Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 0.0e+00 1362.8 773 100.0
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 1.1e-46 192.6 833 26.1
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 4.8e-45 187.2 780 26.2
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 1.4e-44 185.7 777 25.5
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 3.1e-36 157.9 522 28.9
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 6.1e-32 143.7 822 29.3
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 2.5e-30 138.3 684 26.2
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 6.3e-29 133.7 549 26.8
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.4e-28 132.5 533 27.4
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 3.1e-28 131.3 555 26.3
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 5.3e-28 130.6 549 26.6
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 6.9e-28 130.2 532 28.6
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 6.9e-28 130.2 783 23.9
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 6.9e-28 130.2 360 31.9
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 2.0e-27 128.6 557 26.4
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 3.4e-27 127.9 540 26.9
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 3.4e-27 127.9 536 28.0
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 3.4e-27 127.9 526 28.1
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 4.5e-27 127.5 540 26.9
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 4.5e-27 127.5 526 28.1
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 4.5e-27 127.5 549 26.2
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 4.5e-27 127.5 568 26.6
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 5.9e-27 127.1 528 27.8
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 1.0e-26 126.3 562 26.5
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 1.7e-26 125.6 542 26.9
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 1.7e-26 125.6 542 26.9
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 1.7e-26 125.6 557 26.6
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.2e-26 125.2 531 27.5
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 2.9e-26 124.8 539 26.7
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 2.9e-26 124.8 526 27.0
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 3.8e-26 124.4 513 27.1
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 3.8e-26 124.4 525 27.8
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 6.5e-26 123.6 535 26.5
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 8.5e-26 123.2 540 26.3
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 8.5e-26 123.2 539 26.5
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.1e-25 122.9 531 27.3
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 1.4e-25 122.5 344 31.7
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 2.5e-25 121.7 569 25.5
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 2.5e-25 121.7 539 26.5
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 5.5e-25 120.6 536 27.1
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 7.2e-25 120.2 527 26.8
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 7.2e-25 120.2 554 25.8
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 9.4e-25 119.8 548 25.9
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 1.2e-24 119.4 544 27.0
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 1.2e-24 119.4 520 26.9
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.6e-24 119.0 556 25.7
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 1.6e-24 119.0 541 26.1
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 1.6e-24 119.0 529 26.1
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 2.7e-24 118.2 539 27.5
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 2.7e-24 118.2 543 26.0
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 3.6e-24 117.9 569 24.8
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 3.6e-24 117.9 543 26.3
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 3.6e-24 117.9 559 25.6
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 3.6e-24 117.9 559 26.1
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 4.6e-24 117.5 551 25.2
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 6.1e-24 117.1 535 25.8
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 6.1e-24 117.1 535 25.8
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.0e-23 116.3 536 28.4
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 1.0e-23 116.3 471 27.0
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 1.4e-23 115.9 545 25.9
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 1.4e-23 115.9 536 25.7
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 1.4e-23 115.9 530 27.2
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 1.8e-23 115.5 350 28.0
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 2.3e-23 115.2 339 29.5
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 2.3e-23 115.2 531 25.6
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 3.0e-23 114.8 344 28.8
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 3.0e-23 114.8 522 26.6
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 3.9e-23 114.4 545 26.4
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 6.7e-23 113.6 540 25.4
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 6.7e-23 113.6 547 25.6
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 6.7e-23 113.6 575 25.6
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 8.8e-23 113.2 545 26.1
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 2.0e-22 112.1 533 26.5
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 2.5e-22 111.7 563 24.5
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 2.5e-22 111.7 518 25.9
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 2.5e-22 111.7 556 26.3
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 4.3e-22 110.9 535 26.0
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 4.3e-22 110.9 536 25.2
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 7.4e-22 110.2 542 25.5
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 7.4e-22 110.2 559 25.6
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 1.7e-21 109.0 539 24.7
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 2.2e-21 108.6 526 26.8
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 2.8e-21 108.2 553 25.7
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 2.8e-21 108.2 547 25.0
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 3.7e-21 107.8 526 26.0
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 4.8e-21 107.5 539 25.4
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.8e-21 107.5 526 26.8
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 8.2e-21 106.7 528 26.1
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 1.1e-20 106.3 517 25.3
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 1.4e-20 105.9 564 25.5
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.4e-20 105.9 526 26.4
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.4e-20 105.9 525 26.3
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 1.8e-20 105.5 748 24.9
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 3.1e-20 104.8 531 25.2
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 5.3e-20 104.0 574 25.4
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.5e-19 102.4 361 27.1
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 1.9e-17 95.5 358 27.4
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 4.2e-17 94.4 169 36.1
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 7.9e-16 90.1 469 25.8
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 1.3e-13 82.8 169 34.3
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 3.7e-13 81.3 153 34.6
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 3.1e-12 78.2 344 27.0
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 9.1e-12 76.6 350 25.4
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 7.7e-11 73.6 441 25.6
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 3.8e-10 71.2 445 24.0
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 1.9e-09 68.9 343 27.1
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 2.5e-09 68.6 198 30.8
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 6.7e-07 60.5 536 24.6


User provided reference genes

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