Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.1e-168 595.1 313 100.0
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.5e-26 122.9 220 37.7
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 8.4e-25 118.6 207 35.7
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 2.5e-24 117.1 209 37.8
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 7.1e-24 115.5 207 37.7
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 2.1e-23 114.0 209 37.3
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 2.7e-23 113.6 209 37.3
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 7.9e-23 112.1 205 35.1
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 7.9e-23 112.1 188 38.3
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.8e-22 110.9 211 33.2
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.8e-22 110.9 189 37.0
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.9e-22 109.8 209 35.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.1e-21 108.2 215 34.4
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.1e-21 108.2 181 38.1
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.5e-21 107.8 209 34.4
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 3.3e-21 106.7 200 36.5
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.6e-20 104.4 209 33.0
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 2.2e-20 104.0 203 35.0
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.8e-20 103.6 209 33.0
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.8e-20 103.6 190 35.3
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.7e-20 103.2 190 34.7
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 6.3e-20 102.4 205 34.1
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 6.3e-20 102.4 186 34.9
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 6.3e-20 102.4 207 34.8
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.1e-19 101.7 209 34.4
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-19 101.7 209 34.4
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.4e-19 101.3 209 34.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 1.4e-19 101.3 154 40.3
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.4e-19 101.3 207 32.4
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.4e-19 101.3 209 34.9
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.4e-19 101.3 201 32.3
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 1.8e-19 100.9 207 30.9
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.8e-19 100.9 190 35.3
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.8e-19 100.9 209 33.5
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.8e-19 100.9 203 32.5
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 2.4e-19 100.5 209 33.0
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.4e-19 100.5 203 33.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.1e-19 100.1 205 33.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 3.1e-19 100.1 209 34.0
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 3.1e-19 100.1 188 34.6
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 4.1e-19 99.8 180 34.4
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.3e-19 99.4 209 34.0
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 5.3e-19 99.4 207 33.3
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 5.3e-19 99.4 208 31.7
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 5.3e-19 99.4 203 32.5
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 5.3e-19 99.4 209 32.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 5.3e-19 99.4 209 33.5
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 6.9e-19 99.0 209 34.0
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 6.9e-19 99.0 210 34.3
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 6.9e-19 99.0 209 34.0
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 6.9e-19 99.0 209 33.5
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 9.0e-19 98.6 190 33.7
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 9.0e-19 98.6 207 31.9
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 9.0e-19 98.6 207 31.9
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 9.0e-19 98.6 209 32.5
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.2e-18 98.2 209 34.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.2e-18 98.2 209 31.6
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.2e-18 98.2 201 31.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.5e-18 97.8 209 32.5
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.5e-18 97.8 205 33.2
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.5e-18 97.8 207 30.4
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 2.0e-18 97.4 209 32.1
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 2.6e-18 97.1 209 32.1
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 2.6e-18 97.1 209 34.0
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.6e-18 97.1 165 32.7
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 2.6e-18 97.1 229 33.6
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 3.4e-18 96.7 203 31.5
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 4.5e-18 96.3 209 33.0
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 4.5e-18 96.3 209 32.5
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 4.5e-18 96.3 209 34.0
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.0e-17 95.1 209 32.5
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.7e-17 94.4 205 32.7
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 2.2e-17 94.0 207 31.4
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 2.9e-17 93.6 157 35.0
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.9e-17 93.6 197 30.5
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.8e-17 93.2 190 32.6
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 3.8e-17 93.2 209 33.0
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 5.0e-17 92.8 190 32.1
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 5.0e-17 92.8 190 32.1
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.5e-17 92.4 218 31.7
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.1e-16 91.7 190 31.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.4e-16 91.3 190 32.1
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.9e-16 90.9 190 33.2
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.5e-16 90.5 190 31.6
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 2.5e-16 90.5 190 31.6
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.5e-16 90.5 190 31.6
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.5e-16 90.5 190 31.6
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 3.2e-16 90.1 185 31.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 4.2e-16 89.7 190 31.6
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 5.5e-16 89.4 190 31.1
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 5.5e-16 89.4 232 29.3
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 7.2e-16 89.0 233 27.9
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 9.4e-16 88.6 187 34.2
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 2.1e-15 87.4 209 30.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 3.6e-15 86.7 209 31.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 4.6e-15 86.3 210 30.0
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 4.6e-15 86.3 188 34.0
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.4e-14 84.7 167 31.7
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 6.7e-14 82.4 160 31.2
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 2.0e-13 80.9 219 30.1
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.7e-12 76.6 203 29.1
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.1e-11 73.6 203 28.1
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.5e-10 69.7 129 37.2
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 5.9e-10 69.3 161 34.2
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 2.2e-09 67.4 153 32.7


User provided reference genes

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