Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 3.8e-199 698.0 356 100.0
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 3.0e-18 97.1 275 33.1
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 3.1e-15 87.0 262 29.8
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 2.0e-14 84.3 285 29.5
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 5.8e-14 82.8 275 28.7
MCO15G325 Micromonas commoda HOM05D004681 ORTHO05D005541 3.8e-13 80.1 281 28.8
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 1.9e-12 77.8 306 26.5
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 5.5e-12 76.3 311 26.4
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 4.6e-11 73.2 258 29.1
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 6.0e-11 72.8 247 27.9
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 1.3e-10 71.6 297 25.6
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.3e-10 71.6 260 28.5
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 2.3e-10 70.9 311 24.8
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 5.1e-10 69.7 308 24.7
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 5.1e-10 69.7 329 26.7
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 5.1e-10 69.7 322 26.1
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 6.7e-10 69.3 244 27.9
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.1e-09 68.6 306 26.1
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 3.3e-09 67.0 256 29.3
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 3.3e-09 67.0 305 26.2
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 4.3e-09 66.6 255 28.2
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 5.7e-09 66.2 309 25.9
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 5.7e-09 66.2 309 25.9
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 5.7e-09 66.2 315 25.4
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.1e-08 64.3 309 25.9
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 2.1e-08 64.3 244 26.2
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 2.1e-08 64.3 313 24.9
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 2.1e-08 64.3 245 26.1
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 2.1e-08 64.3 305 24.3
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.8e-08 63.9 322 25.5
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 2.8e-08 63.9 267 26.6
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.7e-08 63.5 307 25.1
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 4.8e-08 63.2 334 25.1
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 6.3e-08 62.8 253 26.9
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 6.3e-08 62.8 311 25.1
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 8.2e-08 62.4 251 26.3
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.1e-07 62.0 305 23.9
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 1.1e-07 62.0 324 25.9
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 1.4e-07 61.6 307 25.4
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.4e-07 61.6 298 25.8
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.4e-07 61.6 324 25.0
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.8e-07 61.2 307 24.8
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.8e-07 61.2 308 24.0
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.8e-07 61.2 249 27.3
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 2.4e-07 60.8 327 24.8
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 2.4e-07 60.8 309 25.2
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 3.1e-07 60.5 306 23.5
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 3.1e-07 60.5 249 26.5
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 4.1e-07 60.1 307 24.8
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 4.1e-07 60.1 310 24.8
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 5.3e-07 59.7 314 23.6
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 5.3e-07 59.7 304 23.4
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 6.9e-07 59.3 251 26.3
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 6.9e-07 59.3 313 23.6
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 6.9e-07 59.3 261 28.0
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.2e-06 58.5 309 25.6
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.2e-06 58.5 335 23.9
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 1.2e-06 58.5 251 27.1
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.5e-06 58.2 286 24.1
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.5e-06 58.2 286 24.1
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 1.5e-06 58.2 286 24.1
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.5e-06 58.2 304 24.0
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.0e-06 57.8 322 23.9
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 2.0e-06 57.8 274 26.6
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 5.9e-06 56.2 309 24.9
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 7.6e-06 55.8 304 23.4
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 7.6e-06 55.8 246 26.8
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 7.6e-06 55.8 304 22.7
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 7.6e-06 55.8 311 24.1
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 7.6e-06 55.8 309 24.3
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 7.6e-06 55.8 332 23.5


User provided reference genes

Program Settings