Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.0e-166 590.1 320 100.0
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.5e-40 171.0 268 40.3
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.2e-39 167.9 312 36.2
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 3.6e-31 139.8 187 42.2
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.3e-30 137.1 163 46.0
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 3.1e-30 136.7 156 44.9
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 3.1e-30 136.7 160 43.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 5.2e-30 136.0 158 44.9
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 6.8e-30 135.6 185 40.5
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 6.8e-30 135.6 156 48.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 6.8e-30 135.6 156 43.6
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.5e-29 134.4 156 44.2
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 1.5e-29 134.4 156 43.6
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 1.5e-29 134.4 176 42.0
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.0e-29 134.0 156 44.9
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 2.0e-29 134.0 160 41.9
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 2.0e-29 134.0 184 41.3
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.6e-29 133.7 158 42.4
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 5.8e-29 132.5 156 43.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 5.8e-29 132.5 156 43.6
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 5.8e-29 132.5 158 43.0
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 5.8e-29 132.5 158 40.5
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 7.5e-29 132.1 202 43.1
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 7.5e-29 132.1 160 42.5
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 7.5e-29 132.1 159 43.4
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 7.5e-29 132.1 160 43.1
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 9.9e-29 131.7 161 44.1
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 9.9e-29 131.7 162 44.4
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 9.9e-29 131.7 158 42.4
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.3e-28 131.3 158 42.4
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.3e-28 131.3 158 42.4
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 1.3e-28 131.3 158 41.8
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-28 131.3 162 44.4
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-28 131.3 162 44.4
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-28 131.3 162 44.4
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.3e-28 131.3 225 36.9
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.7e-28 131.0 156 43.6
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.7e-28 131.0 156 43.6
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 2.2e-28 130.6 156 42.9
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 2.2e-28 130.6 163 44.2
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 2.2e-28 130.6 119 51.3
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.9e-28 130.2 158 44.9
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 3.7e-28 129.8 158 41.8
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.7e-28 129.8 183 39.3
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.7e-28 129.8 156 41.0
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 3.7e-28 129.8 161 43.5
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 3.7e-28 129.8 158 41.8
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 4.9e-28 129.4 156 42.9
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 4.9e-28 129.4 156 42.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 4.9e-28 129.4 156 42.9
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 4.9e-28 129.4 156 42.9
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 6.4e-28 129.0 156 41.0
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 6.4e-28 129.0 156 41.7
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 6.4e-28 129.0 158 40.5
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 6.4e-28 129.0 161 42.9
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 8.3e-28 128.6 158 41.8
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 8.3e-28 128.6 158 41.8
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 8.3e-28 128.6 158 41.8
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 8.3e-28 128.6 160 40.0
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 8.3e-28 128.6 160 40.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.3e-28 128.6 160 40.6
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 8.3e-28 128.6 160 40.6
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 8.3e-28 128.6 210 36.7
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 8.3e-28 128.6 158 41.1
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.1e-27 128.3 156 41.7
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.1e-27 128.3 147 45.6
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.1e-27 128.3 158 41.8
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.1e-27 128.3 158 39.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 1.4e-27 127.9 187 38.5
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-27 127.9 158 39.9
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.9e-27 127.5 196 39.3
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.9e-27 127.5 160 41.9
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.9e-27 127.5 188 42.6
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.4e-27 127.1 119 49.6
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 2.4e-27 127.1 160 39.4
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 2.4e-27 127.1 158 39.9
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 3.2e-27 126.7 160 40.0
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 3.2e-27 126.7 186 37.1
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 4.1e-27 126.3 156 41.7
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 4.1e-27 126.3 181 38.7
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 5.4e-27 125.9 185 37.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 5.4e-27 125.9 159 39.6
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 7.1e-27 125.6 235 34.5
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 9.2e-27 125.2 159 39.0
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.2e-26 124.8 199 36.7
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.2e-26 124.8 172 40.1
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.1e-26 124.0 194 36.6
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 2.1e-26 124.0 194 36.6
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 2.7e-26 123.6 252 36.9
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.6e-26 122.9 159 42.8
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 6.0e-26 122.5 167 40.1
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 1.0e-25 121.7 209 35.4
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.0e-25 121.7 155 40.6
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.0e-25 121.7 155 40.6
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.3e-25 121.3 242 34.3
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.3e-25 120.6 250 34.4
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 5.1e-25 119.4 156 42.3
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 5.1e-25 119.4 159 40.9
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 5.1e-25 119.4 159 40.9
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 5.1e-25 119.4 160 41.9
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 8.6e-25 118.6 156 42.3
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.5e-24 117.9 180 37.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.5e-24 117.1 195 34.9
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.5e-24 117.1 223 35.4
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 4.3e-24 116.3 118 42.4
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 5.6e-24 115.9 253 38.3
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 1.1e-19 101.7 206 31.6
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 4.1e-19 99.8 240 28.3
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.6e-17 92.4 177 36.7
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 4.6e-10 69.7 60 51.7
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.6e-10 69.7 113 39.8
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.8e-10 68.9 58 53.4


User provided reference genes

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