Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 2.4e-287 991.5 511 100.0
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 4.5e-52 209.9 538 32.9
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.8e-49 200.7 529 31.6
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 6.1e-49 199.5 529 31.6
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 3.0e-48 197.2 529 31.4
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.0e-48 197.2 529 31.2
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 4.0e-48 196.8 524 31.5
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.0e-48 196.8 521 30.5
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 5.2e-48 196.4 529 31.6
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 5.2e-48 196.4 524 30.9
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 6.8e-48 196.1 464 31.9
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 1.5e-47 194.9 465 32.9
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.5e-47 194.9 494 32.0
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 2.0e-47 194.5 465 32.9
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 2.0e-47 194.5 494 31.8
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 2.0e-47 194.5 467 32.1
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 3.4e-47 193.7 465 33.5
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 3.4e-47 193.7 461 32.3
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 4.4e-47 193.4 501 31.5
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 5.8e-47 193.0 463 31.7
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 5.8e-47 193.0 495 31.9
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 9.8e-47 192.2 495 31.9
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 9.8e-47 192.2 491 31.8
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 1.7e-46 191.4 465 33.8
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 1.7e-46 191.4 465 32.5
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 1.7e-46 191.4 464 31.9
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 1.7e-46 191.4 463 31.5
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 1.7e-46 191.4 463 31.7
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 2.2e-46 191.0 476 32.1
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 2.2e-46 191.0 492 32.1
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 2.2e-46 191.0 525 32.0
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 3.7e-46 190.3 463 31.7
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 3.7e-46 190.3 464 32.1
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 4.9e-46 189.9 470 32.3
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 8.3e-46 189.1 548 30.1
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 1.1e-45 188.7 465 32.0
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.8e-45 188.0 527 31.1
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 1.8e-45 188.0 518 30.5
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 2.4e-45 187.6 470 31.9
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 2.4e-45 187.6 504 31.7
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 3.2e-45 187.2 467 33.6
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 3.2e-45 187.2 527 31.7
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 3.2e-45 187.2 470 32.1
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 4.1e-45 186.8 467 33.6
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 4.1e-45 186.8 526 31.9
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 4.1e-45 186.8 520 30.4
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 5.4e-45 186.4 498 31.1
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 5.4e-45 186.4 461 31.5
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 5.4e-45 186.4 497 30.2
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 7.0e-45 186.0 465 31.6
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 9.2e-45 185.7 463 31.7
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 9.2e-45 185.7 476 31.5
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 1.2e-44 185.3 466 32.2
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 1.2e-44 185.3 519 30.3
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 1.2e-44 185.3 523 31.5
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.2e-44 185.3 464 31.5
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.2e-44 185.3 494 30.8
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 1.6e-44 184.9 466 31.1
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 1.6e-44 184.9 466 31.1
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 2.7e-44 184.1 494 29.1
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 2.7e-44 184.1 465 30.8
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 2.7e-44 184.1 522 31.2
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 3.5e-44 183.7 465 33.3
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 3.5e-44 183.7 473 31.3
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 6.0e-44 183.0 532 31.0
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 6.0e-44 183.0 463 31.5
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 7.8e-44 182.6 468 31.4
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 7.8e-44 182.6 499 31.3
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 7.8e-44 182.6 471 31.2
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 7.8e-44 182.6 522 29.3
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 7.8e-44 182.6 522 29.3
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.0e-43 182.2 502 30.7
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.3e-43 181.8 468 31.6
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.3e-43 181.8 499 31.7
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.3e-43 181.8 467 30.4
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 1.3e-43 181.8 464 31.5
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.7e-43 181.4 465 32.0
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.7e-43 181.4 469 32.6
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 2.3e-43 181.0 473 30.9
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 2.3e-43 181.0 466 31.1
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 2.3e-43 181.0 524 29.6
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 2.3e-43 181.0 464 30.2
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 3.0e-43 180.6 514 31.1
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 3.0e-43 180.6 468 31.2
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 3.0e-43 180.6 491 31.4
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 3.9e-43 180.3 439 33.7
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 8.6e-43 179.1 521 30.7
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 8.6e-43 179.1 466 31.1
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 1.1e-42 178.7 496 29.8
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 1.1e-42 178.7 520 30.2
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 1.1e-42 178.7 483 31.5
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 1.5e-42 178.3 468 30.8
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 1.5e-42 178.3 458 31.0
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 1.5e-42 178.3 450 30.7
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 1.5e-42 178.3 475 31.2
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.9e-42 177.9 463 29.6
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 1.9e-42 177.9 475 31.4
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.9e-42 177.9 519 28.5
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 2.5e-42 177.6 463 31.5
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 2.5e-42 177.6 498 30.1
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 2.5e-42 177.6 523 30.0
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 3.3e-42 177.2 466 30.5
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 3.3e-42 177.2 463 31.1
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 3.3e-42 177.2 463 31.5
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 3.3e-42 177.2 502 29.9
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 3.3e-42 177.2 521 29.0
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 3.3e-42 177.2 528 29.4
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 7.3e-42 176.0 521 28.4
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 9.5e-42 175.6 498 30.1
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.2e-41 175.3 463 31.1
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 1.2e-41 175.3 473 31.1
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 1.2e-41 175.3 495 29.5
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 2.1e-41 174.5 495 28.5
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 2.1e-41 174.5 473 31.9
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.8e-41 174.1 466 29.6
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 3.6e-41 173.7 490 30.8
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 4.7e-41 173.3 518 28.8
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 8.0e-41 172.6 489 30.5
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 2.3e-40 171.0 434 33.4
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 2.3e-40 171.0 467 30.4
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 3.1e-40 170.6 457 30.2
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 4.4e-39 166.8 461 30.2
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 7.5e-39 166.0 467 30.8
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 7.5e-39 166.0 432 31.5
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 9.8e-39 165.6 488 29.1
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 2.2e-38 164.5 459 30.9
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 4.9e-38 163.3 499 28.5
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 8.3e-38 162.5 564 29.1
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.1e-37 160.2 544 27.8
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 3.5e-36 157.1 497 28.2
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 4.6e-36 156.8 435 28.7
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 1.0e-35 155.6 268 34.0
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 3.0e-35 154.1 437 29.7
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 1.5e-34 151.8 462 29.2
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 2.1e-33 147.9 493 31.0
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.1e-32 145.6 273 33.3
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 1.1e-32 145.6 305 31.8
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.6e-31 141.0 125 49.6
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.6e-31 141.0 125 49.6
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 2.6e-31 141.0 113 54.0
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.3e-30 138.7 119 52.1
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 9.5e-26 122.5 118 48.3
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 8.9e-24 115.9 455 25.5
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 1.2e-23 115.5 162 41.4
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 1.3e-22 112.1 92 56.5
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 3.8e-22 110.5 164 39.0
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 2.4e-21 107.8 326 26.7
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 3.0e-19 100.9 73 61.6
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 3.1e-16 90.9 122 42.6
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.1e-12 78.2 132 28.0
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 2.7e-12 77.8 364 25.8
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 9.9e-07 59.3 119 31.1
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 2.9e-06 57.8 266 27.4


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