Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.1e-180 635.6 316 100.0
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.6e-84 317.0 295 56.3
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 7.6e-82 308.1 294 54.1
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 2.2e-81 306.6 294 54.8
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 2.9e-81 306.2 295 54.6
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 3.8e-81 305.8 295 53.9
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 3.8e-81 305.8 294 54.1
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.9e-81 305.4 294 53.4
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 1.1e-80 304.3 294 54.4
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.4e-80 303.9 294 54.4
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.9e-80 303.5 296 54.7
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 3.2e-80 302.8 296 54.7
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 4.2e-80 302.4 296 53.4
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 5.4e-80 302.0 294 54.4
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 5.4e-80 302.0 294 52.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 5.4e-80 302.0 294 54.4
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 7.1e-80 301.6 294 53.1
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 7.1e-80 301.6 294 53.4
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 7.1e-80 301.6 294 53.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 7.1e-80 301.6 296 54.4
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 7.1e-80 301.6 294 54.1
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.3e-80 301.2 294 53.4
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 9.3e-80 301.2 296 54.1
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.2e-79 300.8 296 54.1
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.2e-79 300.8 294 53.4
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.6e-79 300.4 296 53.0
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.6e-79 300.4 296 53.0
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.6e-79 300.4 294 52.4
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 2.1e-79 300.1 296 52.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 2.7e-79 299.7 294 54.1
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 2.7e-79 299.7 294 53.4
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 3.5e-79 299.3 294 52.0
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 3.5e-79 299.3 295 53.6
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 3.5e-79 299.3 297 54.2
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 4.6e-79 298.9 294 53.1
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 4.6e-79 298.9 294 53.7
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 6.0e-79 298.5 296 52.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 7.8e-79 298.1 281 56.9
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.0e-78 297.7 294 52.0
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.0e-78 297.7 294 52.0
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.0e-78 297.7 294 52.0
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.3e-78 297.4 296 53.0
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.3e-78 297.4 295 52.5
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.3e-78 297.4 297 52.9
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.3e-78 297.4 294 52.4
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.3e-78 297.4 294 53.1
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 1.7e-78 297.0 294 52.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.3e-78 296.6 294 51.7
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.3e-78 296.6 294 53.1
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 2.3e-78 296.6 294 52.0
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 3.0e-78 296.2 296 51.7
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 3.0e-78 296.2 294 51.7
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 5.1e-78 295.4 294 52.0
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 5.1e-78 295.4 294 52.0
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 5.1e-78 295.4 294 52.0
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 6.6e-78 295.0 294 51.7
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 6.6e-78 295.0 296 52.7
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 6.6e-78 295.0 294 51.7
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 8.7e-78 294.7 294 52.0
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 8.7e-78 294.7 294 54.1
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 8.7e-78 294.7 294 52.0
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.1e-77 294.3 294 51.7
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.1e-77 294.3 296 51.7
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.1e-77 294.3 296 51.7
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 1.1e-77 294.3 294 51.4
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 1.1e-77 294.3 294 52.4
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 1.5e-77 293.9 294 51.4
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.5e-77 293.9 294 52.7
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 1.5e-77 293.9 294 52.7
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 1.5e-77 293.9 294 51.7
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 1.5e-77 293.9 295 52.2
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.9e-77 293.5 294 51.7
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 2.5e-77 293.1 294 51.4
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.5e-77 293.1 294 51.0
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.5e-77 293.1 294 51.0
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 2.5e-77 293.1 294 52.4
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 3.3e-77 292.7 295 52.2
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 4.3e-77 292.4 294 51.0
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 5.6e-77 292.0 294 50.3
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 5.6e-77 292.0 294 50.3
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 5.6e-77 292.0 294 52.0
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 5.6e-77 292.0 294 51.0
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 7.3e-77 291.6 294 51.0
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 7.3e-77 291.6 285 54.4
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 7.3e-77 291.6 295 52.5
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 7.3e-77 291.6 296 52.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 9.6e-77 291.2 294 51.0
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 9.6e-77 291.2 295 53.6
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.1e-76 290.0 282 53.5
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 2.1e-76 290.0 294 51.4
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 2.8e-76 289.7 294 52.4
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 3.6e-76 289.3 294 51.4
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 3.6e-76 289.3 294 52.7
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 6.2e-76 288.5 294 50.7
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 8.1e-76 288.1 289 50.9
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.1e-75 287.7 294 52.0
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.4e-75 287.3 295 50.5
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 4.0e-75 285.8 295 51.2
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 5.3e-75 285.4 296 52.4
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 9.0e-75 284.6 296 51.4
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 1.2e-74 284.3 278 53.6
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.5e-74 283.9 296 51.4
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.5e-74 283.9 294 52.0
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 3.4e-74 282.7 323 48.6
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 5.8e-74 282.0 296 50.3
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 7.6e-74 281.6 295 51.5
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 9.9e-74 281.2 294 50.7
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 5.4e-72 275.4 295 50.8
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 9.3e-72 274.6 278 52.9
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.2e-71 274.2 305 51.5
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.2e-71 274.2 290 50.7
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.1e-71 273.5 256 53.9
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 7.9e-71 271.6 277 52.0
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 7.9e-71 271.6 302 48.0
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 1.0e-70 271.2 295 49.8
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 1.8e-70 270.4 320 47.2
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 3.0e-70 269.6 316 46.5
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 6.7e-70 268.5 296 49.7
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 6.7e-70 268.5 282 50.4
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 3.1e-67 259.6 220 58.6
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 7.1e-64 248.4 299 45.8
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 7.9e-63 245.0 293 47.4
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.5e-57 225.3 318 46.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 4.1e-51 206.1 179 58.7
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 6.9e-51 205.3 180 57.8
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 9.0e-51 204.9 202 55.0
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.4e-50 203.0 179 58.1
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.5e-49 198.7 331 38.7
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.2e-44 183.7 170 55.3
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.4e-29 132.1 218 37.2
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 9.7e-29 131.7 217 36.9
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 1.2e-26 124.8 173 42.2
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.7e-23 112.8 98 56.1
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.0e-22 111.7 98 55.1
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.8e-20 103.6 92 54.3
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 1.8e-19 100.9 114 48.2
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.5e-13 81.3 74 55.4
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.6e-13 80.5 162 32.7
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.3e-08 63.5 93 44.1


User provided reference genes

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