Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000315 Prasinoderma coloniale HOM05D004957 ORTHO05D006741 1.6e-163 579.3 284 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2921 Anthoceros agrestis HOM05D004957 ORTHO05D006741 2.1e-30 137.1 293 30.7
SEGI_35484 Sequoiadendron giganteum HOM05D004957 ORTHO05D006741 1.5e-28 131.0 295 29.5
AL5G32800 Arabidopsis lyrata HOM05D004957 ORTHO05D006741 1.1e-26 124.8 293 32.1
CARHR161970 Cardamine hirsuta HOM05D004957 ORTHO05D006741 2.4e-26 123.6 289 31.5
MSTRG.27517 Avicennia marina HOM05D004957 ORTHO05D006741 3.1e-26 123.2 297 28.6
HanXRQChr14g0456261 Helianthus annuus HOM05D004957 ORTHO05D006741 4.1e-26 122.9 287 30.3
Thhalv10010496m.g Eutrema salsugineum HOM05D004957 ORTHO05D006741 5.3e-26 122.5 297 30.0
THA.LOC104806007 Tarenaya hassleriana HOM05D004957 ORTHO05D006741 5.3e-26 122.5 287 31.0
Ah.04g163600 Amaranthus hybridus HOM05D004957 ORTHO05D006741 1.2e-25 121.3 287 32.1
C08p27450 Brassica napus HOM05D004957 ORTHO05D006741 1.2e-25 121.3 293 29.7
Lj3A933T41 Lonicera japonica HOM05D004957 ORTHO05D006741 1.2e-25 121.3 287 29.6
Migut.F00921 Erythranthe guttata HOM05D004957 ORTHO05D006741 1.5e-25 120.9 292 27.4
FAN03G2263 Fragaria x ananassa HOM05D004957 ORTHO05D006741 1.5e-25 120.9 287 31.4
AT3G52210 Arabidopsis thaliana HOM05D004957 ORTHO05D006741 2.0e-25 120.6 292 29.8
BcaC07g39591 Brassica carinata HOM05D004957 ORTHO05D006741 2.0e-25 120.6 293 29.7
A09p45270 Brassica napus HOM05D004957 ORTHO05D006741 2.0e-25 120.6 293 29.7
BolC8t50362H Brassica oleracea HOM05D004957 ORTHO05D006741 2.0e-25 120.6 293 29.7
BraA09t39990Z Brassica rapa HOM05D004957 ORTHO05D006741 2.0e-25 120.6 293 29.7
Nn6g35094 Nelumbo nucifera HOM05D004957 ORTHO05D006741 2.0e-25 120.6 303 30.0
ATR0820G057 Amborella trichopoda HOM05D004957 ORTHO05D006741 2.6e-25 120.2 284 28.5
Sed0021935 Sechium edule HOM05D004957 ORTHO05D006741 5.9e-25 119.0 295 29.5
Ca_16691_v3 Cicer arietinum L. HOM05D004957 ORTHO05D006741 7.7e-25 118.6 290 30.3
FAN10G2184 Fragaria x ananassa HOM05D004957 ORTHO05D006741 7.7e-25 118.6 287 30.7
FAN10G2400 Fragaria x ananassa HOM05D004957 ORTHO05D006741 7.7e-25 118.6 287 30.7
CANSAT56G4280 Cannabis sativa HOM05D004957 ORTHO05D006741 1.0e-24 118.2 287 28.9
Mapoly0006s0044 Marchantia polymorpha HOM05D004957 ORTHO05D006741 1.0e-24 118.2 303 29.7
Oeu026555.1 Olea europaea HOM05D004957 ORTHO05D006741 1.0e-24 118.2 292 28.4
TPR.G17296 Trifolium pratense HOM05D004957 ORTHO05D006741 1.0e-24 118.2 289 29.4
Sp5g10060 Schrenkiella parvula HOM05D004957 ORTHO05D006741 1.3e-24 117.9 297 28.6
HPP92_027323 Vanilla planifolia HOM05D004957 ORTHO05D006741 1.3e-24 117.9 286 29.7
ClCG05G021540 Citrullus lanatus HOM05D004957 ORTHO05D006741 1.7e-24 117.5 294 28.9
Os02g0780600 Oryza sativa ssp. japonica HOM05D004957 ORTHO05D006741 1.7e-24 117.5 282 28.4
Pp3c11_2020 Physcomitrium patens HOM05D004957 ORTHO05D006741 2.2e-24 117.1 297 29.3
Pp3c7_24280 Physcomitrium patens HOM05D004957 ORTHO05D006741 2.9e-24 116.7 296 29.7
Potri.010G233100 Populus trichocarpa HOM05D004957 ORTHO05D006741 2.9e-24 116.7 292 27.7
GSVIVG01034681001 Vitis vinifera HOM05D004957 ORTHO05D006741 2.9e-24 116.7 285 27.4
Carub.0005s1857 Capsella rubella HOM05D004957 ORTHO05D006741 3.8e-24 116.3 288 30.2
CsaV3_5G035710 Cucumis sativus L. HOM05D004957 ORTHO05D006741 3.8e-24 116.3 301 28.9
Prupe.2G205200 Prunus persica HOM05D004957 ORTHO05D006741 3.8e-24 116.3 295 27.8
CSS0009082 Camellia sinensis var. sinensis HOM05D004957 ORTHO05D006741 5.0e-24 115.9 292 27.7
TWI63G0166 Tripterygium wilfordii HOM05D004957 ORTHO05D006741 5.0e-24 115.9 292 27.4
Rhsim03G0109900 Rhododendron simsii HOM05D004957 ORTHO05D006741 6.5e-24 115.5 291 26.5
Atru.chr12.947 Acer truncatum HOM05D004957 ORTHO05D006741 8.5e-24 115.2 292 29.5
Dinv20853 Davidia involucrata HOM05D004957 ORTHO05D006741 8.5e-24 115.2 286 26.9
PGR142G1077 Punica granatum HOM05D004957 ORTHO05D006741 8.5e-24 115.2 293 28.7
Sabra10G0180800 Salix brachista HOM05D004957 ORTHO05D006741 8.5e-24 115.2 292 27.7
Peaxi162Scf00398g00615 Petunia axillaris HOM05D004957 ORTHO05D006741 1.1e-23 114.8 287 28.2
SalBow4G0968 Salvia bowleyana HOM05D004957 ORTHO05D006741 1.1e-23 114.8 296 28.0
TAR623G0871 Trochodendron aralioides HOM05D004957 ORTHO05D006741 1.1e-23 114.8 297 29.0
Lj1g0019138 Lotus japonicus HOM05D004957 ORTHO05D006741 1.4e-23 114.4 292 28.1
RcHm_v2.0_Chr1g0362021 Rosa chinensis HOM05D004957 ORTHO05D006741 1.4e-23 114.4 299 29.1
CSS0009425 Camellia sinensis var. sinensis HOM05D004957 ORTHO05D006741 1.9e-23 114.0 292 27.4
ECA238G1340 Erigeron canadensis HOM05D004957 ORTHO05D006741 1.9e-23 114.0 283 29.3
MD07G1166400 Malus domestica HOM05D004957 ORTHO05D006741 1.9e-23 114.0 295 27.5
Ciclev10031936m.g Citrus clementina HOM05D004957 ORTHO05D006741 2.5e-23 113.6 287 27.5
Duzib128G0241 Durio zibethinus HOM05D004957 ORTHO05D006741 2.5e-23 113.6 296 28.4
COL.COLO4_08828 Corchorus olitorius HOM05D004957 ORTHO05D006741 5.5e-23 112.5 294 26.9
Psat5g077960 Pisum sativum HOM05D004957 ORTHO05D006741 5.5e-23 112.5 288 28.8
Thecc.10G094900 Theobroma cacao HOM05D004957 ORTHO05D006741 5.5e-23 112.5 301 27.9
Sc09g0005630 Simmondsia chinensis HOM05D004957 ORTHO05D006741 7.2e-23 112.1 298 26.8
Sopen11g003560 Solanum pennellii HOM05D004957 ORTHO05D006741 9.4e-23 111.7 292 27.1
Gohir.D10G207400 Gossypium hirsutum HOM05D004957 ORTHO05D006741 1.2e-22 111.3 292 26.7
Gorai.011G233100 Gossypium raimondii HOM05D004957 ORTHO05D006741 1.2e-22 111.3 292 26.7
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.6e-22 110.9 293 28.3
Cfa011211 Carpinus fangiana HOM05D004957 ORTHO05D006741 1.6e-22 110.9 292 29.1
Gohir.A10G199300 Gossypium hirsutum HOM05D004957 ORTHO05D006741 1.6e-22 110.9 292 26.7
Actinidia18565 Actinidia chinensis HOM05D004957 ORTHO05D006741 2.7e-22 110.2 300 27.3
FAN06G3957 Fragaria x ananassa HOM05D004957 ORTHO05D006741 2.7e-22 110.2 303 30.0
PGSC0003DMG400027352 Solanum tuberosum HOM05D004957 ORTHO05D006741 2.7e-22 110.2 292 26.7
CAN.G135.55 Capsicum annuum HOM05D004957 ORTHO05D006741 3.6e-22 109.8 297 26.9
vmacro07214 Vaccinium macrocarpon HOM05D004957 ORTHO05D006741 3.6e-22 109.8 292 26.7
Eucgr.G02721 Eucalyptus grandis HOM05D004957 ORTHO05D006741 4.6e-22 109.4 295 27.5
arahy.Tifrunner.gnm1.ann1.I9WDPE Arachis hypogaea HOM05D004957 ORTHO05D006741 7.9e-22 108.6 289 28.0
MD01G1099500 Malus domestica HOM05D004957 ORTHO05D006741 7.9e-22 108.6 286 27.6
Cc02_g10340 Coffea canephora HOM05D004957 ORTHO05D006741 1.0e-21 108.2 293 28.7
Solyc11g007700.2 Solanum lycopersicum HOM05D004957 ORTHO05D006741 1.0e-21 108.2 292 27.1
FAN06G1723 Fragaria x ananassa HOM05D004957 ORTHO05D006741 3.0e-21 106.7 301 29.6
PSO063G1974 Papaver somniferum HOM05D004957 ORTHO05D006741 3.0e-21 106.7 287 28.6
Phvul.009G055100 Phaseolus vulgaris HOM05D004957 ORTHO05D006741 3.9e-21 106.3 290 28.3
Mapoly0132s0017 Marchantia polymorpha HOM05D004957 ORTHO05D006741 5.1e-21 105.9 303 27.7
Zm00001eb076770 Zea mays HOM05D004957 ORTHO05D006741 8.8e-21 105.1 291 28.2
arahy.Tifrunner.gnm1.ann1.4XHC1Q Arachis hypogaea HOM05D004957 ORTHO05D006741 1.1e-20 104.8 289 27.7
Glyma.04G237200 Glycine max HOM05D004957 ORTHO05D006741 1.5e-20 104.4 289 28.7
PSO339G2013 Papaver somniferum HOM05D004957 ORTHO05D006741 1.5e-20 104.4 289 28.7
Glyma.06G127000 Glycine max HOM05D004957 ORTHO05D006741 3.3e-20 103.2 296 27.0
Medtr3g091140 Medicago truncatula HOM05D004957 ORTHO05D006741 3.3e-20 103.2 289 27.0
Aa31LG10G7310 Aethionema arabicum HOM05D007093 ORTHO05D006741 4.3e-20 102.8 297 29.6
AUR62031261 Chenopodium quinoa HOM05D004957 ORTHO05D006741 4.3e-20 102.8 248 30.2
VMungo1309G2659 Vigna mungo HOM05D004957 ORTHO05D006741 4.3e-20 102.8 291 27.8
AUR62027438 Chenopodium quinoa HOM05D004957 ORTHO05D006741 7.4e-20 102.1 248 31.5
Lsat_1_v5_gn_2_102920 Lactuca sativa HOM05D004957 ORTHO05D006741 1.3e-19 101.3 228 29.8
Manes.10G054300 Manihot esculenta HOM05D004957 ORTHO05D006741 1.7e-19 100.9 262 27.9
SGA_v2.0_scaffold13G06503 Striga asiatica HOM05D004957 ORTHO05D006741 1.7e-19 100.9 259 25.1
Lalb_Chr08g0240391 Lupinus albus HOM05D004957 ORTHO05D006741 2.2e-19 100.5 283 27.9
MBI17_g12066_MAGBIO Magnolia biondii HOM05D004957 ORTHO05D006741 4.8e-19 99.4 215 33.0
unitig_736.g22532 Utricularia gibba HOM05D004957 ORTHO05D006741 2.4e-18 97.1 281 25.6
FvH4_7g18320 Fragaria vesca HOM05D004957 ORTHO05D006741 6.9e-18 95.5 225 29.8
QL04p040536 Quercus lobata HOM05D004957 ORTHO05D006741 2.0e-17 94.0 310 26.8
CiPaw.13G035400 Carya illinoinensis HOM05D004957 ORTHO05D006741 1.7e-16 90.9 282 26.2
Nitab4.5_0000593g0090 Nicotiana tabacum HOM05D004957 ORTHO05D006741 1.4e-15 87.8 251 25.9
DCAR_006375 Daucus carota HOM05D004957 ORTHO05D006741 1.9e-15 87.4 246 26.0
SMO144G0142 Selaginella moellendorffii HOM05D004957 ORTHO05D006741 2.5e-15 87.0 220 27.3
CDE06G1534 Ceratophyllum demersum HOM05D004957 ORTHO05D006741 9.4e-15 85.1 185 29.7
HPP92_011881 Vanilla planifolia HOM05D004957 ORTHO05D006741 1.2e-14 84.7 261 26.8
Nitab4.5_0003408g0080 Nicotiana tabacum HOM05D004957 ORTHO05D006741 6.3e-11 72.4 244 25.8
CBR_g52011 Chara braunii HOM05D004957 ORTHO05D006741 5.9e-09 65.9 182 26.9
PSO541G3797 Papaver somniferum HOM05D003604 ORTHO05D004110 5.0e-08 62.8 300 24.7
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 1.1e-07 61.6 117 31.6
Haze_02635 Corylus avellana HOM05D004957 ORTHO05D006741 4.2e-07 59.7 259 23.2
AUR62034817 Chenopodium quinoa HOM05D003604 ORTHO05D004110 7.2e-07 58.9 266 25.2
FAN24G0344 Fragaria x ananassa HOM05D003604 ORTHO05D004110 4.7e-06 56.2 289 21.5
FAN15G1062 Fragaria x ananassa HOM05D003604 ORTHO05D004110 8.0e-06 55.5 289 21.8
FAN15G2058 Fragaria x ananassa HOM05D003604 ORTHO05D004110 8.0e-06 55.5 289 21.5
FAN22G2085 Fragaria x ananassa HOM05D003604 ORTHO05D004110 8.0e-06 55.5 289 21.8


User provided reference genes

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