Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 0.0e+00 1888.2 1068 100.0
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 5.2e-50 204.1 1241 27.2
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 8.6e-45 186.8 1234 26.1
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.1e-43 182.2 1180 25.9
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 3.4e-41 174.9 1194 25.5
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 8.3e-40 170.2 1237 25.1
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 6.6e-37 160.6 1210 24.9
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 8.6e-37 160.2 1208 24.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 2.4e-34 152.1 1200 23.5
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.6e-33 147.1 1174 24.3
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 4.9e-32 144.4 1227 24.4
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 4.9e-32 144.4 658 26.9
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 8.4e-32 143.7 1215 24.6
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.9e-31 142.5 1212 23.7
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 4.2e-31 141.4 1176 24.0
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 5.4e-31 141.0 1183 23.4
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 5.4e-31 141.0 658 26.3
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 2.7e-30 138.7 663 26.5
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 3.5e-30 138.3 1177 23.9
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 1.0e-29 136.7 1211 23.9
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 1.3e-29 136.3 1201 23.5
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.3e-29 136.3 1124 24.3
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 3.9e-29 134.8 1215 23.8
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 8.7e-29 133.7 1216 23.8
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 7.3e-28 130.6 1205 23.4
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 7.3e-28 130.6 1213 23.2
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 7.3e-28 130.6 1211 23.3
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 9.6e-28 130.2 1220 23.8
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 9.6e-28 130.2 1216 23.4
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 2.1e-27 129.0 1169 23.4
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 2.8e-27 128.6 1216 23.5
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 6.2e-27 127.5 655 25.5
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.4e-26 126.3 1218 23.5
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.8e-26 125.9 1207 23.4
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 2.4e-26 125.6 1202 22.7
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 2.4e-26 125.6 1217 23.3
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 2.4e-26 125.6 1201 24.0
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.0e-26 124.8 1207 23.4
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 5.3e-26 124.4 1201 23.3
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 6.9e-26 124.0 1212 23.2
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 9.0e-26 123.6 1200 23.2
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 1.2e-25 123.2 1186 22.8
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.2e-25 123.2 1151 22.8
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.2e-25 123.2 1222 22.9
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 2.6e-25 122.1 1218 23.3
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 2.6e-25 122.1 657 26.8
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 3.4e-25 121.7 1246 22.7
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 3.4e-25 121.7 1201 22.9
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 7.6e-25 120.6 633 26.5
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 9.9e-25 120.2 1218 23.1
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 9.9e-25 120.2 1218 23.1
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 3.8e-24 118.2 1207 22.8
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 3.8e-24 118.2 1140 23.2
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.9e-23 115.9 1213 22.3
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 2.4e-23 115.5 1215 22.8
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 3.2e-23 115.2 656 25.6
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 7.1e-23 114.0 1171 22.6
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 7.1e-23 114.0 1218 22.8
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 7.1e-23 114.0 1232 23.0
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 1.2e-22 113.2 673 25.0
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.1e-22 112.5 1234 23.1
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 7.8e-22 110.5 1199 22.6
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.0e-21 110.2 1216 22.9
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.0e-21 110.2 1031 23.6
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 1.3e-21 109.8 1102 23.0
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 2.3e-21 109.0 1201 22.6
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 3.9e-21 108.2 1202 22.5
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 5.1e-21 107.8 1203 22.4
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 8.7e-21 107.1 1063 21.5
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 8.7e-21 107.1 277 30.0
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.1e-20 106.7 665 24.4
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 1.1e-20 106.7 1212 23.0
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.5e-20 106.3 649 25.1
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 3.3e-20 105.1 648 25.6
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 7.3e-20 104.0 1198 23.4
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.3e-19 103.2 1200 22.9
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.6e-19 102.8 1210 21.2
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.6e-19 102.8 1212 22.2
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 1.6e-19 102.8 462 27.5
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 4.8e-19 101.3 1200 22.5
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 4.8e-19 101.3 391 27.4
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 6.2e-19 100.9 1219 22.4
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 6.2e-19 100.9 455 27.3
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.1e-18 100.1 1194 22.6
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.1e-18 100.1 588 25.2
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 1.4e-18 99.8 1207 22.2
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.4e-18 99.8 1180 22.2
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 4.0e-18 98.2 282 30.5
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 4.0e-18 98.2 1192 22.1
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.2e-17 96.7 1208 21.2
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.5e-17 96.3 651 25.2
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.5e-17 96.3 1164 22.1
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 2.0e-17 95.9 657 25.0
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 2.6e-17 95.5 458 27.3
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 5.8e-17 94.4 1223 22.2
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 7.6e-17 94.0 283 27.9
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 9.9e-17 93.6 680 23.7
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.1e-15 90.1 646 25.5
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.1e-15 90.1 646 25.5
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.9e-15 89.4 1215 23.0
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 4.2e-15 88.2 282 28.7
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.6e-14 86.3 1169 21.8
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.0e-13 83.6 357 25.8
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 3.9e-13 81.6 336 27.7
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 3.9e-13 81.6 1421 24.5
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.7e-13 80.5 1218 22.2
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 4.3e-12 78.2 256 28.5
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 5.6e-12 77.8 1301 21.1
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.6e-11 76.3 493 25.8
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 1.1e-10 73.6 170 30.6
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.4e-10 73.2 226 28.3
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.7e-08 66.2 399 26.3
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.1e-07 63.5 662 23.7
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 2.7e-06 58.9 651 22.1
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 3.5e-06 58.5 428 24.3


User provided reference genes

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