Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002040 Prasinoderma coloniale HOM05D005298 ORTHO05D008015 0.0e+00 1795.0 978 100.0
Mapoly0002s0222 Marchantia polymorpha HOM05D005298 ORTHO05D008015 3.6e-74 284.3 831 30.6
Pp3c27_6680 Physcomitrium patens HOM05D005298 ORTHO05D008015 1.1e-73 282.7 836 31.2
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 2.1e-66 258.5 711 30.4
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 4.4e-64 250.8 733 28.9
Dinv29532 Davidia involucrata HOM05D005298 ORTHO05D008015 9.9e-64 249.6 813 27.9
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 9.9e-64 249.6 714 28.2
Actinidia18497 Actinidia chinensis HOM05D005298 ORTHO05D008015 1.7e-63 248.8 733 28.2
Cfa015712 Carpinus fangiana HOM05D005298 ORTHO05D008015 1.7e-63 248.8 701 29.0
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 4.9e-63 247.3 717 29.1
Pp3c1_32943 Physcomitrium patens HOM05D005298 ORTHO05D008015 6.4e-63 246.9 815 28.6
Pp3c21_7100 Physcomitrium patens HOM05D005298 ORTHO05D008015 8.4e-63 246.5 818 28.0
Pp3c21_7106 Physcomitrium patens HOM05D005298 ORTHO05D008015 8.4e-63 246.5 818 28.0
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 7.1e-62 243.4 715 28.1
DCAR_002539 Daucus carota HOM05D005298 ORTHO05D008015 1.6e-61 242.3 729 28.3
Eucgr.H04107 Eucalyptus grandis HOM05D005298 ORTHO05D008015 1.6e-61 242.3 812 26.8
Lalb_Chr07g0181831 Lupinus albus HOM05D005298 ORTHO05D008015 1.0e-60 239.6 810 26.5
RcHm_v2.0_Chr4g0426661 Rosa chinensis HOM05D005298 ORTHO05D008015 1.3e-60 239.2 714 28.4
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 1.7e-60 238.8 810 26.9
Atru.chr4.3122 Acer truncatum HOM05D005298 ORTHO05D008015 3.0e-60 238.0 706 27.5
CANSAT78G1118 Cannabis sativa HOM05D005298 ORTHO05D008015 3.0e-60 238.0 722 28.4
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 6.6e-60 236.9 803 26.7
COL.COLO4_34539 Corchorus olitorius HOM05D005298 ORTHO05D008015 1.1e-59 236.1 697 28.0
SMO200G0212 Selaginella moellendorffii HOM05D005298 ORTHO05D008015 3.3e-59 234.6 830 27.7
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 7.3e-59 233.4 776 28.0
Oeu020287.1 Olea europaea HOM05D005298 ORTHO05D008015 9.6e-59 233.0 714 28.2
TAR362G0426 Trochodendron aralioides HOM05D005298 ORTHO05D008015 1.6e-58 232.3 729 27.6
Ciclev10004217m.g Citrus clementina HOM05D005298 ORTHO05D008015 3.6e-58 231.1 807 27.1
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 6.2e-58 230.3 716 28.4
EL10Ac3g06277 Beta vulgaris HOM05D005298 ORTHO05D008015 8.1e-58 229.9 697 28.4
CiPaw.01G131300 Carya illinoinensis HOM05D005298 ORTHO05D008015 8.1e-58 229.9 713 28.8
ATR0796G315 Amborella trichopoda HOM05D005298 ORTHO05D008015 1.4e-57 229.2 810 26.7
Haze_00801 Corylus avellana HOM05D005298 ORTHO05D008015 2.4e-57 228.4 714 27.7
ECA233G2380 Erigeron canadensis HOM05D005298 ORTHO05D008015 2.4e-57 228.4 734 26.4
PGR004G2663 Punica granatum HOM05D005298 ORTHO05D008015 2.4e-57 228.4 815 26.6
PSO210G1072 Papaver somniferum HOM05D005298 ORTHO05D008015 4.0e-57 227.6 807 27.1
Zm00001eb164790 Zea mays HOM05D005298 ORTHO05D008015 5.3e-57 227.3 808 26.2
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 6.9e-57 226.9 700 28.1
Lj3A839G57 Lonicera japonica HOM05D005298 ORTHO05D008015 6.9e-57 226.9 799 26.9
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea HOM05D005298 ORTHO05D008015 9.0e-57 226.5 818 26.5
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 2.0e-56 225.3 711 29.3
TPR.G12648 Trifolium pratense HOM05D005298 ORTHO05D008015 2.0e-56 225.3 725 28.0
FAN07G1807 Fragaria x ananassa HOM05D005298 ORTHO05D008015 3.4e-56 224.6 793 28.2
Sabra10G0117500 Salix brachista HOM05D005298 ORTHO05D008015 4.5e-56 224.2 704 26.6
Glyma.17G038500 Glycine max HOM05D005298 ORTHO05D008015 9.9e-56 223.0 748 26.6
VMungo1215G2609 Vigna mungo HOM05D005298 ORTHO05D008015 9.9e-56 223.0 812 26.1
C05p49050 Brassica napus HOM05D005298 ORTHO05D008015 1.7e-55 222.2 709 27.1
CsaV3_6G000130 Cucumis sativus L. HOM05D005298 ORTHO05D008015 2.2e-55 221.9 721 27.5
Thhalv10019950m.g Eutrema salsugineum HOM05D005298 ORTHO05D008015 2.9e-55 221.5 709 26.7
BolC5t33645H Brassica oleracea HOM05D005298 ORTHO05D008015 3.8e-55 221.1 709 26.9
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 4.9e-55 220.7 717 27.5
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea HOM05D005298 ORTHO05D008015 6.4e-55 220.3 816 26.2
BcaC05g28796 Brassica carinata HOM05D005298 ORTHO05D008015 8.4e-55 219.9 709 26.9
Solyc01g057520.4 Solanum lycopersicum HOM05D005298 ORTHO05D008015 3.2e-54 218.0 709 29.1
Glyma.07G233500 Glycine max HOM05D005298 ORTHO05D008015 5.4e-54 217.2 823 26.5
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 5.4e-54 217.2 813 26.6
Sed0008409 Sechium edule HOM05D005298 ORTHO05D008015 5.4e-54 217.2 723 27.1
Gohir.D02G063000 Gossypium hirsutum HOM05D005298 ORTHO05D008015 7.1e-54 216.9 810 26.0
Gohir.A02G057201 Gossypium hirsutum HOM05D005298 ORTHO05D008015 9.3e-54 216.5 810 26.0
Os11g0695900 Oryza sativa ssp. japonica HOM05D005298 ORTHO05D008015 9.3e-54 216.5 817 25.8
Gorai.005G070900 Gossypium raimondii HOM05D005298 ORTHO05D008015 4.6e-53 214.2 810 26.2
Lsat_1_v5_gn_6_69380 Lactuca sativa HOM05D005298 ORTHO05D008015 4.6e-53 214.2 706 25.6
Sp3g15510 Schrenkiella parvula HOM05D005298 ORTHO05D008015 4.6e-53 214.2 712 26.7
Phvul.003G119400 Phaseolus vulgaris HOM05D005298 ORTHO05D008015 6.0e-53 213.8 809 25.6
Aa31LG8G4260 Aethionema arabicum HOM05D005298 ORTHO05D008015 1.0e-52 213.0 725 27.7
Psat0ss1196g0600 Pisum sativum HOM05D005298 ORTHO05D008015 3.0e-52 211.5 827 26.0
Carub.0003s1705 Capsella rubella HOM05D005298 ORTHO05D008015 6.7e-52 210.3 697 27.0
Ca_21388_v3 Cicer arietinum L. HOM05D005298 ORTHO05D008015 6.7e-52 210.3 818 25.8
MCO02G049 Micromonas commoda HOM05D005298 ORTHO05D008015 1.1e-51 209.5 869 29.2
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 1.9e-51 208.8 813 27.2
Nitab4.5_0000169g0140 Nicotiana tabacum HOM05D005298 ORTHO05D008015 4.3e-51 207.6 803 26.5
A05p32420 Brassica napus HOM05D005298 ORTHO05D008015 3.7e-50 204.5 709 26.1
BraA05t22069Z Brassica rapa HOM05D005298 ORTHO05D008015 3.7e-50 204.5 709 26.1
AL3G30390 Arabidopsis lyrata HOM05D005298 ORTHO05D008015 1.1e-49 203.0 709 26.4
Peaxi162Scf00126g10123 Petunia axillaris HOM05D005298 ORTHO05D008015 1.4e-49 202.6 804 27.2
AT3G17340 Arabidopsis thaliana HOM05D005298 ORTHO05D008015 3.1e-49 201.4 708 26.4
CARHR092660 Cardamine hirsuta HOM05D005298 ORTHO05D008015 3.1e-49 201.4 513 29.4
HanXRQChr09g0251541 Helianthus annuus HOM05D005298 ORTHO05D008015 9.0e-49 199.9 814 24.1
Ah.07g203800 Amaranthus hybridus HOM05D005298 ORTHO05D008015 1.3e-47 196.1 815 26.7
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 3.8e-47 194.5 857 24.2
CAN.G14.34 Capsicum annuum HOM05D005298 ORTHO05D008015 8.4e-47 193.4 749 26.8
Nitab4.5_0000992g0090 Nicotiana tabacum HOM05D005298 ORTHO05D008015 1.8e-44 185.7 821 26.7
TWI09G0537 Tripterygium wilfordii HOM05D005298 ORTHO05D008015 2.3e-44 185.3 724 25.7
ClCG06G004280 Citrullus lanatus HOM05D005298 ORTHO05D008015 5.7e-43 180.6 622 27.3
vmacro07993 Vaccinium macrocarpon HOM05D005298 ORTHO05D008015 1.3e-39 169.5 726 25.8
CSS0004853 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 2.9e-39 168.3 642 26.6
MELO3C021240.2 Cucumis melo HOM05D005298 ORTHO05D008015 3.8e-39 167.9 716 24.6
Cpa.g.sc146.46 Carica papaya HOM05D005298 ORTHO05D008015 1.9e-38 165.6 483 28.8
AUR62029998 Chenopodium quinoa HOM05D005298 ORTHO05D008015 3.3e-35 154.8 889 24.4
Duzib151G1192 Durio zibethinus HOM05D005298 ORTHO05D008015 3.3e-35 154.8 795 22.6
Medtr4g123690 Medicago truncatula HOM05D005298 ORTHO05D008015 4.3e-35 154.5 343 33.2
GSVIVG01034907001 Vitis vinifera HOM05D005298 ORTHO05D008015 7.4e-35 153.7 509 27.3
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 2.2e-31 142.1 464 26.5
Pp3c1_32940 Physcomitrium patens HOM05D005298 ORTHO05D008015 3.2e-22 111.7 419 27.0
SEGI_25654 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 2.1e-21 109.0 442 26.0
MD15G1386700 Malus domestica HOM05D005298 ORTHO05D008015 5.0e-15 87.8 348 23.9
GSVIVG01017664001 Vitis vinifera HOM05D005298 ORTHO05D008015 6.5e-15 87.4 698 23.2
GSVIVG01017599001 Vitis vinifera HOM05D005298 ORTHO05D008015 8.8e-12 77.0 400 23.8
GSVIVG01017598001 Vitis vinifera HOM05D005298 ORTHO05D008015 2.4e-09 68.9 76 40.8
FvH4_4g20840 Fragaria vesca HOM05D005298 ORTHO05D008015 1.0e-07 63.5 118 35.6
Zm00001eb026980 Zea mays HOM05D005298 ORTHO05D008015 1.0e-07 63.5 173 30.1
MCO08G280 Micromonas commoda HOM05D005298 ORTHO05D269935 8.5e-07 60.5 668 24.0
Zm00001eb304680 Zea mays HOM05D005298 ORTHO05D008015 1.5e-06 59.7 176 27.8
SEGI_33872 Sequoiadendron giganteum HOM05D005298 ORTHO05D008015 5.5e-06 57.8 79 39.2


User provided reference genes

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