Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 9.6e-150 533.5 272 100.0
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.4e-70 268.9 231 61.5
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 1.1e-41 174.5 244 44.3
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 2.1e-40 170.2 230 44.8
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 4.7e-40 169.1 247 40.9
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 6.2e-40 168.7 231 42.0
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 2.0e-38 163.7 246 41.9
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 5.8e-38 162.2 245 40.8
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 3.8e-37 159.5 231 39.4
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 8.4e-37 158.3 231 39.4
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 1.4e-36 157.5 231 38.5
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.9e-36 157.1 246 37.8
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 2.4e-36 156.8 241 38.2
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 2.4e-36 156.8 248 38.7
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 3.2e-36 156.4 232 39.2
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 3.2e-36 156.4 246 37.8
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 3.2e-36 156.4 235 38.3
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 4.1e-36 156.0 233 39.9
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 4.1e-36 156.0 236 37.3
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 4.1e-36 156.0 244 40.2
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 4.1e-36 156.0 249 36.9
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 4.1e-36 156.0 248 37.9
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 5.4e-36 155.6 245 39.6
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 9.2e-36 154.8 239 39.3
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 9.2e-36 154.8 246 39.0
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-35 154.5 248 39.9
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 1.2e-35 154.5 246 37.8
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 1.2e-35 154.5 246 37.8
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.2e-35 154.5 241 37.3
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.6e-35 154.1 245 38.8
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 2.1e-35 153.7 245 38.0
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.1e-35 153.7 248 37.5
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 2.7e-35 153.3 231 38.5
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.7e-35 153.3 245 38.8
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 3.5e-35 152.9 244 37.3
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 3.5e-35 152.9 234 37.6
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 4.6e-35 152.5 232 38.8
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 4.6e-35 152.5 250 36.4
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 4.6e-35 152.5 250 36.4
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 6.0e-35 152.1 249 37.3
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 6.0e-35 152.1 247 36.8
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.0e-34 151.4 246 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 1.3e-34 151.0 239 40.2
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.3e-34 151.0 245 37.6
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.3e-34 151.0 245 36.3
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.3e-34 151.0 245 36.7
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 1.7e-34 150.6 232 37.9
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 1.7e-34 150.6 248 37.9
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 3.0e-34 149.8 234 36.8
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 3.0e-34 149.8 250 36.4
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 3.0e-34 149.8 248 37.9
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 3.0e-34 149.8 248 38.3
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 3.9e-34 149.4 245 37.1
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.9e-34 149.4 246 39.0
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 5.1e-34 149.1 233 38.2
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 5.1e-34 149.1 246 37.4
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 6.6e-34 148.7 248 39.1
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 6.6e-34 148.7 248 39.1
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 6.6e-34 148.7 222 41.0
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 6.6e-34 148.7 232 37.1
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 8.6e-34 148.3 248 36.7
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 8.6e-34 148.3 249 37.8
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 8.6e-34 148.3 248 37.1
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 1.1e-33 147.9 248 37.5
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 1.1e-33 147.9 228 37.7
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.5e-33 147.5 247 36.4
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.5e-33 147.5 246 36.2
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.5e-33 147.5 246 36.6
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 3.3e-33 146.4 231 38.1
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 3.3e-33 146.4 248 36.3
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.3e-33 146.0 267 37.5
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 4.3e-33 146.0 252 36.9
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 5.6e-33 145.6 242 35.5
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 5.6e-33 145.6 245 37.1
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 5.6e-33 145.6 246 37.0
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 5.6e-33 145.6 246 37.8
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 7.3e-33 145.2 252 36.1
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 9.6e-33 144.8 250 37.2
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 1.2e-32 144.4 244 38.1
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.6e-32 144.1 254 35.8
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.6e-32 144.1 281 33.5
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 1.6e-32 144.1 243 36.6
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 2.8e-32 143.3 248 36.7
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 4.7e-32 142.5 242 37.2
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 6.2e-32 142.1 249 36.5
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 1.1e-31 141.4 251 37.5
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 1.1e-31 141.4 244 35.2
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 1.8e-31 140.6 247 34.8
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.8e-31 140.6 246 36.2
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 5.2e-31 139.0 247 36.4
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 5.2e-31 139.0 209 42.1
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 8.9e-31 138.3 248 34.7
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.4e-30 136.3 184 44.0
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.7e-29 134.0 198 39.9
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 4.9e-29 132.5 208 38.5
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 6.4e-29 132.1 220 37.3
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 2.4e-28 130.2 282 32.3
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 9.3e-28 128.3 211 37.4
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-27 127.1 213 38.0
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.5e-27 126.3 211 37.4
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 7.8e-27 125.2 236 34.7
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-26 124.4 213 38.0
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 5.6e-25 119.0 183 41.5
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.4e-23 114.4 193 36.8
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.4e-22 109.8 245 31.4
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 9.9e-22 108.2 218 35.8
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 1.7e-21 107.5 249 29.7
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 2.1e-19 100.5 167 35.9
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.7e-19 100.1 162 37.0
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 8.7e-18 95.1 148 38.5
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.4e-15 87.8 198 37.9
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.5e-14 84.3 131 39.7
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 2.2e-13 80.5 146 35.6
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 2.9e-13 80.1 145 37.9
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 4.9e-13 79.3 109 41.3
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 8.4e-13 78.6 144 37.5
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.6e-11 74.3 103 36.9
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 4.6e-11 72.8 145 36.6
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 7.9e-11 72.0 139 36.7
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-10 71.2 83 47.0
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.0e-10 70.1 167 32.3
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 5.1e-10 69.3 137 35.8
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-09 68.2 137 34.3
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 4.8e-08 62.8 166 30.7


User provided reference genes

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