Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002240 Prasinoderma coloniale HOM05D004069 ORTHO05D004699 2.6e-55 218.4 103 100.0
Zm00001eb396890 Zea mays HOM05D004069 ORTHO05D004699 6.6e-19 97.4 90 47.8
PGR004G0388 Punica granatum HOM05D004069 ORTHO05D004699 1.1e-18 96.7 92 45.7
Hund07638 Selenicereus undatus HOM05D004069 ORTHO05D004699 2.5e-18 95.5 96 45.8
VMungo0331G0995 Vigna mungo HOM05D004069 ORTHO05D004699 2.1e-17 92.4 89 44.9
Pp3c3_33480 Physcomitrium patens HOM05D004069 ORTHO05D004699 2.8e-17 92.0 90 44.4
Pp3c4_6220 Physcomitrium patens HOM05D004069 ORTHO05D004699 2.8e-17 92.0 90 44.4
CsaV3_1G037430 Cucumis sativus L. HOM05D004069 ORTHO05D004699 3.6e-17 91.7 92 42.4
Eucgr.H03663 Eucalyptus grandis HOM05D004069 ORTHO05D004699 3.6e-17 91.7 92 44.6
CANSAT54G0205 Cannabis sativa HOM05D004069 ORTHO05D004699 4.8e-17 91.3 92 42.4
Os03g0295500 Oryza sativa ssp. japonica HOM05D004069 ORTHO05D004699 6.2e-17 90.9 90 46.7
Pp3c10_17050 Physcomitrium patens HOM05D004069 ORTHO05D004699 6.2e-17 90.9 90 45.6
Sed0000717 Sechium edule HOM05D004069 ORTHO05D004699 6.2e-17 90.9 92 43.5
Eucgr.B01248 Eucalyptus grandis HOM05D004069 ORTHO05D004699 8.1e-17 90.5 90 45.6
Thecc.04G274500 Theobroma cacao HOM05D004069 ORTHO05D004699 8.1e-17 90.5 90 45.6
HPP92_001127 Vanilla planifolia HOM05D004069 ORTHO05D004699 8.1e-17 90.5 90 42.2
VMungo0331G0279 Vigna mungo HOM05D004069 ORTHO05D004699 8.1e-17 90.5 89 43.8
Gohir.A09G232800 Gossypium hirsutum HOM05D004069 ORTHO05D004699 1.1e-16 90.1 92 43.5
PSO210G4490 Papaver somniferum HOM05D004069 ORTHO05D004699 1.1e-16 90.1 90 45.6
PSO832G3814 Papaver somniferum HOM05D004069 ORTHO05D004699 1.1e-16 90.1 90 45.6
Phvul.010G048500 Phaseolus vulgaris HOM05D004069 ORTHO05D004699 1.1e-16 90.1 89 43.8
RcHm_v2.0_Chr4g0420511 Rosa chinensis HOM05D004069 ORTHO05D004699 1.1e-16 90.1 92 42.4
Sc19g0004820 Simmondsia chinensis HOM05D004069 ORTHO05D004699 1.1e-16 90.1 98 42.9
Duzib151G0641 Durio zibethinus HOM05D004069 ORTHO05D004699 1.4e-16 89.7 92 44.6
Gohir.D09G233900 Gossypium hirsutum HOM05D004069 ORTHO05D004699 1.4e-16 89.7 92 43.5
CAN.G981.42 Capsicum annuum HOM05D004069 ORTHO05D004699 1.8e-16 89.4 90 43.3
Eucgr.B01240 Eucalyptus grandis HOM05D004069 ORTHO05D004699 1.8e-16 89.4 90 45.6
Gohir.D10G164800 Gossypium hirsutum HOM05D004069 ORTHO05D004699 1.8e-16 89.4 92 44.6
Gorai.011G184000 Gossypium raimondii HOM05D004069 ORTHO05D004699 1.8e-16 89.4 92 44.6
CiPaw.01G155300 Carya illinoinensis HOM05D004069 ORTHO05D004699 2.4e-16 89.0 92 42.4
Gorai.006G256800 Gossypium raimondii HOM05D004069 ORTHO05D004699 2.4e-16 89.0 92 42.4
EL10Ac9g21174 Beta vulgaris HOM05D004069 ORTHO05D004699 3.1e-16 88.6 92 41.3
Cpa.g.sc16.88 Carica papaya HOM05D004069 ORTHO05D004699 3.1e-16 88.6 92 42.4
FvH4_4g16930 Fragaria vesca HOM05D004069 ORTHO05D004699 3.1e-16 88.6 92 42.4
FAN12G1790 Fragaria x ananassa HOM05D004069 ORTHO05D004699 3.1e-16 88.6 92 42.4
FAN12G4073 Fragaria x ananassa HOM05D004069 ORTHO05D004699 3.1e-16 88.6 92 42.4
MD05G1041600 Malus domestica HOM05D004069 ORTHO05D004699 3.1e-16 88.6 90 43.3
Mapoly0119s0025 Marchantia polymorpha HOM05D004069 ORTHO05D004699 3.1e-16 88.6 90 44.4
Nn4g26079 Nelumbo nucifera HOM05D004069 ORTHO05D004699 3.1e-16 88.6 90 42.2
Solyc08g080240.3 Solanum lycopersicum HOM05D004069 ORTHO05D004699 3.1e-16 88.6 90 42.2
Sopen08g028590 Solanum pennellii HOM05D004069 ORTHO05D004699 3.1e-16 88.6 90 42.2
vmacro08226 Vaccinium macrocarpon HOM05D004069 ORTHO05D004699 3.1e-16 88.6 92 41.3
Lj3g0025312 Lotus japonicus HOM05D004069 ORTHO05D004699 4.0e-16 88.2 89 42.7
MD13G1175600 Malus domestica HOM05D004069 ORTHO05D004699 4.0e-16 88.2 90 44.4
Nitab4.5_0001714g0140 Nicotiana tabacum HOM05D004069 ORTHO05D004699 4.0e-16 88.2 90 42.2
Nitab4.5_0009882g0010 Nicotiana tabacum HOM05D004069 ORTHO05D004699 4.0e-16 88.2 90 42.2
Peaxi162Scf00620g00918 Petunia axillaris HOM05D004069 ORTHO05D004699 4.0e-16 88.2 90 42.2
TAR633G1540 Trochodendron aralioides HOM05D004069 ORTHO05D004699 4.0e-16 88.2 86 43.0
Ah.01g005950 Amaranthus hybridus HOM05D004069 ORTHO05D004699 5.3e-16 87.8 92 41.3
Ciclev10006197m.g Citrus clementina HOM05D004069 ORTHO05D004699 5.3e-16 87.8 90 41.1
Duzib052G0156 Durio zibethinus HOM05D004069 ORTHO05D004699 5.3e-16 87.8 92 44.6
Duzib212G0467 Durio zibethinus HOM05D004069 ORTHO05D004699 5.3e-16 87.8 90 44.4
ECA240G0933 Erigeron canadensis HOM05D004069 ORTHO05D004699 5.3e-16 87.8 90 43.3
Glyma.03G021800 Glycine max HOM05D004069 ORTHO05D004699 5.3e-16 87.8 89 42.7
HanXRQChr03g0080011 Helianthus annuus HOM05D004069 ORTHO05D004699 5.3e-16 87.8 86 44.2
PGSC0003DMG400022739 Solanum tuberosum HOM05D004069 ORTHO05D004699 5.3e-16 87.8 90 42.2
Zm00001eb013640 Zea mays HOM05D004069 ORTHO05D004699 5.3e-16 87.8 96 43.8
Carub.0003s0574 Capsella rubella HOM05D004069 ORTHO05D004699 6.9e-16 87.4 90 43.3
Thhalv10021810m.g Eutrema salsugineum HOM05D004069 ORTHO05D004699 6.9e-16 87.4 90 44.4
FAN07G2596 Fragaria x ananassa HOM05D004069 ORTHO05D004699 6.9e-16 87.4 92 41.3
FAN22G1255 Fragaria x ananassa HOM05D004069 ORTHO05D004699 6.9e-16 87.4 92 41.3
Medtr8g035900 Medicago truncatula HOM05D004069 ORTHO05D004699 6.9e-16 87.4 89 42.7
Psat4g149640 Pisum sativum HOM05D004069 ORTHO05D004699 6.9e-16 87.4 89 42.7
Hund24899 Selenicereus undatus HOM05D004069 ORTHO05D004699 6.9e-16 87.4 92 40.2
Sc11g0003950 Simmondsia chinensis HOM05D004069 ORTHO05D004699 6.9e-16 87.4 90 42.2
TPR.G36608 Trifolium pratense HOM05D004069 ORTHO05D004699 6.9e-16 87.4 89 42.7
CARHR080830 Cardamine hirsuta HOM05D004069 ORTHO05D004699 9.0e-16 87.0 90 43.3
Lalb_Chr13g0291661 Lupinus albus HOM05D004069 ORTHO05D004699 9.0e-16 87.0 89 41.6
MD10G1048000 Malus domestica HOM05D004069 ORTHO05D004699 9.0e-16 87.0 90 42.2
Potri.008G196600 Populus trichocarpa HOM05D004069 ORTHO05D004699 9.0e-16 87.0 92 42.4
Sabra08G0163600 Salix brachista HOM05D004069 ORTHO05D004699 9.0e-16 87.0 92 42.4
Atru.chr4.2722 Acer truncatum HOM05D004069 ORTHO05D004699 1.2e-15 86.7 92 41.3
AL3G17240 Arabidopsis lyrata HOM05D004069 ORTHO05D004699 1.2e-15 86.7 90 43.3
AUR62022250 Chenopodium quinoa HOM05D004069 ORTHO05D004699 1.2e-15 86.7 92 41.3
FAN17G0096 Fragaria x ananassa HOM05D004069 ORTHO05D004699 1.2e-15 86.7 92 41.3
Glyma.01G145000 Glycine max HOM05D004069 ORTHO05D004699 1.2e-15 86.7 89 41.6
HanXRQChr13g0410171 Helianthus annuus HOM05D004069 ORTHO05D004699 1.2e-15 86.7 90 42.2
Hma1.2p1_0078F.1_g040910 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 1.2e-15 86.7 89 42.7
Hma1.2p1_1671F.1_g296710 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 1.2e-15 86.7 89 42.7
Lsat_1_v5_gn_5_49720 Lactuca sativa HOM05D004069 ORTHO05D004699 1.2e-15 86.7 90 43.3
Nn3g21235 Nelumbo nucifera HOM05D004069 ORTHO05D004699 1.2e-15 86.7 90 41.1
TWI09G1514 Tripterygium wilfordii HOM05D004069 ORTHO05D004699 1.2e-15 86.7 92 43.5
TWI73G0788 Tripterygium wilfordii HOM05D004069 ORTHO05D004699 1.2e-15 86.7 92 42.4
Actinidia40204 Actinidia chinensis HOM05D004069 ORTHO05D004699 1.5e-15 86.3 92 41.3
CiPaw.02G087900 Carya illinoinensis HOM05D004069 ORTHO05D004699 1.5e-15 86.3 92 40.2
Gohir.A10G103600 Gossypium hirsutum HOM05D004069 ORTHO05D004699 1.5e-15 86.3 92 43.5
QL06p006731 Quercus lobata HOM05D004069 ORTHO05D004699 1.5e-15 86.3 92 41.3
arahy.Tifrunner.gnm1.ann1.EYX6XU Arachis hypogaea HOM05D004069 ORTHO05D004699 2.0e-15 85.9 89 42.7
arahy.Tifrunner.gnm1.ann1.J8E67M Arachis hypogaea HOM05D004069 ORTHO05D004699 2.0e-15 85.9 89 42.7
BraA02t05469Z Brassica rapa HOM05D004069 ORTHO05D004699 2.0e-15 85.9 90 43.3
CARHR194200 Cardamine hirsuta HOM05D004069 ORTHO05D004699 2.0e-15 85.9 90 43.3
Thhalv10015085m.g Eutrema salsugineum HOM05D004069 ORTHO05D004699 2.0e-15 85.9 90 43.3
Manes.03G189600 Manihot esculenta HOM05D004069 ORTHO05D004699 2.0e-15 85.9 92 41.3
Sp6g25590 Schrenkiella parvula HOM05D004069 ORTHO05D004699 2.0e-15 85.9 90 43.3
Sed0022789 Sechium edule HOM05D004069 ORTHO05D004699 2.0e-15 85.9 90 42.2
Actinidia23443 Actinidia chinensis HOM05D004069 ORTHO05D004699 2.6e-15 85.5 92 41.3
ATR0208G034 Amborella trichopoda HOM05D004069 ORTHO05D004699 2.6e-15 85.5 90 42.2
CDE09G1375 Ceratophyllum demersum HOM05D004069 ORTHO05D004699 2.6e-15 85.5 90 40.0
Prupe.1G144300 Prunus persica HOM05D004069 ORTHO05D004699 2.6e-15 85.5 90 41.1
TAR362G0867 Trochodendron aralioides HOM05D004069 ORTHO05D004699 2.6e-15 85.5 90 40.0
unitig_46.g18583 Utricularia gibba HOM05D004069 ORTHO05D004699 2.6e-15 85.5 93 39.8
GSVIVG01017834001 Vitis vinifera HOM05D004069 ORTHO05D004699 2.6e-15 85.5 92 40.2
Actinidia00062 Actinidia chinensis HOM05D004069 ORTHO05D004699 3.4e-15 85.1 92 40.2
Aqoxy2G03156 Aquilegia oxysepala HOM05D004069 ORTHO05D004699 3.4e-15 85.1 90 42.2
AT3G06310 Arabidopsis thaliana HOM05D004069 ORTHO05D004699 3.4e-15 85.1 90 42.2
MD16G1177400 Malus domestica HOM05D004069 ORTHO05D004699 3.4e-15 85.1 90 41.1
MCO10G196 Micromonas commoda HOM05D004069 ORTHO05D004699 3.4e-15 85.1 93 40.9
SEGI_25177 Sequoiadendron giganteum HOM05D004069 ORTHO05D004699 3.4e-15 85.1 90 42.2
THA.LOC104818836 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 3.4e-15 85.1 92 40.2
vmacro15276 Vaccinium macrocarpon HOM05D004069 ORTHO05D004699 3.4e-15 85.1 92 40.2
AL6G30150 Arabidopsis lyrata HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
AT5G18800 Arabidopsis thaliana HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BcaB01g04889 Brassica carinata HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BcaB01g05275 Brassica carinata HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BcaC03g13618 Brassica carinata HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
A03p09140 Brassica napus HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
A10p20810 Brassica napus HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
C03p10670 Brassica napus HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BolC2t06916H Brassica oleracea HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BolC3t13543H Brassica oleracea HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BraA03t10237Z Brassica rapa HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
BraA10t44146Z Brassica rapa HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
Carub.0006s1710 Capsella rubella HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 42.2
Cc03_g02560 Coffea canephora HOM05D004069 ORTHO05D004699 4.4e-15 84.7 90 41.1
Lalb_Chr07g0189611 Lupinus albus HOM05D004069 ORTHO05D004699 4.4e-15 84.7 89 39.3
Sabra10G0013600 Salix brachista HOM05D004069 ORTHO05D004699 4.4e-15 84.7 92 40.2
CSS0012120 Camellia sinensis var. sinensis HOM05D004069 ORTHO05D004699 5.8e-15 84.3 92 41.3
Cfa015517 Carpinus fangiana HOM05D004069 ORTHO05D004699 5.8e-15 84.3 92 39.1
Aa31LG11G10890 Aethionema arabicum HOM05D004069 ORTHO05D004699 7.6e-15 84.0 90 41.1
BcaC04g18646 Brassica carinata HOM05D004069 ORTHO05D004699 7.6e-15 84.0 90 41.1
C09p57690 Brassica napus HOM05D004069 ORTHO05D004699 7.6e-15 84.0 90 41.1
BolC9t58640H Brassica oleracea HOM05D004069 ORTHO05D004699 7.6e-15 84.0 90 41.1
Manes.15G019000 Manihot esculenta HOM05D004069 ORTHO05D004699 7.6e-15 84.0 92 40.2
PGR031G1560 Punica granatum HOM05D004069 ORTHO05D004699 7.6e-15 84.0 90 42.2
Rhsim02G0014600 Rhododendron simsii HOM05D004069 ORTHO05D004699 7.6e-15 84.0 92 40.2
unitig_37.g12295 Utricularia gibba HOM05D004069 ORTHO05D004699 7.6e-15 84.0 90 38.9
BcaB08g36643 Brassica carinata HOM05D004069 ORTHO05D004699 1.3e-14 83.2 90 41.1
MSTRG.9205 Avicennia marina HOM05D004069 ORTHO05D004699 1.7e-14 82.8 90 42.2
Hma1.2p1_0643F.1_g194630 Hydrangea macrophylla HOM05D004069 ORTHO05D004699 1.7e-14 82.8 92 38.0
Potri.010G026000 Populus trichocarpa HOM05D004069 ORTHO05D004699 1.7e-14 82.8 92 39.1
Actinidia32378 Actinidia chinensis HOM05D004069 ORTHO05D004699 2.2e-14 82.4 90 40.0
Sp3g05220 Schrenkiella parvula HOM05D004069 ORTHO05D004699 2.2e-14 82.4 90 42.2
Migut.F02022 Erythranthe guttata HOM05D004069 ORTHO05D004699 3.8e-14 81.6 90 41.1
Aqoxy5G00598 Aquilegia oxysepala HOM05D004069 ORTHO05D004699 6.4e-14 80.9 90 38.9
Oeu007709.1 Olea europaea HOM05D004069 ORTHO05D004699 8.4e-14 80.5 90 37.8
PGR031G3162 Punica granatum HOM05D004069 ORTHO05D004699 1.1e-13 80.1 90 40.0
A02p05100 Brassica napus HOM05D000415 ORTHO05D002707 2.4e-13 79.0 88 40.9
C02p10150 Brassica napus HOM05D000415 ORTHO05D002707 2.4e-13 79.0 88 40.9
DCAR_002434 Daucus carota HOM05D004069 ORTHO05D004699 7.1e-13 77.4 90 37.8
THA.LOC104827125 Tarenaya hassleriana HOM05D004069 ORTHO05D004699 3.5e-12 75.1 92 39.1
Dinv44442 Davidia involucrata HOM05D004069 ORTHO05D004699 2.5e-10 68.9 69 40.6
Dinv38340 Davidia involucrata HOM05D004069 ORTHO05D004699 2.4e-08 62.4 79 36.7
CDE02G1037 Ceratophyllum demersum HOM05D003181 ORTHO05D003689 2.0e-07 59.3 68 36.8
MELO3C035505.2 Cucumis melo HOM05D004069 ORTHO05D004699 1.3e-06 56.6 46 50.0
PGSC0003DMG400012496 Solanum tuberosum HOM05D004069 ORTHO05D004699 2.9e-06 55.5 69 37.7
VMungo0251G3681 Vigna mungo HOM05D039118 ORTHO05D004699 3.8e-06 55.1 42 52.4
ClCG03G006350 Citrullus lanatus HOM05D004069 ORTHO05D004699 4.9e-06 54.7 53 43.4


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