33.3
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 2.7e-07 60.8 151 29.1
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 2.7e-07 60.8 152 28.3
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 2.7e-07 60.8 152 28.3
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 2.7e-07 60.8 146 32.2
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 4.6e-07 60.1 151 31.1
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 4.6e-07 60.1 142 31.0
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 4.6e-07 60.1 141 31.9
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 4.6e-07 60.1 152 30.3
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 6.1e-07 59.7 150 30.0
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 6.1e-07 59.7 142 31.0
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 7.9e-07 59.3 139 31.7
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 7.9e-07 59.3 142 31.0
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 7.9e-07 59.3 150 27.3
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 7.9e-07 59.3 152 27.6
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 7.9e-07 59.3 142 31.0
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 1.0e-06 58.9 143 29.4
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.0e-06 58.9 139 31.7
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.0e-06 58.9 139 31.7
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.0e-06 58.9 139 31.7
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.3e-06 58.5 150 30.0
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 1.8e-06 58.2 142 30.3
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.8e-06 58.2 142 31.0
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.8e-06 58.2 143 30.1
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 2.3e-06 57.8 149 27.5
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 2.3e-06 57.8 142 28.9
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 2.3e-06 57.8 142 31.0
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 3.0e-06 57.4 153 28.8
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 3.0e-06 57.4 145 27.6
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 3.9e-06 57.0 143 30.1
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 3.9e-06 57.0 150 29.3
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 5.1e-06 56.6 145 29.0
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 5.1e-06 56.6 161 27.3
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 5.1e-06 56.6 160 28.1
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 6.7e-06 56.2 142 28.9
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 8.7e-06 55.8 142 32.4
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 8.7e-06 55.8 143 28.0


User provided reference genes

Program Settings