Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 1.1e-145 520.0 267 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 2.5e-62 243.0 254 52.4
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 1.3e-58 230.7 260 48.5
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.2e-58 229.9 254 51.2
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 4.2e-57 225.7 256 47.7
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 2.3e-55 219.9 252 50.8
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 1.1e-54 217.6 251 50.6
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 1.1e-54 217.6 254 47.2
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 1.5e-54 217.2 254 46.9
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 2.5e-54 216.5 252 49.2
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 2.5e-54 216.5 260 48.5
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 2.5e-54 216.5 254 47.2
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 3.3e-54 216.1 254 47.2
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 4.3e-54 215.7 251 49.8
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 4.3e-54 215.7 257 50.2
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 5.7e-54 215.3 254 48.0
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 7.4e-54 214.9 255 47.1
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 9.6e-54 214.5 251 49.4
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 2.1e-53 213.4 256 47.7
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 2.8e-53 213.0 254 46.5
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 3.7e-53 212.6 254 44.5
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 4.8e-53 212.2 254 46.5
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 4.8e-53 212.2 242 51.2
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 1.8e-52 210.3 254 44.5
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 2.4e-52 209.9 254 46.5
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 2.4e-52 209.9 252 46.0
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 3.1e-52 209.5 251 47.4
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 4.1e-52 209.1 251 47.0
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 9.0e-52 208.0 254 43.3
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 2.6e-51 206.5 253 45.8
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.7e-50 203.8 252 47.6
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.7e-50 203.8 252 44.8
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 3.8e-50 202.6 254 45.7
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 1.1e-49 201.1 254 45.3
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 4.2e-49 199.1 253 46.2
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 1.8e-47 193.7 266 45.1
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 1.1e-46 191.0 256 44.9
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 5.0e-42 175.6 219 46.1
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.6e-40 169.5 218 44.0
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.9e-39 166.0 235 40.9
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.0e-34 151.4 241 40.2
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 2.3e-31 140.2 177 45.2
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 7.5e-22 108.6 138 45.7
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 1.3e-21 107.8 109 50.5
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.6e-19 100.9 92 52.2
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 3.5e-19 99.8 135 43.7
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 4.5e-19 99.4 93 53.8
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 2.2e-18 97.1 115 42.6
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 3.6e-16 89.7 134 40.3
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 8.8e-15 85.1 206 31.6
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.6e-14 83.6 101 47.5
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 3.4e-14 83.2 82 52.4
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 4.8e-13 79.3 139 35.3
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 1.2e-11 74.7 159 33.3
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 5.0e-10 69.3 97 37.1


User provided reference genes

Program Settings