Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 4.7e-117 424.5 205 100.0
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 2.6e-38 162.9 194 45.9
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 9.7e-38 161.0 191 45.5
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 2.0e-35 153.3 192 42.2
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 2.6e-35 152.9 195 41.0
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 4.5e-35 152.1 195 41.5
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 2.2e-34 149.8 193 42.0
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 2.9e-34 149.4 205 38.5
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 6.5e-34 148.3 197 38.6
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 1.1e-33 147.5 190 42.6
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 1.9e-33 146.7 195 40.0
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 1.9e-33 146.7 195 38.5
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 1.9e-33 146.7 195 40.5
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 1.9e-33 146.7 197 38.6
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 1.9e-33 146.7 190 42.1
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 3.2e-33 146.0 195 40.0
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 3.2e-33 146.0 192 42.2
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 9.4e-33 144.4 193 40.9
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 9.4e-33 144.4 192 42.7
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 9.4e-33 144.4 190 41.1
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 9.4e-33 144.4 192 41.7
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 9.4e-33 144.4 191 42.9
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 9.4e-33 144.4 192 41.1
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 1.2e-32 144.1 195 37.9
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 1.6e-32 143.7 190 40.5
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 2.1e-32 143.3 192 40.6
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 2.1e-32 143.3 195 39.5
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 2.7e-32 142.9 192 41.7
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 2.7e-32 142.9 189 41.8
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 3.6e-32 142.5 192 40.6
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 3.6e-32 142.5 194 42.3
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 4.7e-32 142.1 190 40.0
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 4.7e-32 142.1 190 41.1
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 4.7e-32 142.1 190 40.0
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 4.7e-32 142.1 192 39.1
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 6.1e-32 141.7 192 39.6
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 1.0e-31 141.0 190 40.5
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 1.0e-31 141.0 203 38.9
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 1.4e-31 140.6 192 38.5
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 1.4e-31 140.6 192 39.1
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 1.8e-31 140.2 190 40.0
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 1.8e-31 140.2 194 38.1
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 1.8e-31 140.2 192 40.6
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 1.8e-31 140.2 190 40.0
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 1.8e-31 140.2 190 40.0
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 1.8e-31 140.2 190 40.5
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 2.3e-31 139.8 192 38.5
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 2.3e-31 139.8 190 40.5
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 3.0e-31 139.4 190 40.5
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 3.0e-31 139.4 190 39.5
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 3.0e-31 139.4 190 40.5
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 3.0e-31 139.4 192 38.5
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 3.0e-31 139.4 190 38.9
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 3.0e-31 139.4 190 39.5
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 4.0e-31 139.0 190 38.9
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 4.0e-31 139.0 192 39.1
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 4.0e-31 139.0 192 39.1
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 4.0e-31 139.0 191 39.8
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 5.2e-31 138.7 192 38.5
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 5.2e-31 138.7 190 40.0
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 6.7e-31 138.3 190 38.9
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 6.7e-31 138.3 190 40.0
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 8.8e-31 137.9 190 39.5
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 8.8e-31 137.9 190 40.0
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 8.8e-31 137.9 190 40.0
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 8.8e-31 137.9 194 40.2
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 1.2e-30 137.5 192 38.5
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 1.2e-30 137.5 190 39.5
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 1.5e-30 137.1 196 39.3
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 1.5e-30 137.1 190 39.5
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 2.6e-30 136.3 192 40.1
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 2.6e-30 136.3 192 38.5
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 3.3e-30 136.0 190 38.9
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 4.4e-30 135.6 190 39.5
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 4.4e-30 135.6 190 38.9
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 4.4e-30 135.6 180 40.6
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 4.4e-30 135.6 190 39.5
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 4.4e-30 135.6 196 37.8
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 7.5e-30 134.8 202 39.6
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 7.5e-30 134.8 194 39.7
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 9.7e-30 134.4 192 39.1
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 1.7e-29 133.7 189 39.2
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 1.7e-29 133.7 190 38.4
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 2.2e-29 133.3 190 38.4
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 2.8e-29 132.9 189 39.2
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 2.8e-29 132.9 196 38.8
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 3.7e-29 132.5 207 39.1
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 4.8e-29 132.1 190 36.8
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 8.2e-29 131.3 192 38.0
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 1.1e-28 131.0 193 39.9
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 1.4e-28 130.6 193 38.9
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 1.4e-28 130.6 193 38.9
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 3.1e-28 129.4 187 38.5
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 7.0e-28 128.3 192 38.5
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 1.2e-27 127.5 218 34.9
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 2.0e-27 126.7 192 38.0
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 2.7e-27 126.3 219 35.6
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 4.5e-27 125.6 171 39.8
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 5.5e-25 118.6 182 36.3
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 9.4e-25 117.9 149 41.6
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 8.8e-23 111.3 194 34.0
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 5.7e-22 108.6 136 39.7
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 3.1e-20 102.8 125 42.4
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 9.1e-20 101.3 143 40.6
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 1.5e-17 94.0 110 45.5
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 1.4e-15 87.4 129 38.8
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 2.2e-13 80.1 131 38.9
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 4.9e-13 79.0 110 37.3
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 2.9e-10 69.7 70 45.7
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 8.6e-10 68.2 78 43.6
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 6.8e-07 58.5 104 38.5


User provided reference genes

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