Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.8e-257 892.1 467 100.0
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 3.3e-33 147.1 319 32.3
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.2e-32 142.9 304 30.3
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.8e-31 141.4 431 31.3
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 5.3e-31 139.8 319 32.6
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 9.0e-31 139.0 320 32.5
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 1.5e-30 138.3 319 31.0
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 2.0e-30 137.9 323 30.7
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 2.0e-30 137.9 307 30.0
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 3.4e-30 137.1 319 29.5
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 5.8e-30 136.3 318 31.8
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 5.8e-30 136.3 335 29.6
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 5.8e-30 136.3 319 30.7
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 7.6e-30 136.0 307 30.3
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.0e-29 135.6 319 31.0
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.0e-29 135.6 319 30.7
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.3e-29 135.2 303 31.0
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.3e-29 135.2 303 31.0
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.7e-29 134.8 310 31.9
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.2e-29 134.4 319 31.7
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.2e-29 134.4 303 30.7
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.2e-29 134.4 335 29.9
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 2.9e-29 134.0 319 30.1
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 2.9e-29 134.0 319 30.4
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 3.8e-29 133.7 294 29.9
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.8e-29 133.7 304 30.3
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 4.9e-29 133.3 337 31.5
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 4.9e-29 133.3 336 29.5
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 8.4e-29 132.5 303 30.4
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 8.4e-29 132.5 303 30.4
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 8.4e-29 132.5 320 29.4
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.1e-28 132.1 303 30.0
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 1.1e-28 132.1 303 31.0
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.1e-28 132.1 303 30.4
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.1e-28 132.1 303 29.4
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 1.1e-28 132.1 304 30.6
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.4e-28 131.7 305 29.5
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 1.4e-28 131.7 310 31.6
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 3.2e-28 130.6 321 29.0
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 3.2e-28 130.6 303 28.7
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 5.5e-28 129.8 303 29.4
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 5.5e-28 129.8 303 29.4
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 7.1e-28 129.4 319 31.0
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 9.3e-28 129.0 319 29.8
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.2e-27 128.6 303 29.0
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.6e-27 128.3 303 28.7
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.6e-27 128.3 302 28.8
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 2.1e-27 127.9 310 28.4
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.6e-27 126.7 304 30.3
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 4.6e-27 126.7 319 29.8
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 7.9e-27 125.9 315 29.2
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 7.9e-27 125.9 319 30.7
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.3e-26 125.2 262 33.2
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 1.8e-26 124.8 303 30.4
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 3.0e-26 124.0 321 28.3
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 3.9e-26 123.6 305 30.2
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 3.9e-26 123.6 342 27.5
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 3.9e-26 123.6 295 29.5
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 3.9e-26 123.6 313 29.4
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 5.1e-26 123.2 318 28.3
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 5.1e-26 123.2 345 30.4
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.7e-26 122.9 320 29.7
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 1.1e-25 122.1 305 29.2
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.1e-25 122.1 293 30.7
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.5e-25 121.7 313 29.7
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.5e-25 121.7 315 30.2
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 1.9e-25 121.3 293 31.1
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 4.3e-25 120.2 304 28.6
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 4.3e-25 120.2 302 28.5
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 5.7e-25 119.8 315 29.8
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 7.4e-25 119.4 316 28.5
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 9.6e-25 119.0 295 28.5
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.3e-24 118.6 304 28.3
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.3e-24 118.6 304 28.3
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.3e-24 118.6 332 28.9
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.3e-24 118.6 338 29.3
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 1.6e-24 118.2 319 28.2
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.6e-24 118.2 300 31.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 1.6e-24 118.2 345 28.7
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 1.6e-24 118.2 339 29.2
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 2.8e-24 117.5 333 27.9
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 2.8e-24 117.5 319 29.5
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.8e-24 117.5 351 27.9
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 3.7e-24 117.1 304 28.9
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 4.8e-24 116.7 362 27.9
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 4.8e-24 116.7 294 29.6
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 4.8e-24 116.7 317 29.3
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 4.8e-24 116.7 304 28.9
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 6.3e-24 116.3 256 28.5
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 1.8e-23 114.8 287 29.3
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 2.4e-23 114.4 313 28.4
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 4.1e-23 113.6 404 28.2
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 5.3e-23 113.2 295 27.8
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 9.0e-23 112.5 333 29.1
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.2e-22 112.1 321 26.5
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 1.5e-22 111.7 313 29.4
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 2.0e-22 111.3 306 28.4
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 2.6e-22 110.9 285 29.5
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 2.6e-22 110.9 296 27.7
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 7.6e-22 109.4 354 27.7
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.0e-21 109.0 298 28.5
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.0e-21 109.0 320 27.2
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.7e-21 108.2 329 25.5
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 3.8e-21 107.1 282 27.7
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 3.8e-21 107.1 325 25.5
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 5.5e-20 103.2 302 26.8
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 7.2e-20 102.8 318 28.6
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 1.3e-18 98.6 267 27.7
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 3.9e-18 97.1 280 29.3
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 2.8e-16 90.9 438 25.1
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 2.4e-15 87.8 335 23.9
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 3.1e-15 87.4 517 25.5
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 5.3e-15 86.7 234 27.8
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 1.2e-14 85.5 119 38.7
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 7.7e-14 82.8 143 36.4
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.0e-13 82.4 240 25.8
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 6.5e-13 79.7 134 36.6
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 1.4e-12 78.6 130 39.2
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.5e-12 77.8 127 33.1
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 9.4e-12 75.9 285 24.2
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.6e-11 73.9 110 36.4
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 4.6e-11 73.6 160 31.2
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.9e-11 72.8 230 24.8
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 7.9e-11 72.8 230 24.8
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 6.7e-10 69.7 107 34.6
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-09 68.9 254 25.2
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 7.4e-09 66.2 77 40.3
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.2e-08 64.7 82 41.5
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 4.8e-08 63.5 77 39.0
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.3e-08 63.2 75 38.7
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.4e-07 61.2 68 41.2
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.1e-07 60.5 43 58.1


User provided reference genes

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