Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 0.0e+00 1208.7 653 100.0
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.1e-10 72.8 238 26.9
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 7.2e-10 70.1 188 27.7
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 2.7e-09 68.2 183 28.4
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 3.6e-09 67.8 265 26.4
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 3.6e-09 67.8 160 30.0
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 4.7e-09 67.4 217 27.6
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 7.9e-09 66.6 175 26.9
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 7.9e-09 66.6 175 28.6
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.4e-08 65.9 213 27.2
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.8e-08 65.5 176 29.0
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 1.8e-08 65.5 180 27.8
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 1.8e-08 65.5 175 28.0
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 3.0e-08 64.7 183 27.9
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 3.9e-08 64.3 159 27.7
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 3.9e-08 64.3 187 26.2
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 5.1e-08 63.9 222 26.1
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 6.7e-08 63.5 213 26.8
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 6.7e-08 63.5 183 26.8
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 6.7e-08 63.5 183 26.8
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 8.8e-08 63.2 235 25.1
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 1.1e-07 62.8 184 25.5
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 1.1e-07 62.8 177 26.6
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 1.5e-07 62.4 170 27.6
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.5e-07 62.4 159 26.4
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 1.5e-07 62.4 160 28.8
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 1.5e-07 62.4 175 26.9
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.0e-07 62.0 182 26.9
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 2.0e-07 62.0 242 24.8
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 2.6e-07 61.6 182 24.7
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 2.6e-07 61.6 242 24.8
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 2.6e-07 61.6 170 25.9
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 3.3e-07 61.2 309 24.9
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 3.3e-07 61.2 187 26.7
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 4.4e-07 60.8 182 29.7
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 4.4e-07 60.8 240 25.4
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 5.7e-07 60.5 161 29.8
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 5.7e-07 60.5 234 25.2
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 7.4e-07 60.1 190 28.4
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.4e-07 60.1 187 27.8
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 7.4e-07 60.1 170 25.9
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 9.7e-07 59.7 175 26.3
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 1.3e-06 59.3 224 25.4
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 1.3e-06 59.3 224 25.4
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.3e-06 59.3 159 25.8
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.7e-06 58.9 162 25.9
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.7e-06 58.9 218 26.1
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.7e-06 58.9 241 24.5
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 1.7e-06 58.9 160 28.1
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 2.2e-06 58.5 229 27.1
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 2.8e-06 58.2 181 25.4
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 2.8e-06 58.2 183 25.1
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 2.8e-06 58.2 150 27.3
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.8e-06 58.2 176 25.0
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 2.8e-06 58.2 186 26.9
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 3.7e-06 57.8 184 25.0
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.7e-06 57.8 187 27.3
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 4.8e-06 57.4 184 25.0
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 4.8e-06 57.4 159 25.8
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 4.8e-06 57.4 159 25.8
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.8e-06 57.4 235 24.7
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 8.2e-06 56.6 183 26.2


User provided reference genes

Program Settings