Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002046 Prasinoderma coloniale HOM05D021006 ORTHO05D024937 0.0e+00 1088.9 550 100.0
MCO15G445 Micromonas commoda HOM05D003516 ORTHO05D004068 3.8e-81 306.6 489 37.4
MCO12G151 Micromonas commoda HOM05D003516 ORTHO05D004068 1.3e-17 95.5 469 26.0
Cre06.g277100 Chlamydomonas reinhardtii HOM05D003516 ORTHO05D004068 3.4e-13 80.9 194 28.4
CDE04G1400 Ceratophyllum demersum HOM05D003516 ORTHO05D004068 7.6e-13 79.7 149 32.9
Hund15565 Selenicereus undatus HOM05D003516 ORTHO05D004068 7.6e-13 79.7 156 31.4
CBR_g38908 Chara braunii HOM05D021006 ORTHO05D024937 5.0e-12 77.0 154 32.5
CAN.G206.193 Capsicum annuum HOM05D003516 ORTHO05D004068 8.4e-12 76.3 151 33.1
Actinidia01972 Actinidia chinensis HOM05D003516 ORTHO05D004068 1.9e-11 75.1 146 32.9
HPP92_023623 Vanilla planifolia HOM05D003516 ORTHO05D004068 3.2e-11 74.3 147 31.3
MELO3C009836.2 Cucumis melo HOM05D003516 ORTHO05D004068 5.5e-11 73.6 144 31.9
CsaV3_3G041030 Cucumis sativus L. HOM05D003516 ORTHO05D004068 7.1e-11 73.2 144 31.2
MBI19_g41331_MAGBIO Magnolia biondii HOM05D003516 ORTHO05D004068 9.3e-11 72.8 150 32.7
PRCOL_00004505 Prasinoderma coloniale HOM05D005723 ORTHO05D005968 1.2e-10 72.4 207 27.1
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 1.6e-10 72.0 144 31.2
CiPaw.03G092000 Carya illinoinensis HOM05D003516 ORTHO05D004068 2.1e-10 71.6 153 30.1
HPP92_020419 Vanilla planifolia HOM05D003516 ORTHO05D004068 2.1e-10 71.6 147 32.0
Phvul.004G033000 Phaseolus vulgaris HOM05D003516 ORTHO05D004068 2.7e-10 71.2 143 32.2
PGR056G0004 Punica granatum HOM05D003516 ORTHO05D004068 3.5e-10 70.9 152 32.2
Sc14g0006110 Simmondsia chinensis HOM05D003516 ORTHO05D004068 3.5e-10 70.9 142 31.7
PGSC0003DMG400001349 Solanum tuberosum HOM05D003516 ORTHO05D004068 3.5e-10 70.9 146 31.5
AagrBONN_evm.TU.Sc2ySwM_228.5734 Anthoceros agrestis HOM05D003516 ORTHO05D004068 4.6e-10 70.5 170 27.6
CBR_g38904 Chara braunii HOM05D021006 ORTHO05D024937 4.6e-10 70.5 158 30.4
HanXRQChr14g0448661 Helianthus annuus HOM05D003516 ORTHO05D004068 6.1e-10 70.1 144 29.9
Lalb_Chr02g0159071 Lupinus albus HOM05D003516 ORTHO05D004068 6.1e-10 70.1 150 30.7
CSS0008989 Camellia sinensis var. sinensis HOM05D003516 ORTHO05D004068 7.9e-10 69.7 146 32.2
Rhsim10G0034300 Rhododendron simsii HOM05D003516 ORTHO05D004068 7.9e-10 69.7 150 30.0
Glyma.08G241300 Glycine max HOM05D003516 ORTHO05D004068 1.0e-09 69.3 146 32.2
Nitab4.5_0000565g0050 Nicotiana tabacum HOM05D003516 ORTHO05D004068 1.0e-09 69.3 146 30.8
Psat1g105320 Pisum sativum HOM05D003516 ORTHO05D004068 1.0e-09 69.3 149 30.9
Psat1g105360 Pisum sativum HOM05D003516 ORTHO05D004068 1.0e-09 69.3 149 30.9
CBR_g38900 Chara braunii HOM05D021006 ORTHO05D024937 1.3e-09 68.9 158 29.7
Lj1g0021677 Lotus japonicus HOM05D003516 ORTHO05D004068 1.8e-09 68.6 151 31.1
Nitab4.5_0008573g0050 Nicotiana tabacum HOM05D003516 ORTHO05D004068 1.8e-09 68.6 151 29.8
MSTRG.3024 Avicennia marina HOM05D003516 ORTHO05D004068 2.3e-09 68.2 153 31.4
Hma1.2p1_0255F.1_g103250 Hydrangea macrophylla HOM05D003516 ORTHO05D004068 2.3e-09 68.2 146 32.2
Nitab4.5_0000565g0040 Nicotiana tabacum HOM05D003516 ORTHO05D004068 2.3e-09 68.2 146 30.8
Ca_04865_v3 Cicer arietinum L. HOM05D003516 ORTHO05D004068 3.0e-09 67.8 149 30.9
TAR371G1100 Trochodendron aralioides HOM05D003516 ORTHO05D004068 6.7e-09 66.6 156 29.5
Aqoxy3G03552 Aquilegia oxysepala HOM05D003516 ORTHO05D004068 8.7e-09 66.2 147 30.6
arahy.Tifrunner.gnm1.ann1.BNNE9K Arachis hypogaea HOM05D003516 ORTHO05D004068 8.7e-09 66.2 158 28.5
TAR371G0601 Trochodendron aralioides HOM05D003516 ORTHO05D004068 8.7e-09 66.2 146 30.8
arahy.Tifrunner.gnm1.ann1.3ST4SV Arachis hypogaea HOM05D003516 ORTHO05D004068 2.5e-08 64.7 146 30.1
PRCOL_00005991 Prasinoderma coloniale HOM05D003516 ORTHO05D004068 3.3e-08 64.3 156 30.8
Pp3c7_23970 Physcomitrium patens HOM05D003516 ORTHO05D004068 4.3e-08 63.9 474 22.4
HanXRQChr17g0546741 Helianthus annuus HOM05D003516 ORTHO05D004068 7.4e-08 63.2 137 30.7
Ah.12g062520 Amaranthus hybridus HOM05D003516 ORTHO05D004068 2.2e-07 61.6 152 30.9
Nitab4.5_0003216g0010 Nicotiana tabacum HOM05D003516 ORTHO05D004068 2.8e-07 61.2 146 30.1
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 2.8e-07 61.2 145 29.7
TAR371G1088 Trochodendron aralioides HOM05D003516 ORTHO05D004068 3.7e-07 60.8 156 30.1
Mapoly0066s0102 Marchantia polymorpha HOM05D005532 ORTHO05D006873 4.8e-07 60.5 164 26.8
EL10Ac2g03040 Beta vulgaris HOM05D003516 ORTHO05D004068 1.1e-06 59.3 147 27.9
BcaB07g33482 Brassica carinata HOM05D005532 ORTHO05D006873 2.4e-06 58.2 259 24.7
AUR62034468 Chenopodium quinoa HOM05D003516 ORTHO05D004068 2.4e-06 58.2 148 29.7
HPP92_011271 Vanilla planifolia HOM05D005532 ORTHO05D006873 3.1e-06 57.8 153 22.9


User provided reference genes

Program Settings