Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 4.7e-164 581.3 322 100.0
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 1.2e-42 177.9 286 40.6
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.1e-40 171.4 262 38.2
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 1.5e-40 171.0 258 39.5
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 4.3e-40 169.5 262 39.3
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 5.6e-40 169.1 257 38.9
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 5.6e-40 169.1 259 37.5
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.3e-40 168.7 261 38.7
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 7.3e-40 168.7 272 38.6
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 9.6e-40 168.3 257 38.9
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 9.6e-40 168.3 257 38.9
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 1.6e-39 167.5 260 38.8
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.6e-39 167.5 260 37.3
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.1e-39 167.2 275 37.1
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 2.8e-39 166.8 254 39.0
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 2.8e-39 166.8 260 37.3
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.6e-39 166.4 259 37.5
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 3.6e-39 166.4 259 37.5
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 4.7e-39 166.0 268 37.3
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 4.7e-39 166.0 257 38.1
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 8.1e-39 165.2 260 36.9
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 8.1e-39 165.2 260 36.9
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.4e-38 164.5 262 40.1
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 1.4e-38 164.5 257 39.3
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.8e-38 164.1 257 37.7
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.8e-38 164.1 257 38.5
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 3.1e-38 163.3 272 38.6
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 3.1e-38 163.3 281 39.1
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 4.0e-38 162.9 257 37.0
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 5.2e-38 162.5 262 38.5
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 5.2e-38 162.5 290 38.3
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 5.2e-38 162.5 271 36.2
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 5.2e-38 162.5 257 37.0
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 6.9e-38 162.2 262 38.2
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 6.9e-38 162.2 257 36.6
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 8.9e-38 161.8 270 35.9
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 1.2e-37 161.4 254 37.8
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.2e-37 161.4 254 37.4
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 1.5e-37 161.0 263 38.8
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 4.4e-37 159.5 261 37.2
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 7.6e-37 158.7 261 36.4
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 7.6e-37 158.7 265 37.0
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 7.6e-37 158.7 254 39.0
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 7.6e-37 158.7 269 38.3
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 9.9e-37 158.3 292 36.6
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 9.9e-37 158.3 254 35.8
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 1.3e-36 157.9 261 36.0
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.3e-36 157.9 260 35.4
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 1.3e-36 157.9 257 36.6
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.3e-36 157.9 252 36.1
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 1.3e-36 157.9 283 36.4
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 1.7e-36 157.5 263 36.5
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 1.7e-36 157.5 257 37.7
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 2.9e-36 156.8 262 37.8
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 2.9e-36 156.8 254 35.4
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 2.9e-36 156.8 265 36.6
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 3.8e-36 156.4 254 36.2
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 3.8e-36 156.4 265 38.1
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 3.8e-36 156.4 255 36.5
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 3.8e-36 156.4 280 35.4
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 6.4e-36 155.6 270 35.6
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 8.4e-36 155.2 254 35.8
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 8.4e-36 155.2 254 35.8
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.1e-35 154.8 262 37.4
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.9e-35 154.1 255 37.3
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 2.4e-35 153.7 251 38.2
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 3.2e-35 153.3 257 36.2
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 3.2e-35 153.3 257 34.6
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 4.2e-35 152.9 254 35.8
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 4.2e-35 152.9 254 35.8
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 4.2e-35 152.9 257 35.0
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 4.2e-35 152.9 259 37.1
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 5.4e-35 152.5 254 35.4
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 7.1e-35 152.1 254 38.2
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 1.2e-34 151.4 257 35.4
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 1.6e-34 151.0 288 34.4
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 2.7e-34 150.2 264 34.5
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 2.7e-34 150.2 259 37.1
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.7e-34 150.2 259 35.5
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 2.7e-34 150.2 260 34.6
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 3.5e-34 149.8 254 35.4
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 4.6e-34 149.4 286 35.7
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 1.0e-33 148.3 257 35.0
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.3e-33 147.9 257 35.0
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.3e-33 147.9 304 32.6
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 1.7e-33 147.5 259 34.7
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 6.6e-33 145.6 272 36.0
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 4.3e-32 142.9 262 36.6
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 9.6e-32 141.7 290 31.7
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.3e-31 141.4 254 36.2
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.3e-31 141.4 279 34.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 1.1e-30 138.3 235 35.7
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 3.1e-30 136.7 290 32.8
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 6.9e-30 135.6 216 38.4
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.3e-28 131.3 227 37.4
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 8.4e-28 128.6 216 35.6
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 1.1e-27 128.3 218 35.8
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 5.4e-27 125.9 311 31.8
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.6e-26 124.4 216 34.3
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 6.0e-26 122.5 216 34.7
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.0e-25 121.7 198 35.4
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.9e-24 117.5 196 36.7
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 3.3e-24 116.7 254 30.3
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 7.4e-24 115.5 168 38.1
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 9.6e-24 115.2 193 36.8
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.3e-22 109.4 138 42.0
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 2.0e-21 107.5 235 34.5
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.7e-20 104.4 108 44.4
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 3.5e-18 96.7 233 32.6
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 3.1e-14 83.6 176 32.4
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.2e-10 71.6 151 35.1
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 6.0e-10 69.3 151 35.8
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.3e-09 67.4 151 35.1
AagrBONN_evm.TU.Sc2ySwM_117.310 Anthoceros agrestis HOM05D020303 ORTHO05D021299 3.9e-09 66.6 110 38.2
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 4.3e-08 63.2 152 33.6
Mapoly0003s0180 Marchantia polymorpha HOM05D020303 ORTHO05D021299 4.3e-08 63.2 155 32.3


User provided reference genes

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