Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002247 Prasinoderma coloniale HOM05D002632 ORTHO05D002881 6.9e-147 524.2 325 100.0
DCAR_005286 Daucus carota HOM05D002632 ORTHO05D002881 1.8e-25 120.9 215 37.2
Sed0003247 Sechium edule HOM05D002632 ORTHO05D002881 6.3e-23 112.5 227 38.3
Nitab4.5_0001574g0120 Nicotiana tabacum HOM05D002632 ORTHO05D002881 1.1e-22 111.7 220 38.6
PGR142G2893 Punica granatum HOM05D002632 ORTHO05D002881 1.1e-22 111.7 249 34.1
AUR62020873 Chenopodium quinoa HOM05D002632 ORTHO05D002881 1.8e-22 110.9 218 36.2
CAN.G767.18 Capsicum annuum HOM05D002632 ORTHO05D002881 6.9e-22 109.0 221 38.0
AT4G14000 Arabidopsis thaliana HOM05D002632 ORTHO05D002881 9.1e-22 108.6 218 38.5
EL10Ac3g07443 Beta vulgaris HOM05D002632 ORTHO05D002881 9.1e-22 108.6 218 36.7
CsaV3_3G015730 Cucumis sativus L. HOM05D002632 ORTHO05D002881 9.1e-22 108.6 223 37.7
CARHR219970 Cardamine hirsuta HOM05D002632 ORTHO05D002881 1.2e-21 108.2 219 40.2
Lju912C2G13 Lonicera japonica HOM05D002632 ORTHO05D002881 1.2e-21 108.2 221 36.7
Sp7g11800 Schrenkiella parvula HOM05D002632 ORTHO05D002881 1.2e-21 108.2 218 39.4
C04p41810 Brassica napus HOM05D002632 ORTHO05D002881 2.0e-21 107.5 217 41.0
ClCG05G007030 Citrullus lanatus HOM05D002632 ORTHO05D002881 2.0e-21 107.5 223 37.2
Peaxi162Scf00652g00017 Petunia axillaris HOM05D002632 ORTHO05D002881 2.0e-21 107.5 221 37.1
Solyc12g098530.2 Solanum lycopersicum HOM05D002632 ORTHO05D002881 2.0e-21 107.5 221 38.0
Hma1.2p1_0349F.1_g132020 Hydrangea macrophylla HOM05D002632 ORTHO05D002881 2.6e-21 107.1 228 35.1
PGSC0003DMG400004663 Solanum tuberosum HOM05D002632 ORTHO05D002881 2.6e-21 107.1 224 37.5
AL7G42440 Arabidopsis lyrata HOM05D002632 ORTHO05D002881 3.4e-21 106.7 218 39.4
BcaC02g09371 Brassica carinata HOM05D002632 ORTHO05D002881 3.4e-21 106.7 217 40.1
Sopen12g033310 Solanum pennellii HOM05D002632 ORTHO05D002881 3.4e-21 106.7 221 37.6
A04p08130 Brassica napus HOM05D002632 ORTHO05D002881 4.5e-21 106.3 216 38.9
BolC4t25762H Brassica oleracea HOM05D002632 ORTHO05D002881 4.5e-21 106.3 217 40.1
BraA04t16502Z Brassica rapa HOM05D002632 ORTHO05D002881 4.5e-21 106.3 216 38.9
MELO3C006772.2 Cucumis melo HOM05D002632 ORTHO05D002881 4.5e-21 106.3 224 38.4
Nitab4.5_0003263g0020 Nicotiana tabacum HOM05D002632 ORTHO05D002881 5.9e-21 105.9 221 36.2
RcHm_v2.0_Chr4g0413351 Rosa chinensis HOM05D002632 ORTHO05D002881 5.9e-21 105.9 226 35.0
Thhalv10025872m.g Eutrema salsugineum HOM05D002632 ORTHO05D002881 7.7e-21 105.5 279 34.8
Carub.0007s2843 Capsella rubella HOM05D002632 ORTHO05D002881 1.0e-20 105.1 218 39.0
AUR62018546 Chenopodium quinoa HOM05D002632 ORTHO05D002881 1.0e-20 105.1 218 33.9
PSO210G3035 Papaver somniferum HOM05D002632 ORTHO05D002881 1.0e-20 105.1 219 36.1
Ca_04111_v3 Cicer arietinum L. HOM05D002632 ORTHO05D002881 2.2e-20 104.0 219 37.0
Eucgr.H00019 Eucalyptus grandis HOM05D002632 ORTHO05D002881 2.2e-20 104.0 221 34.8
FvH4_4g13200 Fragaria vesca HOM05D002632 ORTHO05D002881 2.2e-20 104.0 226 35.0
Potri.001G321100 Populus trichocarpa HOM05D002632 ORTHO05D002881 2.2e-20 104.0 228 34.2
Sabra16G0203600 Salix brachista HOM05D002632 ORTHO05D002881 2.2e-20 104.0 228 34.6
MCO12G492 Micromonas commoda HOM05D002632 ORTHO05D002881 2.9e-20 103.6 216 38.0
SGA_v2.0_scaffold4G02140 Striga asiatica HOM05D002632 ORTHO05D002881 2.9e-20 103.6 239 33.9
TAR365G0766 Trochodendron aralioides HOM05D002632 ORTHO05D002881 2.9e-20 103.6 225 32.4
TPR.G4308 Trifolium pratense HOM05D002632 ORTHO05D002881 3.8e-20 103.2 219 35.6
Ah.13g077900 Amaranthus hybridus HOM05D002632 ORTHO05D002881 5.0e-20 102.8 218 34.4
HanXRQChr15g0485811 Helianthus annuus HOM05D002632 ORTHO05D002881 5.0e-20 102.8 213 35.2
Sc13g0000450 Simmondsia chinensis HOM05D002632 ORTHO05D002881 5.0e-20 102.8 261 33.7
FAN07G0477 Fragaria x ananassa HOM05D002632 ORTHO05D002881 6.5e-20 102.4 226 34.1
Nn7g37634 Nelumbo nucifera HOM05D002632 ORTHO05D002881 6.5e-20 102.4 236 32.2
PSO761G0190 Papaver somniferum HOM05D002632 ORTHO05D002881 8.5e-20 102.1 219 34.7
QL06p026917 Quercus lobata HOM05D002632 ORTHO05D002881 8.5e-20 102.1 225 35.1
Thecc.04G193800 Theobroma cacao HOM05D002632 ORTHO05D002881 8.5e-20 102.1 219 36.1
BcaB02g08641 Brassica carinata HOM05D002632 ORTHO05D002881 1.1e-19 101.7 212 41.0
Cc00_g21630 Coffea canephora HOM05D002632 ORTHO05D002881 1.1e-19 101.7 248 34.3
FAN12G3214 Fragaria x ananassa HOM05D002632 ORTHO05D002881 1.1e-19 101.7 237 33.8
COL.COLO4_05440 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.4e-19 101.3 215 37.2
CSS0041499 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 3.2e-19 100.1 226 34.5
Os09g0359900 Oryza sativa ssp. japonica HOM05D002632 ORTHO05D002881 3.2e-19 100.1 222 35.6
CSS0040167 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 4.2e-19 99.8 226 34.1
CANSAT78G1535 Cannabis sativa HOM05D002632 ORTHO05D002881 4.2e-19 99.8 227 34.8
Lalb_Chr08g0230491 Lupinus albus HOM05D002632 ORTHO05D002881 7.2e-19 99.0 290 32.4
Aqoxy2G02390 Aquilegia oxysepala HOM05D002632 ORTHO05D002881 1.2e-18 98.2 230 33.5
Haze_11663 Corylus avellana HOM05D002632 ORTHO05D002881 1.2e-18 98.2 225 34.2
Lj6g0021538 Lotus japonicus HOM05D002632 ORTHO05D002881 1.2e-18 98.2 221 36.7
CDE04G1900 Ceratophyllum demersum HOM05D002632 ORTHO05D002881 1.6e-18 97.8 243 31.7
Glyma.18G002700 Glycine max HOM05D002632 ORTHO05D002881 1.6e-18 97.8 277 32.9
MD04G1018000 Malus domestica HOM05D002632 ORTHO05D002881 1.6e-18 97.8 228 34.6
ECA238G4635 Erigeron canadensis HOM05D002632 ORTHO05D002881 2.1e-18 97.4 219 34.7
Psat3g194800 Pisum sativum HOM05D002632 ORTHO05D002881 2.1e-18 97.4 218 35.8
CSS0027550 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 2.7e-18 97.1 226 34.1
Ciclev10005461m.g Citrus clementina HOM05D002632 ORTHO05D002881 4.7e-18 96.3 235 32.8
Hund24429 Selenicereus undatus HOM05D002632 ORTHO05D002881 4.7e-18 96.3 218 33.9
Dinv27193 Davidia involucrata HOM05D002632 ORTHO05D002881 6.1e-18 95.9 227 33.5
Rhsim04G0026300 Rhododendron simsii HOM05D002632 ORTHO05D002881 6.1e-18 95.9 227 33.9
SMO275G0063 Selaginella moellendorffii HOM05D002632 ORTHO05D002881 6.1e-18 95.9 225 34.2
CSS0027222 Camellia sinensis var. sinensis HOM05D002632 ORTHO05D002881 1.0e-17 95.1 222 34.2
CiPaw.02G064000 Carya illinoinensis HOM05D002632 ORTHO05D002881 1.0e-17 95.1 225 32.9
Duzib268G1539 Durio zibethinus HOM05D002632 ORTHO05D002881 1.4e-17 94.7 215 36.3
Medtr7g008030 Medicago truncatula HOM05D002632 ORTHO05D002881 1.4e-17 94.7 245 33.5
Phvul.001G266000 Phaseolus vulgaris HOM05D002632 ORTHO05D002881 1.8e-17 94.4 222 35.6
Gorai.011G152100 Gossypium raimondii HOM05D002632 ORTHO05D002881 2.3e-17 94.0 220 35.5
Gohir.A10G129200 Gossypium hirsutum HOM05D002632 ORTHO05D002881 3.0e-17 93.6 225 34.7
Gohir.D10G137000 Gossypium hirsutum HOM05D002632 ORTHO05D002881 3.0e-17 93.6 225 34.7
Manes.05G201800 Manihot esculenta HOM05D002632 ORTHO05D002881 3.9e-17 93.2 229 34.1
Prupe.1G166800 Prunus persica HOM05D002632 ORTHO05D002881 5.2e-17 92.8 225 34.2
VMungo1383G3241 Vigna mungo HOM05D002632 ORTHO05D002881 5.2e-17 92.8 221 35.3
Aa31LG8G10370 Aethionema arabicum HOM05D002632 ORTHO05D002881 6.7e-17 92.4 221 35.7
CiPaw.02G063400 Carya illinoinensis HOM05D002632 ORTHO05D002881 6.7e-17 92.4 225 32.4
Migut.N00425 Erythranthe guttata HOM05D002632 ORTHO05D002881 6.7e-17 92.4 221 33.9
HPP92_022938 Vanilla planifolia HOM05D002632 ORTHO05D002881 8.8e-17 92.0 228 32.9
HPP92_022948 Vanilla planifolia HOM05D002632 ORTHO05D002881 8.8e-17 92.0 228 32.9
Cre08.g378250 Chlamydomonas reinhardtii HOM05D002632 ORTHO05D002881 1.1e-16 91.7 220 35.5
Zm00001eb098490 Zea mays HOM05D002632 ORTHO05D002881 1.1e-16 91.7 222 32.4
MBI18_g03882_MAGBIO Magnolia biondii HOM05D002632 ORTHO05D002881 1.5e-16 91.3 234 32.5
THA.LOC104804794 Tarenaya hassleriana HOM05D002632 ORTHO05D002881 2.0e-16 90.9 223 34.5
MSTRG.24611 Avicennia marina HOM05D002632 ORTHO05D002881 4.4e-16 89.7 226 33.2
Lsat_1_v5_gn_2_47660 Lactuca sativa HOM05D002632 ORTHO05D002881 7.4e-16 89.0 228 34.2
SalBow3G2534 Salvia bowleyana HOM05D002632 ORTHO05D002881 7.4e-16 89.0 219 34.2
FAN17G2987 Fragaria x ananassa HOM05D002632 ORTHO05D002881 9.7e-16 88.6 202 33.2
Atru.chr4.1554 Acer truncatum HOM05D002632 ORTHO05D002881 1.3e-15 88.2 203 34.5
ATR0693G355 Amborella trichopoda HOM05D002632 ORTHO05D002881 1.3e-15 88.2 232 34.1
RcHm_v2.0_Chr1g0331221 Rosa chinensis HOM05D002632 ORTHO05D002881 1.3e-15 88.2 179 35.8
arahy.Tifrunner.gnm1.ann1.MV33TH Arachis hypogaea HOM05D002632 ORTHO05D002881 2.2e-15 87.4 219 34.2
arahy.Tifrunner.gnm1.ann1.82GX91 Arachis hypogaea HOM05D002632 ORTHO05D002881 1.4e-14 84.7 219 33.8
SMO367G1084 Selaginella moellendorffii HOM05D002632 ORTHO05D002881 5.3e-14 82.8 270 30.4
SMO361G0483 Selaginella moellendorffii HOM05D002632 ORTHO05D002881 3.5e-13 80.1 191 32.5
unitig_744.g24026 Utricularia gibba HOM05D002632 ORTHO05D002881 4.5e-13 79.7 267 32.2
Actinidia35834 Actinidia chinensis HOM05D002632 ORTHO05D002881 5.9e-13 79.3 216 30.6
Cpa.g.sc157.41 Carica papaya HOM05D002632 ORTHO05D002881 1.0e-12 78.6 159 35.2
Pp3c20_16690 Physcomitrium patens HOM05D002632 ORTHO05D002881 5.0e-12 76.3 307 26.4
Mapoly0002s0255 Marchantia polymorpha HOM05D002632 ORTHO05D002881 5.5e-11 72.8 282 29.1
AagrBONN_evm.TU.Sc2ySwM_228.111 Anthoceros agrestis HOM05D002632 ORTHO05D002881 2.1e-10 70.9 328 27.7
SEGI_03108 Sequoiadendron giganteum HOM05D002632 ORTHO05D002881 5.2e-09 66.2 284 28.2
Cfa023167 Carpinus fangiana HOM05D002632 ORTHO05D002881 2.0e-08 64.3 223 31.8
CiPaw.02G064200 Carya illinoinensis HOM05D002632 ORTHO05D002881 2.4e-06 57.4 207 28.5
CiPaw.02G063600 Carya illinoinensis HOM05D002632 ORTHO05D002881 3.1e-06 57.0 225 29.3
Pp3c8_15830 Physcomitrium patens HOM05D002632 ORTHO05D002881 3.1e-06 57.0 84 40.5


User provided reference genes

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