Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00001314 Prasinoderma coloniale HOM05D007008 ORTHO05D008622 5.7e-55 217.2 103 100.0
MCO13G493 Micromonas commoda HOM05D007008 ORTHO05D008622 3.4e-31 138.3 102 60.8
Eucgr.C04041 Eucalyptus grandis HOM05D007008 ORTHO05D008622 6.4e-30 134.0 100 60.0
Rhsim02G0211800 Rhododendron simsii HOM05D007008 ORTHO05D008622 1.4e-29 132.9 99 58.6
CiPaw.08G005100 Carya illinoinensis HOM05D007008 ORTHO05D008622 4.1e-29 131.3 99 56.6
Mapoly0112s0015 Marchantia polymorpha HOM05D007008 ORTHO05D008622 7.1e-29 130.6 100 57.0
Nn2g14020 Nelumbo nucifera HOM05D007008 ORTHO05D008622 9.2e-29 130.2 99 56.6
TWI34G0293 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 9.2e-29 130.2 99 57.6
CDE05G1515 Ceratophyllum demersum HOM05D007008 ORTHO05D008622 1.2e-28 129.8 100 56.0
Gohir.A06G102300 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.2e-28 129.8 99 56.6
Gohir.D06G104200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.2e-28 129.8 99 56.6
THA.LOC104799029 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 2.7e-28 128.6 99 54.5
PGR044G1005 Punica granatum HOM05D007008 ORTHO05D008622 3.5e-28 128.3 100 57.0
QL02p018585 Quercus lobata HOM05D007008 ORTHO05D008622 3.5e-28 128.3 99 55.6
Thecc.09G014400 Theobroma cacao HOM05D007008 ORTHO05D008622 3.5e-28 128.3 99 54.5
arahy.Tifrunner.gnm1.ann1.ENRJ0V Arachis hypogaea HOM05D007008 ORTHO05D008622 4.6e-28 127.9 99 55.6
CAN.G906.10 Capsicum annuum HOM05D007008 ORTHO05D008622 4.6e-28 127.9 101 55.4
Eucgr.L00629 Eucalyptus grandis HOM05D007008 ORTHO05D008622 4.6e-28 127.9 111 55.0
Nn8g40044 Nelumbo nucifera HOM05D007008 ORTHO05D008622 4.6e-28 127.9 99 55.6
Solyc08g006700.3 Solanum lycopersicum HOM05D007008 ORTHO05D008622 4.6e-28 127.9 101 54.5
PGSC0003DMG400026283 Solanum tuberosum HOM05D007008 ORTHO05D008622 4.6e-28 127.9 101 54.5
Duzib187G1435 Durio zibethinus HOM05D007008 ORTHO05D008622 6.0e-28 127.5 99 53.5
Manes.03G007600 Manihot esculenta HOM05D007008 ORTHO05D008622 7.8e-28 127.1 100 54.0
Phvul.001G040900 Phaseolus vulgaris HOM05D007008 ORTHO05D008622 7.8e-28 127.1 99 54.5
Sed0015687 Sechium edule HOM05D007008 ORTHO05D008622 7.8e-28 127.1 100 53.0
MSTRG.13965 Avicennia marina HOM05D007008 ORTHO05D008622 1.0e-27 126.7 99 55.6
Glyma.17G224100 Glycine max HOM05D007008 ORTHO05D008622 1.0e-27 126.7 99 53.5
Duzib168G0569 Durio zibethinus HOM05D007008 ORTHO05D008622 1.3e-27 126.3 99 53.5
Glyma.06G060700 Glycine max HOM05D007008 ORTHO05D008622 1.3e-27 126.3 100 53.0
Aqoxy7G03348 Aquilegia oxysepala HOM05D007008 ORTHO05D008622 1.7e-27 125.9 99 54.5
Ciclev10009999m.g Citrus clementina HOM05D007008 ORTHO05D008622 1.7e-27 125.9 99 53.5
THA.LOC104824959 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 1.7e-27 125.9 99 54.5
EL10Ac2g02486 Beta vulgaris HOM05D007008 ORTHO05D008622 2.3e-27 125.6 100 54.0
CANSAT25G2981 Cannabis sativa HOM05D007008 ORTHO05D008622 2.3e-27 125.6 99 53.5
Atru.chr7.2552 Acer truncatum HOM05D007008 ORTHO05D008622 3.9e-27 124.8 99 53.5
AagrBONN_evm.TU.Sc2ySwM_344.3123 Anthoceros agrestis HOM05D007008 ORTHO05D008622 5.1e-27 124.4 101 54.5
Glyma.14G101000 Glycine max HOM05D007008 ORTHO05D008622 5.1e-27 124.4 99 53.5
Aa31LG3G16290 Aethionema arabicum HOM05D007008 ORTHO05D008622 6.6e-27 124.0 101 49.5
Duzib150G0558 Durio zibethinus HOM05D007008 ORTHO05D008622 6.6e-27 124.0 99 51.5
Carub.0006s0932 Capsella rubella HOM05D007008 ORTHO05D008622 8.6e-27 123.6 99 51.5
CARHR202480 Cardamine hirsuta HOM05D007008 ORTHO05D008622 8.6e-27 123.6 99 50.5
SGA_v2.0_scaffold4G02166 Striga asiatica HOM05D007008 ORTHO05D008622 8.6e-27 123.6 99 54.5
AUR62024793 Chenopodium quinoa HOM05D007008 ORTHO05D008622 1.1e-26 123.2 100 53.0
FAN15G2831 Fragaria x ananassa HOM05D000756 ORTHO05D008622 1.1e-26 123.2 99 54.5
FAN27G1693 Fragaria x ananassa HOM05D007008 ORTHO05D008622 1.1e-26 123.2 99 54.5
TWI32G0141 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 1.1e-26 123.2 99 52.5
Migut.A00362 Erythranthe guttata HOM05D007008 ORTHO05D008622 1.5e-26 122.9 100 52.0
FvH4_2g41220 Fragaria vesca HOM05D007008 ORTHO05D008622 1.5e-26 122.9 99 53.5
Manes.16G130900 Manihot esculenta HOM05D007008 ORTHO05D008622 1.5e-26 122.9 99 52.5
ECA240G3080 Erigeron canadensis HOM05D007008 ORTHO05D008622 1.9e-26 122.5 99 53.5
HanXRQChr17g0538991 Helianthus annuus HOM05D007008 ORTHO05D008622 1.9e-26 122.5 98 54.1
Pp3c15_19100 Physcomitrium patens HOM05D007008 ORTHO05D008622 1.9e-26 122.5 101 51.5
AT5G10810 Arabidopsis thaliana HOM05D007008 ORTHO05D008622 2.5e-26 122.1 99 50.5
MSTRG.11785 Avicennia marina HOM05D007008 ORTHO05D008622 2.5e-26 122.1 99 53.5
Glyma.04G060200 Glycine max HOM05D007008 ORTHO05D008622 2.5e-26 122.1 100 51.0
Lalb_Chr22g0361631 Lupinus albus HOM05D007008 ORTHO05D008622 2.5e-26 122.1 99 52.5
Prupe.1G395400 Prunus persica HOM05D007008 ORTHO05D008622 2.5e-26 122.1 99 52.5
TPR.G38860 Trifolium pratense HOM05D007008 ORTHO05D008622 2.5e-26 122.1 99 52.5
Medtr1g014230 Medicago truncatula HOM05D007008 ORTHO05D008622 3.3e-26 121.7 98 51.0
Sed0013935 Sechium edule HOM05D007008 ORTHO05D008622 3.3e-26 121.7 99 50.5
SGA_v2.0_scaffold169G38605 Striga asiatica HOM05D007008 ORTHO05D008622 3.3e-26 121.7 99 51.5
Pp3c9_4080 Physcomitrium patens HOM05D007008 ORTHO05D008622 4.3e-26 121.3 101 51.5
TAR383G0422 Trochodendron aralioides HOM05D007008 ORTHO05D008622 4.3e-26 121.3 99 52.5
AL6G21390 Arabidopsis lyrata HOM05D007008 ORTHO05D008622 5.6e-26 120.9 99 49.5
Thhalv10016011m.g Eutrema salsugineum HOM05D007008 ORTHO05D008622 5.6e-26 120.9 99 49.5
MD15G1042200 Malus domestica HOM05D007008 ORTHO05D008622 5.6e-26 120.9 99 52.5
HanXRQChr03g0081451 Helianthus annuus HOM05D007008 ORTHO05D008622 7.3e-26 120.6 99 52.5
TAR626G0196 Trochodendron aralioides HOM05D007008 ORTHO05D008622 7.3e-26 120.6 99 52.5
Oeu048545.1 Olea europaea HOM05D007008 ORTHO05D008622 1.2e-25 119.8 99 51.5
Hund02976 Selenicereus undatus HOM05D007008 ORTHO05D008622 1.2e-25 119.8 101 50.5
MD08G1054800 Malus domestica HOM05D007008 ORTHO05D008622 1.6e-25 119.4 99 51.5
RcHm_v2.0_Chr6g0299291 Rosa chinensis HOM05D007008 ORTHO05D008622 1.6e-25 119.4 99 51.5
SMO367G1120 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 1.6e-25 119.4 98 50.0
BcaB08g37301 Brassica carinata HOM05D000238 ORTHO05D008622 2.1e-25 119.0 98 50.0
BolC9t59417H Brassica oleracea HOM05D000238 ORTHO05D001043 2.1e-25 119.0 98 49.0
Oeu006861.2 Olea europaea HOM05D007008 ORTHO05D008622 2.1e-25 119.0 99 50.5
PSO170G4073 Papaver somniferum HOM05D007008 ORTHO05D008622 2.1e-25 119.0 99 51.5
PSO357G0206 Papaver somniferum HOM05D007008 ORTHO05D008622 2.1e-25 119.0 99 51.5
Zm00001eb184500 Zea mays HOM05D007008 ORTHO05D008622 2.1e-25 119.0 101 49.5
BcaNung06639 Brassica carinata HOM05D000653 ORTHO05D008622 2.8e-25 118.6 98 48.0
C09p65940 Brassica napus HOM05D007008 ORTHO05D008622 2.8e-25 118.6 98 49.0
Gohir.A07G033600 Gossypium hirsutum HOM05D007008 ORTHO05D008622 2.8e-25 118.6 99 50.5
Gohir.D07G037200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 2.8e-25 118.6 99 50.5
Gorai.001G038800 Gossypium raimondii HOM05D007008 ORTHO05D008622 2.8e-25 118.6 99 50.5
Potri.006G265600 Populus trichocarpa HOM05D007008 ORTHO05D008622 2.8e-25 118.6 99 49.5
Sabra06G0208200 Salix brachista HOM05D007008 ORTHO05D008622 3.6e-25 118.2 102 49.0
Lj5g0019856 Lotus japonicus HOM05D007008 ORTHO05D008622 4.7e-25 117.9 99 49.5
Potri.018G017300 Populus trichocarpa HOM05D007008 ORTHO05D008622 4.7e-25 117.9 99 49.5
Sopen08g002640 Solanum pennellii HOM05D007008 ORTHO05D008622 4.7e-25 117.9 94 54.3
Zm00001eb078360 Zea mays HOM05D007008 ORTHO05D008622 4.7e-25 117.9 101 47.5
BraA10t44733Z Brassica rapa HOM05D000238 ORTHO05D002998 6.2e-25 117.5 98 48.0
CBR_g34568 Chara braunii HOM05D007008 ORTHO05D008622 6.2e-25 117.5 94 55.3
A02p00680 Brassica napus HOM05D000653 ORTHO05D002177 1.1e-24 116.7 98 46.9
C02p04680 Brassica napus HOM05D000653 ORTHO05D002177 1.1e-24 116.7 98 46.9
BolC2t06426H Brassica oleracea HOM05D000238 ORTHO05D001043 1.1e-24 116.7 98 46.9
BraA02t05052Z Brassica rapa HOM05D000238 ORTHO05D001043 1.1e-24 116.7 98 46.9
Rhsim02G0210500 Rhododendron simsii HOM05D007008 ORTHO05D008622 1.1e-24 116.7 108 49.1
arahy.Tifrunner.gnm1.ann1.K1H867 Arachis hypogaea HOM05D007008 ORTHO05D008622 1.8e-24 115.9 99 50.5
BcaC03g13334 Brassica carinata HOM05D000653 ORTHO05D002177 8.9e-24 113.6 98 45.9
Sabra18G0020700 Salix brachista HOM05D007008 ORTHO05D008622 8.9e-24 113.6 103 48.5
Cc11_g00350 Coffea canephora HOM05D007008 ORTHO05D008622 7.6e-23 110.5 93 49.5
GSVIVG01035984001 Vitis vinifera HOM05D007008 ORTHO05D008622 2.2e-22 109.0 92 47.8
Lsat_1_v5_gn_5_62001 Lactuca sativa HOM05D007008 ORTHO05D008622 2.9e-22 108.6 92 47.8
SMO197G0113 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 4.9e-22 107.8 98 44.9
Psat6g026400 Pisum sativum HOM05D007008 ORTHO05D008622 1.5e-18 96.3 72 55.6
MELO3C030305.2 Cucumis melo HOM05D007008 ORTHO05D008622 7.3e-18 94.0 83 47.0
Ah.12g060690 Amaranthus hybridus HOM05D007008 ORTHO05D008622 9.6e-18 93.6 71 54.9
CSS0004043 Camellia sinensis var. sinensis HOM05D007008 ORTHO05D008622 9.6e-18 93.6 72 55.6
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 1.3e-17 93.2 71 53.5
AUR62032427 Chenopodium quinoa HOM05D007008 ORTHO05D008622 1.6e-17 92.8 71 54.9
Gorai.010G119400 Gossypium raimondii HOM05D007008 ORTHO05D008622 1.6e-17 92.8 72 55.6
CiPaw.07G231200 Carya illinoinensis HOM05D007008 ORTHO05D008622 2.8e-17 92.0 69 56.5
HPP92_017465 Vanilla planifolia HOM05D007008 ORTHO05D008622 1.1e-16 90.1 72 54.2
Sp6g32640 Schrenkiella parvula HOM05D000653 ORTHO05D002177 9.0e-16 87.0 71 47.9
Os04g0499200 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 1.2e-15 86.7 85 43.5
Hund25613 Selenicereus undatus HOM05D007008 ORTHO05D008622 1.2e-15 86.7 72 48.6
arahy.Tifrunner.gnm1.ann1.T6XV8N Arachis hypogaea HOM05D007008 ORTHO05D008622 5.8e-15 84.3 69 50.7
SEGI_13302 Sequoiadendron giganteum HOM05D007008 ORTHO05D008622 7.6e-15 84.0 69 52.2
Thecc.01G194900 Theobroma cacao HOM05D007008 ORTHO05D008622 3.6e-09 65.1 68 44.1
Thecc.02G190100 Theobroma cacao HOM05D007008 ORTHO05D008622 3.6e-09 65.1 102 33.3
Thecc.02G024500 Theobroma cacao HOM05D007008 ORTHO05D008622 4.8e-09 64.7 64 43.8
Os02g0611450 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 3.4e-07 58.5 43 53.5


User provided reference genes

Program Settings