Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 4.4e-116 421.4 225 100.0
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 3.8e-19 99.4 132 43.2
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 1.6e-17 94.0 201 36.3
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 3.6e-17 92.8 158 38.6
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 3.9e-16 89.4 175 34.3
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 8.8e-16 88.2 168 33.9
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.1e-15 87.8 143 40.6
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 3.3e-15 86.3 135 41.5
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 4.4e-15 85.9 140 39.3
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 4.4e-15 85.9 141 39.0
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 4.4e-15 85.9 143 39.9
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 5.7e-15 85.5 143 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 5.7e-15 85.5 167 35.9
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 7.4e-15 85.1 144 39.6
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 7.4e-15 85.1 140 38.6
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 7.4e-15 85.1 135 40.0
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 9.7e-15 84.7 143 37.8
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.3e-14 84.3 135 38.5
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 1.7e-14 84.0 144 37.5
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.7e-14 84.0 141 39.0
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.7e-14 84.0 135 40.0
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 2.2e-14 83.6 145 35.2
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 2.2e-14 83.6 146 35.6
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 2.8e-14 83.2 145 35.2
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 2.8e-14 83.2 141 37.6
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 3.7e-14 82.8 140 37.9
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 3.7e-14 82.8 163 35.0
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 4.8e-14 82.4 106 43.4
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 6.3e-14 82.0 140 37.9
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 6.3e-14 82.0 136 38.2
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 8.2e-14 81.6 141 36.2
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 8.2e-14 81.6 158 35.4
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 1.1e-13 81.3 146 36.3
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 1.1e-13 81.3 148 37.2
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 1.1e-13 81.3 153 35.9
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.4e-13 80.9 135 38.5
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.8e-13 80.5 106 43.4
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 1.8e-13 80.5 135 36.3
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 1.8e-13 80.5 109 45.0
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 2.4e-13 80.1 169 33.1
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 3.1e-13 79.7 142 35.9
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.1e-13 79.3 142 36.6
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 4.1e-13 79.3 152 35.5
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 4.1e-13 79.3 135 37.8
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 4.1e-13 79.3 135 37.0
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 5.3e-13 79.0 135 37.8
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.3e-13 79.0 135 37.8
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 5.3e-13 79.0 229 32.3
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 7.0e-13 78.6 150 36.7
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 9.1e-13 78.2 135 37.8
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 1.2e-12 77.8 135 37.0
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 1.2e-12 77.8 135 36.3
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.6e-12 77.4 134 37.3
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.6e-12 77.4 144 37.5
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 2.0e-12 77.0 140 36.4
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 2.0e-12 77.0 143 36.4
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 2.0e-12 77.0 143 36.4
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 2.0e-12 77.0 162 34.0
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 2.6e-12 76.6 139 36.7
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.6e-12 76.6 145 34.5
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 2.6e-12 76.6 155 35.5
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 3.5e-12 76.3 106 41.5
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.5e-12 76.3 121 40.5
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 3.5e-12 76.3 106 40.6
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 4.5e-12 75.9 128 35.9
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 5.9e-12 75.5 143 37.1
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 5.9e-12 75.5 136 36.0
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 7.7e-12 75.1 148 37.2
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 7.7e-12 75.1 138 35.5
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 1.0e-11 74.7 179 31.8
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 1.0e-11 74.7 109 40.4
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 1.0e-11 74.7 138 37.0
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 1.7e-11 73.9 144 36.8
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 1.7e-11 73.9 144 36.8
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 1.7e-11 73.9 108 40.7
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 1.7e-11 73.9 136 34.6
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-11 73.9 143 35.0
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-11 73.9 143 35.0
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 1.7e-11 73.9 146 34.9
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 2.2e-11 73.6 136 33.8
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 2.2e-11 73.6 143 35.0
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 2.2e-11 73.6 106 42.5
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 3.8e-11 72.8 144 36.1
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 3.8e-11 72.8 135 35.6
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 5.0e-11 72.4 144 36.1
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 5.0e-11 72.4 144 36.1
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 6.5e-11 72.0 106 41.5
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 8.5e-11 71.6 106 41.5
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 8.5e-11 71.6 144 36.8
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 8.5e-11 71.6 136 35.3
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 8.5e-11 71.6 174 35.1
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 8.5e-11 71.6 136 35.3
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.1e-10 71.2 144 37.5
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.5e-10 70.9 106 42.5
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 1.5e-10 70.9 144 36.1
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 1.9e-10 70.5 110 41.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 3.2e-10 69.7 109 39.4
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 9.4e-10 68.2 108 38.9
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 2.1e-09 67.0 169 30.2
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 3.6e-09 66.2 218 30.3
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.8e-08 63.9 98 38.8
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 3.0e-08 63.2 155 29.7
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.0e-08 62.8 144 34.7
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 3.3e-07 59.7 196 29.6
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 5.7e-07 58.9 93 37.6
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 5.7e-07 58.9 88 39.8
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.8e-06 56.6 140 31.4
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 2.8e-06 56.6 147 31.3
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 3.7e-06 56.2 166 28.3


User provided reference genes

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