Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00001762 Prasinoderma coloniale HOM05D006094 ORTHO05D007761 8.8e-79 297.0 159 100.0
Nitab4.5_0006304g0020 Nicotiana tabacum HOM05D006094 ORTHO05D007761 2.7e-27 125.9 124 57.3
Sopen07g032100 Solanum pennellii HOM05D006094 ORTHO05D007761 2.7e-27 125.9 124 57.3
Nitab4.5_0000552g0050 Nicotiana tabacum HOM05D006094 ORTHO05D007761 3.5e-27 125.6 137 52.6
Solyc07g063960.3 Solanum lycopersicum HOM05D006094 ORTHO05D007761 3.5e-27 125.6 124 56.5
PGSC0003DMG400019266 Solanum tuberosum HOM05D006094 ORTHO05D007761 7.8e-27 124.4 124 56.5
Peaxi162Scf01086g00024 Petunia axillaris HOM05D006094 ORTHO05D007761 1.3e-26 123.6 124 55.6
Migut.H01870 Erythranthe guttata HOM05D006094 ORTHO05D007761 2.3e-26 122.9 152 47.4
Manes.03G121040 Manihot esculenta HOM05D006094 ORTHO05D007761 2.3e-26 122.9 124 56.5
Nitab4.5_0002229g0050 Nicotiana tabacum HOM05D006094 ORTHO05D007761 2.3e-26 122.9 124 55.6
Cre16.g652550 Chlamydomonas reinhardtii HOM05D006094 ORTHO05D007761 3.0e-26 122.5 111 55.9
Nitab4.5_0002342g0150 Nicotiana tabacum HOM05D006094 ORTHO05D007761 3.0e-26 122.5 124 54.8
CAN.G1110.18 Capsicum annuum HOM05D006094 ORTHO05D007761 5.1e-26 121.7 139 50.4
Lsat_1_v5_gn_9_94980 Lactuca sativa HOM05D006094 ORTHO05D007761 8.6e-26 120.9 124 51.6
Mapoly0006s0262 Marchantia polymorpha HOM05D006094 ORTHO05D007761 8.6e-26 120.9 139 52.5
Pp3c15_17530 Physcomitrium patens HOM05D006094 ORTHO05D007761 8.6e-26 120.9 137 52.6
Pp3c9_9200 Physcomitrium patens HOM05D006094 ORTHO05D007761 8.6e-26 120.9 138 52.9
CANSAT11G1866 Cannabis sativa HOM05D006094 ORTHO05D007761 1.1e-25 120.6 123 53.7
HanXRQChr03g0076231 Helianthus annuus HOM05D006094 ORTHO05D007761 1.5e-25 120.2 124 51.6
COL.COLO4_09549 Corchorus olitorius HOM05D006094 ORTHO05D007761 1.9e-25 119.8 141 48.9
Lj1A861T62 Lonicera japonica HOM05D006094 ORTHO05D007761 1.9e-25 119.8 124 53.2
PGSC0003DMG400025013 Solanum tuberosum HOM05D006094 ORTHO05D007761 1.9e-25 119.8 124 53.2
TPR.G36823 Trifolium pratense HOM05D006094 ORTHO05D007761 1.9e-25 119.8 148 48.0
ATR1088G047 Amborella trichopoda HOM05D006094 ORTHO05D007761 3.3e-25 119.0 124 50.8
Dinv22319 Davidia involucrata HOM05D006094 ORTHO05D007761 3.3e-25 119.0 125 52.8
Carub.0008s1487 Capsella rubella HOM05D006094 ORTHO05D007761 4.3e-25 118.6 112 56.2
Cpa.g.sc97.91 Carica papaya HOM05D006094 ORTHO05D007761 4.3e-25 118.6 139 50.4
CiPaw.11G182300 Carya illinoinensis HOM05D006094 ORTHO05D007761 4.3e-25 118.6 137 52.6
Ca_01774_v3 Cicer arietinum L. HOM05D006094 ORTHO05D007761 4.3e-25 118.6 148 46.6
SGA_v2.0_scaffold9G05013 Striga asiatica HOM05D006094 ORTHO05D007761 4.3e-25 118.6 148 47.3
DCAR_012725 Daucus carota HOM05D006094 ORTHO05D007761 5.6e-25 118.2 149 46.3
Nn1g06934 Nelumbo nucifera HOM05D006094 ORTHO05D007761 5.6e-25 118.2 125 52.8
Sp6g16570 Schrenkiella parvula HOM05D006094 ORTHO05D007761 5.6e-25 118.2 128 52.3
C09p44940 Brassica napus HOM05D006094 ORTHO05D007761 7.3e-25 117.9 125 53.6
BcaC03g14300 Brassica carinata HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
BcaC04g20323 Brassica carinata HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
A02p10140 Brassica napus HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
A10p11820 Brassica napus HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
C02p16840 Brassica napus HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
BolC2t07786H Brassica oleracea HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
BolC9t57371H Brassica oleracea HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
BraA02t06085Z Brassica rapa HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
BraA10t43280Z Brassica rapa HOM05D006094 ORTHO05D007761 9.6e-25 117.5 125 52.8
Duzib213G0969 Durio zibethinus HOM05D006094 ORTHO05D007761 9.6e-25 117.5 141 46.8
BcaB05g22149 Brassica carinata HOM05D006094 ORTHO05D007761 1.2e-24 117.1 128 51.6
Psat5g249200 Pisum sativum HOM05D006094 ORTHO05D007761 1.2e-24 117.1 132 49.2
RhsimUnG0254000 Rhododendron simsii HOM05D006094 ORTHO05D007761 1.2e-24 117.1 141 46.8
GSVIVG01014572001 Vitis vinifera HOM05D006094 ORTHO05D007761 1.2e-24 117.1 112 57.1
AL8G30060 Arabidopsis lyrata HOM05D006094 ORTHO05D007761 1.6e-24 116.7 125 52.8
AT5G54600 Arabidopsis thaliana HOM05D006094 ORTHO05D007761 1.6e-24 116.7 125 52.8
Thhalv10014723m.g Eutrema salsugineum HOM05D006094 ORTHO05D007761 1.6e-24 116.7 125 52.0
PSO832G4295 Papaver somniferum HOM05D006094 ORTHO05D007761 1.6e-24 116.7 128 49.2
QL08p014044 Quercus lobata HOM05D006094 ORTHO05D007761 1.6e-24 116.7 124 53.2
Sed0023243 Sechium edule HOM05D006094 ORTHO05D007761 1.6e-24 116.7 148 47.3
Sc03g0009180 Simmondsia chinensis HOM05D006094 ORTHO05D007761 1.6e-24 116.7 112 54.5
MSTRG.12948 Avicennia marina HOM05D006094 ORTHO05D007761 2.1e-24 116.3 124 51.6
CARHR267890 Cardamine hirsuta HOM05D006094 ORTHO05D007761 2.1e-24 116.3 125 52.0
Gohir.A01G073000 Gossypium hirsutum HOM05D006094 ORTHO05D007761 2.1e-24 116.3 141 48.2
Gohir.D01G059600 Gossypium hirsutum HOM05D006094 ORTHO05D007761 2.1e-24 116.3 141 48.2
Gorai.002G080800 Gossypium raimondii HOM05D006094 ORTHO05D007761 2.1e-24 116.3 141 48.2
Medtr2g082410 Medicago truncatula HOM05D006094 ORTHO05D007761 2.1e-24 116.3 148 46.6
Potri.001G415400 Populus trichocarpa HOM05D006094 ORTHO05D007761 2.1e-24 116.3 125 51.2
Sabra16G0282000 Salix brachista HOM05D006094 ORTHO05D007761 2.1e-24 116.3 125 52.0
MELO3C031870.2 Cucumis melo HOM05D006094 ORTHO05D007761 2.8e-24 115.9 154 48.7
PGR031G3561 Punica granatum HOM05D006094 ORTHO05D007761 2.8e-24 115.9 110 57.3
THA.LOC104809288 Tarenaya hassleriana HOM05D006094 ORTHO05D007761 2.8e-24 115.9 128 49.2
Hma1.2p1_1054F.1_g252540 Hydrangea macrophylla HOM05D006094 ORTHO05D007761 3.6e-24 115.5 137 48.9
PSO210G7521 Papaver somniferum HOM05D006094 ORTHO05D007761 3.6e-24 115.5 128 48.4
SalBow7G2145 Salvia bowleyana HOM05D006094 ORTHO05D007761 3.6e-24 115.5 130 53.8
CBR_g8903 Chara braunii HOM05D006094 ORTHO05D007761 4.7e-24 115.2 156 45.5
ClCG10G006290 Citrullus lanatus HOM05D006094 ORTHO05D007761 4.7e-24 115.2 150 47.3
HPP92_013305 Vanilla planifolia HOM05D006094 ORTHO05D007761 4.7e-24 115.2 153 45.1
Aa31LG3G10550 Aethionema arabicum HOM05D006094 ORTHO05D007761 6.2e-24 114.8 112 53.6
Ah.16g106570 Amaranthus hybridus HOM05D006094 ORTHO05D007761 6.2e-24 114.8 128 49.2
Glyma.12G215900 Glycine max HOM05D006094 ORTHO05D007761 6.2e-24 114.8 128 50.0
Thecc.07G056100 Theobroma cacao HOM05D006094 ORTHO05D007761 6.2e-24 114.8 141 47.5
arahy.Tifrunner.gnm1.ann1.WIG9V3 Arachis hypogaea HOM05D006094 ORTHO05D007761 8.1e-24 114.4 137 47.4
Rhsim02G0093900 Rhododendron simsii HOM05D006094 ORTHO05D007761 8.1e-24 114.4 133 48.1
TAR627G0546 Trochodendron aralioides HOM05D006094 ORTHO05D007761 8.1e-24 114.4 124 50.0
arahy.Tifrunner.gnm1.ann1.KVK1VL Arachis hypogaea HOM05D006094 ORTHO05D007761 1.1e-23 114.0 137 47.4
Glyma.13G285600 Glycine max HOM05D006094 ORTHO05D007761 1.1e-23 114.0 128 49.2
TWI39G1263 Tripterygium wilfordii HOM05D006094 ORTHO05D007761 1.1e-23 114.0 154 45.5
Atru.chr2.3143 Acer truncatum HOM05D006094 ORTHO05D007761 1.4e-23 113.6 141 46.8
EL10Ac4g07994 Beta vulgaris HOM05D006094 ORTHO05D007761 1.4e-23 113.6 110 53.6
Ciclev10009584m.g Citrus clementina HOM05D006094 ORTHO05D007761 1.4e-23 113.6 125 53.6
Aqoxy1G03827 Aquilegia oxysepala HOM05D006094 ORTHO05D007761 1.8e-23 113.2 112 53.6
Cc05_g13100 Coffea canephora HOM05D006094 ORTHO05D007761 1.8e-23 113.2 128 49.2
FAN16G1255 Fragaria x ananassa HOM05D006094 ORTHO05D007761 1.8e-23 113.2 142 45.8
FAN25G1510 Fragaria x ananassa HOM05D006094 ORTHO05D007761 1.8e-23 113.2 124 50.0
unitig_0.g2378 Utricularia gibba HOM05D006094 ORTHO05D007761 1.8e-23 113.2 136 50.7
Haze_09585 Corylus avellana HOM05D006094 ORTHO05D007761 2.4e-23 112.8 137 48.2
Eucgr.F03416 Eucalyptus grandis HOM05D006094 ORTHO05D007761 2.4e-23 112.8 130 49.2
FvH4_3g21600 Fragaria vesca HOM05D006094 ORTHO05D007761 3.1e-23 112.5 142 45.8
FAN11G0194 Fragaria x ananassa HOM05D006094 ORTHO05D007761 3.1e-23 112.5 142 45.8
Lj3g0006112 Lotus japonicus HOM05D006094 ORTHO05D007761 3.1e-23 112.5 132 47.7
Prupe.4G200400 Prunus persica HOM05D006094 ORTHO05D007761 3.1e-23 112.5 137 47.4
Cfa020459 Carpinus fangiana HOM05D006094 ORTHO05D007761 4.0e-23 112.1 137 48.2
Lalb_Chr14g0366021 Lupinus albus HOM05D006094 ORTHO05D007761 4.0e-23 112.1 137 47.4
MD11G1229300 Malus domestica HOM05D006094 ORTHO05D007761 4.0e-23 112.1 146 46.6
RcHm_v2.0_Chr5g0037061 Rosa chinensis HOM05D006094 ORTHO05D007761 4.0e-23 112.1 137 46.0
TWI38G1667 Tripterygium wilfordii HOM05D006094 ORTHO05D007761 4.0e-23 112.1 154 45.5
VMungo1080G1399 Vigna mungo HOM05D006094 ORTHO05D007761 5.2e-23 111.7 137 46.0
CDE05G2809 Ceratophyllum demersum HOM05D006094 ORTHO05D007761 6.8e-23 111.3 132 47.7
MBI19_g03677_MAGBIO Magnolia biondii HOM05D006094 ORTHO05D007761 6.8e-23 111.3 138 46.4
MD03G1214300 Malus domestica HOM05D006094 ORTHO05D007761 8.9e-23 110.9 137 47.4
Hund02149 Selenicereus undatus HOM05D006094 ORTHO05D007761 8.9e-23 110.9 125 48.8
Actinidia35309 Actinidia chinensis HOM05D006094 ORTHO05D007761 1.2e-22 110.5 144 45.1
SEGI_26346 Sequoiadendron giganteum HOM05D006094 ORTHO05D007761 2.6e-22 109.4 113 50.4
CDE02G2884 Ceratophyllum demersum HOM05D006094 ORTHO05D007761 4.4e-22 108.6 146 44.5
AUR62029246 Chenopodium quinoa HOM05D006094 ORTHO05D007761 4.4e-22 108.6 123 49.6
AUR62034219 Chenopodium quinoa HOM05D006094 ORTHO05D007761 4.4e-22 108.6 123 49.6
Phvul.005G090100 Phaseolus vulgaris HOM05D006094 ORTHO05D007761 4.4e-22 108.6 149 45.0
Actinidia10699 Actinidia chinensis HOM05D006094 ORTHO05D007761 7.6e-22 107.8 141 44.7
MCO02G437 Micromonas commoda HOM05D006094 ORTHO05D007761 9.9e-22 107.5 138 49.3
vmacro22727 Vaccinium macrocarpon HOM05D006094 ORTHO05D007761 2.9e-21 105.9 151 43.7
vmacro22759 Vaccinium macrocarpon HOM05D006094 ORTHO05D007761 2.9e-21 105.9 151 43.7
ECA240G4288 Erigeron canadensis HOM05D000089 ORTHO05D007761 8.4e-21 104.4 139 43.9
BcaB08g35821 Brassica carinata HOM05D006094 ORTHO05D007761 1.9e-20 103.2 128 50.0
A03p14540 Brassica napus HOM05D006094 ORTHO05D007761 2.4e-20 102.8 115 51.3
Os06g0683200 Oryza sativa ssp. japonica HOM05D006094 ORTHO05D007761 1.2e-19 100.5 156 44.2
SMO356G0620 Selaginella moellendorffii HOM05D006094 ORTHO05D007761 1.2e-19 100.5 102 51.0
FAN21G3550 Fragaria x ananassa HOM05D006094 ORTHO05D007761 3.5e-19 99.0 119 46.2
Zm00001eb225380 Zea mays HOM05D006094 ORTHO05D007761 1.3e-18 97.1 142 43.0
Cfa021143 Carpinus fangiana HOM05D006032 ORTHO05D001488 2.0e-06 56.6 82 36.6
ECA248G3453 Erigeron canadensis HOM05D004691 ORTHO05D005552 7.6e-06 54.7 97 34.0
Lsat_1_v5_gn_5_187201 Lactuca sativa HOM05D004691 ORTHO05D005552 7.6e-06 54.7 91 35.2
Mapoly0064s0052 Marchantia polymorpha HOM05D004691 ORTHO05D005552 7.6e-06 54.7 91 39.6


User provided reference genes

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