Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 9.6e-234 813.1 419 100.0
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 3.5e-50 203.4 404 36.9
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.7e-49 201.1 343 37.9
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 3.9e-49 199.9 472 33.9
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 5.0e-49 199.5 345 37.1
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 8.6e-49 198.7 345 37.4
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 1.1e-48 198.4 354 36.4
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.1e-48 198.4 346 37.9
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.5e-48 198.0 381 35.7
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.5e-48 198.0 343 37.9
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.9e-48 197.6 347 36.9
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 2.5e-48 197.2 403 35.0
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 3.3e-48 196.8 355 36.6
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.3e-48 196.8 345 37.4
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 7.3e-48 195.7 358 36.3
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 9.5e-48 195.3 347 36.3
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.6e-47 194.5 347 36.6
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 2.1e-47 194.1 349 37.2
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 2.1e-47 194.1 345 36.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.8e-47 193.7 363 36.1
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 2.8e-47 193.7 345 35.7
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 3.6e-47 193.4 345 37.7
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 3.6e-47 193.4 345 36.5
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 4.7e-47 193.0 345 36.5
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.7e-47 193.0 345 36.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 4.7e-47 193.0 345 36.8
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 6.2e-47 192.6 345 36.5
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 6.2e-47 192.6 344 36.6
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 8.0e-47 192.2 345 37.1
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.1e-46 191.8 345 37.1
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.4e-46 191.4 379 35.1
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.4e-46 191.4 345 37.1
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.4e-46 191.4 345 36.2
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.3e-46 190.7 345 35.4
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.3e-46 190.7 345 35.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.3e-46 190.7 345 36.2
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 3.1e-46 190.3 346 36.7
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 4.0e-46 189.9 345 37.1
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 4.0e-46 189.9 345 36.8
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 4.0e-46 189.9 345 36.2
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 5.2e-46 189.5 345 36.5
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.8e-46 189.1 346 36.1
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 6.8e-46 189.1 350 39.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 6.8e-46 189.1 403 34.7
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 8.9e-46 188.7 345 36.2
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 8.9e-46 188.7 378 35.2
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.2e-45 188.3 346 36.4
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 1.2e-45 188.3 345 36.2
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.5e-45 188.0 343 35.9
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 1.5e-45 188.0 354 35.6
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 3.4e-45 186.8 345 36.2
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 5.8e-45 186.0 345 36.2
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 5.8e-45 186.0 345 35.9
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 5.8e-45 186.0 345 35.9
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 5.8e-45 186.0 299 39.1
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 5.8e-45 186.0 345 36.5
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 9.8e-45 185.3 345 35.7
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.7e-44 184.5 345 35.1
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 1.7e-44 184.5 345 35.7
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 1.7e-44 184.5 380 34.5
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 2.9e-44 183.7 345 35.9
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 4.9e-44 183.0 345 34.5
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 4.9e-44 183.0 345 35.4
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 6.4e-44 182.6 343 34.4
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 6.4e-44 182.6 343 35.0
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 8.3e-44 182.2 343 34.4
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 8.3e-44 182.2 343 34.4
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 1.1e-43 181.8 343 34.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.1e-43 181.8 343 34.4
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 1.1e-43 181.8 344 35.2
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.1e-43 181.8 343 35.3
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 1.1e-43 181.8 343 34.1
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.4e-43 181.4 343 35.0
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.4e-43 181.4 345 34.8
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.4e-43 181.4 343 34.4
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.4e-43 181.4 354 35.3
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.9e-43 181.0 344 34.3
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 3.2e-43 180.3 343 34.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 3.2e-43 180.3 345 34.5
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 9.2e-43 178.7 343 34.4
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 9.2e-43 178.7 347 34.9
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 9.2e-43 178.7 343 34.7
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.6e-42 177.9 345 35.1
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.5e-42 176.8 347 34.3
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 4.6e-42 176.4 346 34.7
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.3e-41 174.9 353 35.1
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.3e-41 174.9 345 34.2
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.3e-41 174.9 351 34.8
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 5.0e-41 172.9 277 39.4
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 5.0e-41 172.9 361 36.6
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.1e-40 171.8 369 34.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 6.2e-39 166.0 265 39.2
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.8e-37 159.5 345 34.2
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.7e-34 150.6 367 32.4
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 4.3e-32 143.3 245 38.8
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.3e-32 143.3 345 33.0
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.7e-31 139.8 210 41.0
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 6.2e-31 139.4 256 38.3
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.1e-30 138.7 209 38.8
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 9.2e-27 125.6 389 29.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 2.7e-26 124.0 345 33.3
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.3e-25 120.9 175 37.1
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 5.6e-24 116.3 223 37.7
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 4.0e-22 110.2 378 29.1
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 8.4e-20 102.4 147 38.8
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.9e-19 101.3 345 28.1
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 5.4e-19 99.8 159 40.3
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 7.1e-19 99.4 159 41.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.5e-18 97.1 88 46.6
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 6.0e-18 96.3 207 33.8
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 3.9e-17 93.6 346 26.9
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.5e-13 81.6 72 51.4
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.5e-13 81.6 78 48.7


User provided reference genes

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