Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.6e-190 668.7 377 100.0
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 1.0e-88 331.3 322 54.0
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 7.9e-78 295.0 326 49.4
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 1.0e-77 294.7 326 50.3
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 3.0e-77 293.1 324 49.4
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 6.7e-77 292.0 328 49.1
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.0e-76 290.4 321 48.0
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 3.3e-76 289.7 321 47.4
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 2.2e-75 287.0 320 47.2
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.8e-75 286.6 324 47.8
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 4.8e-75 285.8 322 48.1
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 8.2e-75 285.0 322 47.5
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 8.2e-75 285.0 321 46.7
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 8.2e-75 285.0 321 46.7
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 8.2e-75 285.0 319 47.0
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 8.2e-75 285.0 320 49.7
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.8e-74 283.9 319 50.2
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 2.4e-74 283.5 320 48.8
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 5.3e-74 282.3 319 48.3
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 6.9e-74 282.0 325 46.8
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 9.1e-74 281.6 323 47.4
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 1.2e-73 281.2 321 46.1
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.5e-73 280.8 327 47.1
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.5e-73 280.8 321 46.1
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 2.0e-73 280.4 320 46.9
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 2.6e-73 280.0 320 46.9
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 4.5e-73 279.3 320 47.2
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 7.7e-73 278.5 321 45.8
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 1.0e-72 278.1 323 47.4
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 1.3e-72 277.7 321 47.0
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 3.8e-72 276.2 321 48.0
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 6.5e-72 275.4 326 45.4
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 8.5e-72 275.0 321 45.8
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 1.1e-71 274.6 326 47.9
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 1.1e-71 274.6 326 46.9
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 1.1e-71 274.6 326 47.2
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.9e-71 273.9 319 47.6
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 4.2e-71 272.7 320 47.2
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 7.2e-71 271.9 320 46.6
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.2e-71 271.9 325 47.1
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 7.2e-71 271.9 321 46.1
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 9.4e-71 271.6 326 44.8
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 9.4e-71 271.6 326 46.6
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.2e-70 271.2 326 47.2
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.6e-70 270.8 322 47.5
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 6.1e-70 268.9 326 44.8
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 7.9e-70 268.5 326 44.2
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.8e-69 267.3 321 46.1
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.8e-69 267.3 326 44.5
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.8e-69 267.3 326 44.5
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 3.9e-69 266.2 325 45.8
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 5.2e-69 265.8 326 46.0
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 8.8e-69 265.0 328 46.6
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 2.0e-68 263.8 329 45.9
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 9.7e-68 261.5 319 45.1
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 9.7e-68 261.5 321 44.5
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.3e-67 261.2 321 44.9
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.4e-66 257.7 281 50.9
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 4.1e-66 256.1 283 48.8
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 1.2e-65 254.6 332 43.1
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.5e-65 252.7 322 44.7
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.9e-63 247.3 321 42.7
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.6e-62 244.2 384 38.5
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 6.1e-62 242.3 332 41.9
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 4.8e-59 232.6 283 45.6
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.7e-57 226.9 265 45.7
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 3.5e-57 226.5 329 39.8
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 1.0e-56 224.9 441 34.5
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 5.0e-56 222.6 333 39.3
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.1e-55 221.5 278 43.2
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.9e-55 220.7 270 43.0
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.2e-55 219.5 269 44.6
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 7.2e-55 218.8 333 40.5
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 9.8e-52 208.4 274 44.9
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.3e-51 208.0 401 35.4
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.3e-51 208.0 277 42.2
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 4.8e-51 206.1 297 42.1
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 3.1e-50 203.4 229 47.6
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.9e-47 194.1 318 41.5
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 9.5e-47 191.8 334 37.4
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 4.0e-45 186.4 322 36.0
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 8.8e-45 185.3 324 37.0
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.4e-42 177.9 338 37.0
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.7e-41 173.7 329 34.0
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 5.0e-40 169.5 326 34.7
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 1.9e-39 167.5 318 33.0
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 9.5e-39 165.2 281 39.5
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 9.5e-39 165.2 228 43.4
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 2.8e-38 163.7 312 34.6
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 2.8e-38 163.7 207 43.5
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 9.8e-36 155.2 189 43.9
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 9.2e-34 148.7 321 32.7
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 2.3e-32 144.1 190 43.2
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 4.7e-30 136.3 266 33.5
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.0e-29 135.2 184 41.3
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 8.9e-29 132.1 174 44.3
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 5.8e-28 129.4 168 44.0
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 3.2e-26 123.6 180 40.6
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.0e-25 120.9 174 40.2
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 8.6e-24 115.5 89 57.3
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 9.5e-23 112.1 268 32.1
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 6.2e-22 109.4 139 46.0
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 2.1e-17 94.4 113 42.5
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 1.0e-16 92.0 204 30.9
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 2.3e-16 90.9 129 35.7
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 2.5e-15 87.4 283 27.6
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.6e-14 83.6 98 44.9
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 3.6e-14 83.6 239 29.3
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.6e-14 83.6 264 27.7
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 5.2e-13 79.7 127 40.2
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 6.8e-13 79.3 264 26.1
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 3.8e-11 73.6 50 70.0
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 8.4e-11 72.4 243 28.4
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.4e-10 71.6 242 28.1
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 1.4e-10 71.6 93 40.9
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.9e-10 71.2 102 42.2
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 1.9e-10 71.2 50 68.0
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.1e-10 70.1 99 39.4
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 1.5e-07 61.6 170 30.6
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 2.5e-07 60.8 168 32.1
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 3.3e-07 60.5 153 28.1
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 9.6e-07 58.9 64 46.9
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 1.6e-06 58.2 112 33.0
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 4.7e-06 56.6 112 35.7
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 4.7e-06 56.6 179 29.1
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 6.2e-06 56.2 179 30.2
PRCOL_00002005 Prasinoderma coloniale HOM05D003793 ORTHO05D004471 6.2e-06 56.2 119 40.3
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 6.2e-06 56.2 166 26.5
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 8.1e-06 55.8 167 27.5
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 8.1e-06 55.8 167 28.1


User provided reference genes

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