Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00001844 Prasinoderma coloniale HOM05D005888 ORTHO05D007791 1.8e-243 845.5 426 100.0
MCO16G034 Micromonas commoda HOM05D005888 ORTHO05D007791 1.3e-36 158.3 534 30.3
Prupe.3G304500 Prunus persica HOM05D005888 ORTHO05D007791 2.9e-36 157.1 450 31.3
Glyma.16G057700 Glycine max HOM05D005888 ORTHO05D007791 8.5e-36 155.6 448 30.8
Eucgr.J02331 Eucalyptus grandis HOM05D005888 ORTHO05D007791 1.1e-35 155.2 446 30.9
Potri.001G331900 Populus trichocarpa HOM05D005888 ORTHO05D007791 1.1e-35 155.2 448 30.8
Actinidia05914 Actinidia chinensis HOM05D005888 ORTHO05D007791 3.2e-35 153.7 458 30.6
Solyc03g005010.4 Solanum lycopersicum HOM05D005888 ORTHO05D007791 3.2e-35 153.7 444 30.9
SalBow7G4553 Salvia bowleyana HOM05D005888 ORTHO05D007791 4.2e-35 153.3 487 31.0
Pp3c10_19430 Physcomitrium patens HOM05D005888 ORTHO05D007791 9.4e-35 152.1 468 31.6
TWI36G1634 Tripterygium wilfordii HOM05D005888 ORTHO05D007791 9.4e-35 152.1 458 30.1
Gohir.A10G159400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.6e-34 151.4 452 30.8
Gorai.011G091800 Gossypium raimondii HOM05D005888 ORTHO05D007791 1.6e-34 151.4 452 31.2
Thecc.04G034400 Theobroma cacao HOM05D005888 ORTHO05D007791 1.6e-34 151.4 451 31.0
MD09G1012500 Malus domestica HOM05D005888 ORTHO05D007791 2.1e-34 151.0 451 31.3
Phvul.001G094800 Phaseolus vulgaris HOM05D005888 ORTHO05D007791 2.1e-34 151.0 450 30.4
Sopen03g001020 Solanum pennellii HOM05D005888 ORTHO05D007791 2.1e-34 151.0 444 30.6
Sed0023439 Sechium edule HOM05D005888 ORTHO05D007791 2.7e-34 150.6 448 30.8
Lj1g0026523 Lotus japonicus HOM05D005888 ORTHO05D007791 3.6e-34 150.2 448 29.7
ECA238G1812 Erigeron canadensis HOM05D005888 ORTHO05D001226 7.9e-34 149.1 449 30.1
Manes.15G159600 Manihot esculenta HOM05D005888 ORTHO05D007791 7.9e-34 149.1 447 29.8
Aqoxy5G03414 Aquilegia oxysepala HOM05D005888 ORTHO05D007791 1.0e-33 148.7 448 31.0
Ciclev10014957m.g Citrus clementina HOM05D005888 ORTHO05D007791 1.4e-33 148.3 447 29.3
QL02p071659 Quercus lobata HOM05D005888 ORTHO05D007791 1.4e-33 148.3 433 30.5
RcHm_v2.0_Chr2g0175381 Rosa chinensis HOM05D005888 ORTHO05D007791 1.4e-33 148.3 450 29.6
MSTRG.15566 Avicennia marina HOM05D005888 ORTHO05D007791 1.8e-33 147.9 463 30.0
MELO3C014874.2 Cucumis melo HOM05D005888 ORTHO05D007791 2.3e-33 147.5 450 30.0
FvH4_6g53250 Fragaria vesca HOM05D005888 ORTHO05D007791 2.3e-33 147.5 463 29.4
Sc03g0006610 Simmondsia chinensis HOM05D005888 ORTHO05D007791 2.3e-33 147.5 446 30.3
ClCG05G013410 Citrullus lanatus HOM05D005888 ORTHO05D007791 3.0e-33 147.1 461 29.1
CsaV3_3G027150 Cucumis sativus L. HOM05D005888 ORTHO05D007791 3.0e-33 147.1 450 29.8
Dinv33348 Davidia involucrata HOM05D005888 ORTHO05D007791 3.0e-33 147.1 449 29.8
TPR.G38314 Trifolium pratense HOM05D005888 ORTHO05D007791 3.0e-33 147.1 448 29.5
arahy.Tifrunner.gnm1.ann1.BEVL6N Arachis hypogaea HOM05D005888 ORTHO05D007791 3.9e-33 146.7 451 30.4
Lalb_Chr22g0360441 Lupinus albus HOM05D005888 ORTHO05D007791 3.9e-33 146.7 447 29.8
Medtr7g029350 Medicago truncatula HOM05D005888 ORTHO05D007791 3.9e-33 146.7 449 29.0
SMO364G0044 Selaginella moellendorffii HOM05D005888 ORTHO05D007791 5.1e-33 146.4 434 31.1
Migut.K01458 Erythranthe guttata HOM05D005888 ORTHO05D007791 6.7e-33 146.0 464 30.0
arahy.Tifrunner.gnm1.ann1.269ICV Arachis hypogaea HOM05D005888 ORTHO05D007791 1.1e-32 145.2 451 30.4
Atru.chr6.2554 Acer truncatum HOM05D005888 ORTHO05D007791 1.5e-32 144.8 453 30.0
CiPaw.03G054300 Carya illinoinensis HOM05D005888 ORTHO05D007791 1.5e-32 144.8 416 30.5
Atru.chr6.2546 Acer truncatum HOM05D005888 ORTHO05D007791 2.0e-32 144.4 453 29.8
DCAR_021782 Daucus carota HOM05D005888 ORTHO05D007791 4.4e-32 143.3 440 30.2
THA.LOC104823976 Tarenaya hassleriana HOM05D005888 ORTHO05D007791 4.4e-32 143.3 454 29.5
CANSAT64G1138 Cannabis sativa HOM05D005888 ORTHO05D007791 5.7e-32 142.9 461 29.9
Psat3g164600 Pisum sativum HOM05D005888 ORTHO05D007791 5.7e-32 142.9 452 29.4
Lsat_1_v5_gn_2_94140 Lactuca sativa HOM05D005888 ORTHO05D007791 7.4e-32 142.5 447 29.1
Gohir.D10G084400 Gossypium hirsutum HOM05D005888 ORTHO05D007791 1.3e-31 141.7 452 31.0
PGR083G0577 Punica granatum HOM05D005888 ORTHO05D007791 1.3e-31 141.7 434 28.8
PGSC0003DMG400013424 Solanum tuberosum HOM05D005888 ORTHO05D007791 2.2e-31 141.0 437 29.7
Nn4g22357 Nelumbo nucifera HOM05D005888 ORTHO05D007791 2.8e-31 140.6 451 30.4
PSO063G1934 Papaver somniferum HOM05D005888 ORTHO05D007791 2.8e-31 140.6 448 29.9
PSO782G2046 Papaver somniferum HOM05D005888 ORTHO05D007791 2.8e-31 140.6 448 29.9
Lju41C52T2 Lonicera japonica HOM05D005888 ORTHO05D007791 3.7e-31 140.2 442 29.4
Sp2g16300 Schrenkiella parvula HOM05D005888 ORTHO05D007791 3.7e-31 140.2 448 29.0
Cpa.g.sc171.27 Carica papaya HOM05D005888 ORTHO05D007791 4.8e-31 139.8 445 29.0
Mapoly0035s0136 Marchantia polymorpha HOM05D005888 ORTHO05D007791 6.3e-31 139.4 417 30.0
Sabra16G0212900 Salix brachista HOM05D005888 ORTHO05D007791 1.4e-30 138.3 439 31.0
AL5G16294 Arabidopsis lyrata HOM05D005888 ORTHO05D007791 1.8e-30 137.9 454 29.3
Hma1.2p1_0279F.1_g112650 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 1.8e-30 137.9 424 28.8
Carub.0005s0545 Capsella rubella HOM05D005888 ORTHO05D007791 2.4e-30 137.5 454 29.3
Cc07_g00720 Coffea canephora HOM05D005888 ORTHO05D007791 2.4e-30 137.5 424 29.0
GSVIVG01033109001 Vitis vinifera HOM05D005888 ORTHO05D007791 2.4e-30 137.5 450 30.2
AT3G27180 Arabidopsis thaliana HOM05D005888 ORTHO05D007791 4.1e-30 136.7 454 29.3
C07p36200 Brassica napus HOM05D005888 ORTHO05D007791 4.1e-30 136.7 456 28.7
BraA06t27070Z Brassica rapa HOM05D005888 ORTHO05D007791 9.1e-30 135.6 452 29.0
CARHR148380 Cardamine hirsuta HOM05D005888 ORTHO05D007791 9.1e-30 135.6 454 28.9
A06p41440 Brassica napus HOM05D005888 ORTHO05D007791 1.5e-29 134.8 452 29.0
BolC7t44136H Brassica oleracea HOM05D005888 ORTHO05D007791 1.5e-29 134.8 458 28.8
Aa31LG2G5450 Aethionema arabicum HOM05D005888 ORTHO05D007791 2.6e-29 134.0 448 28.6
EL10Ac5g11325 Beta vulgaris HOM05D005888 ORTHO05D007791 7.7e-29 132.5 437 28.4
Nitab4.5_0000559g0440 Nicotiana tabacum HOM05D005888 ORTHO05D007791 2.2e-28 131.0 452 31.0
ATR0561G016 Amborella trichopoda HOM05D005888 ORTHO05D007791 2.9e-28 130.6 432 27.5
Zm00001eb364480 Zea mays HOM05D005888 ORTHO05D007791 3.8e-28 130.2 431 27.1
HanXRQChr14g0450691 Helianthus annuus HOM05D005888 ORTHO05D007791 1.5e-27 128.3 449 29.0
CDE05G3258 Ceratophyllum demersum HOM05D005888 ORTHO05D007791 1.9e-27 127.9 443 26.0
HPP92_006968 Vanilla planifolia HOM05D005888 ORTHO05D007791 5.5e-27 126.3 426 27.7
Cfa007240 Carpinus fangiana HOM05D005888 ORTHO05D007791 7.2e-27 125.9 425 29.9
Oeu011755.2 Olea europaea HOM05D005888 ORTHO05D007791 1.6e-26 124.8 461 28.0
FAN02G1540 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.1e-26 124.4 483 27.5
CAN.G1751.4 Capsicum annuum HOM05D005888 ORTHO05D007791 6.1e-26 122.9 321 32.1
Rhsim10G0007200 Rhododendron simsii HOM05D005888 ORTHO05D007791 6.1e-26 122.9 489 27.2
Thhalv10003965m.g Eutrema salsugineum HOM05D005888 ORTHO05D007791 8.0e-26 122.5 477 27.3
COL.COLO4_17186 Corchorus olitorius HOM05D005888 ORTHO05D007791 1.0e-25 122.1 341 31.7
Peaxi162Scf00700g00115 Petunia axillaris HOM05D005888 ORTHO05D007791 1.4e-25 121.7 442 28.3
FAN05G3931 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.3e-25 120.9 456 27.2
FAN14G3555 Fragaria x ananassa HOM05D005888 ORTHO05D007791 3.9e-25 120.2 463 27.0
BcaC06g33851 Brassica carinata HOM05D005888 ORTHO05D007791 8.8e-25 119.0 454 27.8
TAR374G0091 Trochodendron aralioides HOM05D005888 ORTHO05D007791 3.3e-24 117.1 325 31.7
SGA_v2.0_scaffold47G17585 Striga asiatica HOM05D005888 ORTHO05D000781 2.8e-23 114.0 388 30.7
Hma1.2p1_0279F.1_g112640 Hydrangea macrophylla HOM05D005888 ORTHO05D007791 7.0e-22 109.4 314 29.6
CBR_g38076 Chara braunii HOM05D005888 ORTHO05D007791 9.1e-22 109.0 320 30.6
FAN05G4989 Fragaria x ananassa HOM05D005888 ORTHO05D007791 2.6e-21 107.5 347 28.8
AUR62034780 Chenopodium quinoa HOM05D005888 ORTHO05D007791 7.7e-21 105.9 445 27.4
Os01g0920300 Oryza sativa ssp. japonica HOM05D005888 ORTHO05D007791 7.7e-21 105.9 323 29.4
AagrBONN_evm.TU.Sc2ySwM_344.2002 Anthoceros agrestis HOM05D005888 ORTHO05D007791 8.5e-20 102.4 370 28.6
Nitab4.5_0005161g0030 Nicotiana tabacum HOM05D005888 ORTHO05D007791 1.2e-18 98.6 446 27.1
vmacro05950 Vaccinium macrocarpon HOM05D005888 ORTHO05D007791 1.2e-18 98.6 463 25.7
Ca_11801_v3 Cicer arietinum L. HOM05D005888 ORTHO05D007791 3.0e-17 94.0 285 30.2
Actinidia36191 Actinidia chinensis HOM05D005888 ORTHO05D007791 1.5e-16 91.7 294 28.2
VMungo1383G0786 Vigna mungo HOM05D005888 ORTHO05D007791 7.0e-14 82.8 188 35.6
Duzib187G0894 Durio zibethinus HOM05D005888 ORTHO05D007791 1.6e-13 81.6 443 24.8
AUR62009505 Chenopodium quinoa HOM05D005888 ORTHO05D007791 1.9e-11 74.7 214 30.8
Haze_14860 Corylus avellana HOM05D005888 ORTHO05D007791 3.2e-11 73.9 400 25.2
VMungo1383G0859 Vigna mungo HOM05D005888 ORTHO05D007791 5.5e-11 73.2 231 27.7
AUR62044347 Chenopodium quinoa HOM05D005888 ORTHO05D007791 2.1e-10 71.2 163 36.2
BcaC06g31013 Brassica carinata HOM05D005888 ORTHO05D007791 6.1e-10 69.7 213 29.6
Ah.11g046710 Amaranthus hybridus HOM05D005888 ORTHO05D007791 1.0e-09 68.9 211 29.4
Cre13.g578012 Chlamydomonas reinhardtii HOM05D005888 ORTHO05D007791 9.8e-08 62.4 140 36.4


User provided reference genes

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