Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 1.2e-114 417.2 317 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 5.4e-11 72.8 204 32.4
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.6e-10 71.2 157 38.2
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.7e-10 70.5 144 38.9
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 3.9e-09 66.6 157 36.3
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 8.6e-09 65.5 144 37.5
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 8.6e-09 65.5 208 36.1
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.9e-08 64.3 159 34.0
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.9e-08 64.3 159 34.0
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 3.3e-08 63.5 167 37.7
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 3.3e-08 63.5 226 31.9
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 5.6e-08 62.8 141 36.9
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 5.6e-08 62.8 145 38.6
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 7.3e-08 62.4 160 34.4
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 7.3e-08 62.4 167 35.3
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.2e-07 61.6 165 35.8
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.6e-07 61.2 122 35.2
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.6e-07 61.2 157 34.4
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.6e-07 61.2 207 32.9
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.1e-07 60.8 157 35.7
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 2.1e-07 60.8 138 39.9
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 2.1e-07 60.8 159 32.7
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 2.1e-07 60.8 177 35.0
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 2.8e-07 60.5 138 36.2
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 3.6e-07 60.1 183 31.7
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 3.6e-07 60.1 175 36.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 4.7e-07 59.7 163 35.6
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 4.7e-07 59.7 162 37.7
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 4.7e-07 59.7 184 29.9
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 4.7e-07 59.7 160 35.0
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 6.2e-07 59.3 172 31.4
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 6.2e-07 59.3 159 37.7
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 8.0e-07 58.9 140 35.0
Cre02.g095850 Chlamydomonas reinhardtii HOM05D005155 ORTHO05D006266 8.0e-07 58.9 234 31.2
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.1e-06 58.5 159 34.6
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.1e-06 58.5 166 34.9
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 1.1e-06 58.5 140 35.0
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.1e-06 58.5 152 34.2
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.1e-06 58.5 168 33.3
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.1e-06 58.5 175 35.4
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.1e-06 58.5 181 34.3
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.4e-06 58.2 140 33.6
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.4e-06 58.2 163 35.0
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.4e-06 58.2 189 33.9
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.8e-06 57.8 161 36.0
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.8e-06 57.8 167 34.1
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.8e-06 57.8 186 32.8
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.8e-06 57.8 186 32.8
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.3e-06 57.4 159 34.0
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 2.3e-06 57.4 198 34.3
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.3e-06 57.4 191 35.6
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.3e-06 57.4 159 36.5
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 2.3e-06 57.4 126 33.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.3e-06 57.4 167 32.3
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.3e-06 57.4 167 32.3
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 2.3e-06 57.4 163 31.3
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.3e-06 57.4 169 35.5
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 2.3e-06 57.4 207 33.3
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 3.1e-06 57.0 197 32.0
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 3.1e-06 57.0 163 33.7
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.0e-06 56.6 163 34.4
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 4.0e-06 56.6 171 33.3
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.0e-06 56.6 162 34.6
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 4.0e-06 56.6 191 31.9
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 4.0e-06 56.6 159 36.5
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 5.2e-06 56.2 168 32.7
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 5.2e-06 56.2 159 34.0
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.8e-06 55.8 156 34.0
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 6.8e-06 55.8 168 35.1
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 6.8e-06 55.8 153 35.9
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 8.9e-06 55.5 197 32.0
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 8.9e-06 55.5 174 35.6
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 8.9e-06 55.5 163 30.7


User provided reference genes

Program Settings