Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 2.7e-252 874.8 427 100.0
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.1e-80 304.7 397 41.6
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 3.4e-77 293.1 412 39.3
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 5.4e-75 285.8 399 40.6
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.1e-74 283.9 396 40.4
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 1.3e-73 281.2 397 39.3
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.3e-28 131.7 396 29.3
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 5.0e-28 129.8 399 27.8
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 1.9e-27 127.9 271 34.3
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 9.4e-27 125.6 270 32.2
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 2.1e-26 124.4 264 33.0
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.7e-26 124.0 274 32.8
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.7e-26 124.0 275 32.7
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 3.6e-26 123.6 274 32.8
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 3.6e-26 123.6 400 28.8
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 6.1e-26 122.9 269 31.6
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 6.1e-26 122.9 278 32.0
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.0e-25 122.1 414 27.3
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 1.8e-25 121.3 397 27.5
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 2.3e-25 120.9 395 27.3
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 5.2e-25 119.8 273 30.4
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 5.2e-25 119.8 274 31.8
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 6.8e-25 119.4 308 31.5
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 8.8e-25 119.0 274 32.1
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 1.2e-24 118.6 274 31.0
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 1.5e-24 118.2 406 27.8
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 2.0e-24 117.9 270 32.2
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 2.0e-24 117.9 398 27.6
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.0e-24 117.9 391 28.9
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 2.6e-24 117.5 433 25.9
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 5.7e-24 116.3 274 30.7
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 7.5e-24 115.9 395 27.1
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 7.5e-24 115.9 395 27.1
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 9.8e-24 115.5 273 31.9
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 1.7e-23 114.8 274 30.7
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 1.7e-23 114.8 264 33.3
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.7e-23 114.8 275 32.0
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 2.8e-23 114.0 409 27.1
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 3.7e-23 113.6 396 27.0
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 3.7e-23 113.6 276 31.2
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 3.7e-23 113.6 268 32.5
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 3.7e-23 113.6 268 31.7
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 4.8e-23 113.2 408 28.2
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 4.8e-23 113.2 275 32.0
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 4.8e-23 113.2 273 30.4
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 4.8e-23 113.2 274 31.0
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 8.3e-23 112.5 404 26.7
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 8.3e-23 112.5 274 30.7
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 8.3e-23 112.5 276 30.8
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 8.3e-23 112.5 268 31.3
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 8.3e-23 112.5 276 29.7
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.4e-22 111.7 272 30.1
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.4e-22 111.7 272 30.1
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 3.1e-22 110.5 265 30.9
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 4.1e-22 110.2 270 31.5
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 5.4e-22 109.8 402 27.4
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 5.4e-22 109.8 287 31.7
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 7.0e-22 109.4 343 27.7
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 7.0e-22 109.4 272 29.4
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 7.0e-22 109.4 274 31.0
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 7.0e-22 109.4 271 32.1
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 7.0e-22 109.4 396 27.3
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 7.0e-22 109.4 263 31.9
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 7.0e-22 109.4 403 27.0
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 9.1e-22 109.0 268 29.1
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 9.1e-22 109.0 269 30.1
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 9.1e-22 109.0 268 31.0
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.2e-21 108.6 264 29.9
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 1.2e-21 108.6 265 29.8
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.2e-21 108.6 270 30.4
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.2e-21 108.6 263 31.9
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 2.0e-21 107.8 396 26.5
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 2.0e-21 107.8 269 30.9
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 2.7e-21 107.5 270 30.0
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 3.5e-21 107.1 402 28.1
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 4.5e-21 106.7 261 30.7
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 5.9e-21 106.3 266 29.7
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 7.7e-21 105.9 269 29.7
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 7.7e-21 105.9 397 28.2
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 1.0e-20 105.5 265 29.8
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.0e-20 105.5 276 30.8
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.0e-20 105.5 275 30.5
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 1.3e-20 105.1 263 30.0
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 1.7e-20 104.8 276 30.8
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.9e-20 104.0 271 30.3
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 8.5e-20 102.4 413 26.4
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 8.5e-20 102.4 405 27.2
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.1e-19 102.1 303 28.4
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.1e-19 102.1 120 40.0
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.5e-19 101.7 434 26.0
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 1.9e-19 101.3 291 29.6
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.9e-19 101.3 293 29.0
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 2.5e-19 100.9 269 29.4
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 3.2e-19 100.5 398 26.9
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 5.5e-19 99.8 371 26.1
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 9.4e-19 99.0 384 26.6
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 9.4e-19 99.0 120 40.8
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 2.7e-18 97.4 120 40.0
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 3.6e-18 97.1 120 38.3
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 5.2e-17 93.2 279 29.7
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 8.8e-17 92.4 120 37.5
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 8.8e-17 92.4 430 25.8
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 1.2e-16 92.0 362 26.2
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 2.6e-16 90.9 420 25.5
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 2.2e-15 87.8 103 42.7
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.8e-14 84.7 249 28.1
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 2.4e-14 84.3 234 28.2
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.5e-13 80.5 118 39.0
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 1.1e-06 58.9 87 35.6


User provided reference genes

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